RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.21■□□□□ 0.51
NFIX-212ENST00000590027 ARMT1Q9H993 441 aa18.21■□□□□ 0.51
NFIX-212ENST00000590027 ECHDC1Q9NTX5 307 aa18.21■□□□□ 0.51
NFIX-212ENST00000590027 SERPINB13Q9UIV8 391 aa18.21■□□□□ 0.51
NFIX-212ENST00000590027 MBD4O95243 580 aa18.2■□□□□ 0.5
NFIX-212ENST00000590027 MTMR2Q13614 643 aa18.2■□□□□ 0.5
NFIX-212ENST00000590027 TTC6Q86TZ1 520 aa18.2■□□□□ 0.5
NFIX-212ENST00000590027 ARMC5Q96C12 935 aa18.2■□□□□ 0.5
NFIX-212ENST00000590027 TRIM47Q96LD4 638 aa18.2■□□□□ 0.5
NFIX-212ENST00000590027 PSMC4P43686 418 aa18.19■□□□□ 0.5
NFIX-212ENST00000590027 PLCD1P51178 756 aa18.19■□□□□ 0.5
NFIX-212ENST00000590027 EVX2Q03828 476 aa18.19■□□□□ 0.5
NFIX-212ENST00000590027 SH3D19Q5HYK7 790 aa18.19■□□□□ 0.5
NFIX-212ENST00000590027 SMCR8Q8TEV9 937 aaPredicted RBP18.19■□□□□ 0.5
NFIX-212ENST00000590027 GPATCH3Q96I76 525 aa18.19■□□□□ 0.5
NFIX-212ENST00000590027 WDR18Q9BV38 432 aa18.19■□□□□ 0.5
NFIX-212ENST00000590027 GINM1Q9NU53 330 aa18.19■□□□□ 0.5
NFIX-212ENST00000590027 TNRC18O15417 2968 aaPredicted RBP18.18■□□□□ 0.5
NFIX-212ENST00000590027 GH2P01242 217 aa18.18■□□□□ 0.5
NFIX-212ENST00000590027 POLR3DP05423 398 aaPredicted RBP18.18■□□□□ 0.5
NFIX-212ENST00000590027 UBE3CQ15386 1083 aa18.18■□□□□ 0.5
NFIX-212ENST00000590027 SLC9C1Q4G0N8 1177 aa18.18■□□□□ 0.5
NFIX-212ENST00000590027 TATDN1Q6P1N9 297 aa18.18■□□□□ 0.5
NFIX-212ENST00000590027 DCP1AQ9NPI6 582 aaPredicted RBP18.18■□□□□ 0.5
NFIX-212ENST00000590027 MCM9Q9NXL9 1143 aa18.18■□□□□ 0.5
NFIX-212ENST00000590027 PNMA3Q9UL41 463 aa18.18■□□□□ 0.5
NFIX-212ENST00000590027 KIAA0100Q14667 2235 aaKnown RBP18.17■□□□□ 0.5
NFIX-212ENST00000590027 BRCA2P51587 3418 aa18.17■□□□□ 0.5
NFIX-212ENST00000590027 PRKAB2O43741 272 aa18.17■□□□□ 0.5
NFIX-212ENST00000590027 FMNL1O95466 1100 aaPredicted RBP18.17■□□□□ 0.5
NFIX-212ENST00000590027 GNRH1P01148 92 aa18.17■□□□□ 0.5
NFIX-212ENST00000590027 OSBPP22059 807 aa18.17■□□□□ 0.5
NFIX-212ENST00000590027 SHMT1P34896 483 aa18.17■□□□□ 0.5
NFIX-212ENST00000590027 BACE1P56817 501 aa18.17■□□□□ 0.5
NFIX-212ENST00000590027 ZNF333Q96JL9 665 aa18.17■□□□□ 0.5
NFIX-212ENST00000590027 SRRDQ9UH36 339 aa18.17■□□□□ 0.5
NFIX-212ENST00000590027 CYP2D6P10635 497 aa18.16■□□□□ 0.5
NFIX-212ENST00000590027 PRMT2P55345 433 aa18.16■□□□□ 0.5
NFIX-212ENST00000590027 FCGRTP55899 365 aa18.16■□□□□ 0.5
NFIX-212ENST00000590027 GABPAQ06546 454 aa18.16■□□□□ 0.5
NFIX-212ENST00000590027 PABPC4Q13310 644 aaKnown RBP eCLIP18.16■□□□□ 0.5
NFIX-212ENST00000590027 TMOD4Q9NZQ9 345 aa18.16■□□□□ 0.5
NFIX-212ENST00000590027 MYPNQ86TC9 1320 aa18.16■□□□□ 0.5
NFIX-212ENST00000590027 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
NFIX-212ENST00000590027 USP17L10C9JJH3 530 aa18.15■□□□□ 0.5
NFIX-212ENST00000590027 CERKLQ49MI3 558 aaPredicted RBP18.15■□□□□ 0.5
NFIX-212ENST00000590027 ZSCAN25Q6NSZ9 544 aa18.15■□□□□ 0.5
NFIX-212ENST00000590027 ANKRD13CQ8N6S4 541 aa18.15■□□□□ 0.5
NFIX-212ENST00000590027 KBTBD3Q8NAB2 608 aa18.15■□□□□ 0.5
NFIX-212ENST00000590027 OTUD7AQ8TE49 926 aaPredicted RBP18.15■□□□□ 0.5
NFIX-212ENST00000590027 SH3TC2Q8TF17 1288 aa18.15■□□□□ 0.5
NFIX-212ENST00000590027 PUS7LQ9H0K6 701 aaKnown RBP18.15■□□□□ 0.5
NFIX-212ENST00000590027 ASCC2Q9H1I8 757 aaPredicted RBP18.15■□□□□ 0.5
NFIX-212ENST00000590027 PRKCZQ05513 592 aa18.14■□□□□ 0.49
NFIX-212ENST00000590027 RAB3GAP1Q15042 981 aa18.14■□□□□ 0.49
NFIX-212ENST00000590027 FAM110CQ1W6H9 321 aa18.14■□□□□ 0.49
NFIX-212ENST00000590027 ABCB5Q2M3G0 1257 aa18.14■□□□□ 0.49
NFIX-212ENST00000590027 SLC44A5Q8NCS7 719 aa18.14■□□□□ 0.49
NFIX-212ENST00000590027 ATP8A2Q9NTI2 1148 aa18.14■□□□□ 0.49
NFIX-212ENST00000590027 DOCK3Q8IZD9 2030 aa18.13■□□□□ 0.49
NFIX-212ENST00000590027 C19orf81C9J6K1 198 aa18.13■□□□□ 0.49
NFIX-212ENST00000590027 HOXD10P28358 340 aa18.13■□□□□ 0.49
NFIX-212ENST00000590027 IRX3P78415 501 aaPredicted RBP18.13■□□□□ 0.49
NFIX-212ENST00000590027 ZYXQ15942 572 aaKnown RBP18.13■□□□□ 0.49
NFIX-212ENST00000590027 FEZ1Q99689 392 aa18.13■□□□□ 0.49
NFIX-212ENST00000590027 PDE4DIPQ5VU43 2346 aa18.13■□□□□ 0.49
NFIX-212ENST00000590027 TTC41PQ6P2S7 1318 aa18.13■□□□□ 0.49
NFIX-212ENST00000590027 CYP2D7A0A087X1C5 515 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 MYCP01106 439 aaPredicted RBP18.12■□□□□ 0.49
NFIX-212ENST00000590027 GUCY1A2P33402 732 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 GCLCP48506 637 aaPredicted RBP18.12■□□□□ 0.49
NFIX-212ENST00000590027 USP17L2Q6R6M4 530 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 NBPF11Q86T75 865 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 PI4K2BQ8TCG2 481 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 RAET1EQ8TD07 263 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 DYNLL2Q96FJ2 89 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 CABP5Q9NP86 173 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 EMILIN3Q9NT22 766 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 GABRQQ9UN88 632 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 SLC4A4Q9Y6R1 1079 aa18.12■□□□□ 0.49
NFIX-212ENST00000590027 SMIM22K7EJ46 135 aa18.11■□□□□ 0.49
NFIX-212ENST00000590027 TNPO2O14787 897 aaKnown RBP18.11■□□□□ 0.49
NFIX-212ENST00000590027 HOXA7P31268 230 aaPredicted RBP18.11■□□□□ 0.49
NFIX-212ENST00000590027 ACER1Q8TDN7 264 aa18.11■□□□□ 0.49
NFIX-212ENST00000590027 APPBP2Q92624 585 aa18.11■□□□□ 0.49
NFIX-212ENST00000590027 C12orf42Q96LP6 360 aa18.11■□□□□ 0.49
NFIX-212ENST00000590027 SALL3Q9BXA9 1300 aa18.11■□□□□ 0.49
NFIX-212ENST00000590027 MPHOSPH10O00566 681 aaKnown RBP18.1■□□□□ 0.49
NFIX-212ENST00000590027 ERC2O15083 957 aa18.1■□□□□ 0.49
NFIX-212ENST00000590027 MX1P20591 662 aa18.1■□□□□ 0.49
NFIX-212ENST00000590027 GRK4P32298 578 aa18.1■□□□□ 0.49
NFIX-212ENST00000590027 SEPT2Q15019 361 aa18.1■□□□□ 0.49
NFIX-212ENST00000590027 OSBP2Q969R2 916 aa18.1■□□□□ 0.49
NFIX-212ENST00000590027 SWAP70Q9UH65 585 aa18.1■□□□□ 0.49
NFIX-212ENST00000590027 PLXNB2O15031 1838 aa18.09■□□□□ 0.49
NFIX-212ENST00000590027 MKI67P46013 3256 aaKnown RBP18.09■□□□□ 0.49
NFIX-212ENST00000590027 USP17L12C9JPN9 530 aa18.09■□□□□ 0.49
NFIX-212ENST00000590027 USP17L21D6R901 530 aa18.09■□□□□ 0.49
NFIX-212ENST00000590027 RNF113AO15541 343 aaKnown RBP18.09■□□□□ 0.49
NFIX-212ENST00000590027 GLRX3O76003 335 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms