RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 HOXA7P31268 230 aaPredicted RBP15.84■□□□□ 0.13
PRKCSH-210ENST00000589990 ERVK-9P63128 1117 aa15.84■□□□□ 0.13
PRKCSH-210ENST00000589990 ERVK-24P63145 666 aa15.84■□□□□ 0.13
PRKCSH-210ENST00000589990 C9orf50Q5SZB4 431 aa15.84■□□□□ 0.13
PRKCSH-210ENST00000589990 ZNF697Q5TEC3 545 aa15.84■□□□□ 0.13
PRKCSH-210ENST00000589990 SH3RF3Q8TEJ3 882 aaPredicted RBP15.84■□□□□ 0.13
PRKCSH-210ENST00000589990 WDR18Q9BV38 432 aa15.84■□□□□ 0.13
PRKCSH-210ENST00000589990 HMG20BQ9P0W2 317 aa15.84■□□□□ 0.13
PRKCSH-210ENST00000589990 CDK5RAP2Q96SN8 1893 aa15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 GDF11O95390 407 aa15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 UBTFL1P0CB47 393 aaPredicted RBP15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 TFCP2Q12800 502 aa15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 PDE3AQ14432 1141 aa15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 SHHQ15465 462 aa15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 SPTY2D1Q68D10 685 aaPredicted RBP15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 TEX11Q8IYF3 940 aa15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 MAFAQ8NHW3 353 aaPredicted RBP15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 LBHD1Q9BQE6 289 aaPredicted RBP15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 AS3MTQ9HBK9 375 aa15.83■□□□□ 0.12
PRKCSH-210ENST00000589990 CNMDO75829 334 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 MAPK4P31152 587 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 RGS2P41220 211 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 PLEKHH3Q7Z736 793 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 MYLIPQ8WY64 445 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 APBA2Q99767 749 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 TBC1D2Q9BYX2 928 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 TTYH1Q9H313 450 aaPredicted RBP15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 SEMA6BQ9H3T3 888 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 COPRSQ9NQ92 184 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 PRDM6Q9NQX0 595 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 EMILIN3Q9NT22 766 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 TMOD4Q9NZQ9 345 aa15.82■□□□□ 0.12
PRKCSH-210ENST00000589990 FAM9BQ8IZU0 186 aa15.81■□□□□ 0.12
PRKCSH-210ENST00000589990 TRPV1Q8NER1 839 aa15.81■□□□□ 0.12
PRKCSH-210ENST00000589990 RAI14Q9P0K7 980 aa15.81■□□□□ 0.12
PRKCSH-210ENST00000589990 HERC5Q9UII4 1024 aaKnown RBP15.81■□□□□ 0.12
PRKCSH-210ENST00000589990 RLFQ13129 1914 aa15.8■□□□□ 0.12
PRKCSH-210ENST00000589990 ZNF316A6NFI3 1004 aaPredicted RBP15.8■□□□□ 0.12
PRKCSH-210ENST00000589990 RTP1P59025 263 aa15.8■□□□□ 0.12
PRKCSH-210ENST00000589990 MAP2K5Q13163 448 aa15.8■□□□□ 0.12
PRKCSH-210ENST00000589990 ADGRA1Q86SQ6 560 aa15.8■□□□□ 0.12
PRKCSH-210ENST00000589990 MAPKAPK5Q8IW41 473 aa15.8■□□□□ 0.12
PRKCSH-210ENST00000589990 TRMT44Q8IYL2 757 aaKnown RBP15.8■□□□□ 0.12
PRKCSH-210ENST00000589990 SPATA5Q8NB90 893 aa15.8■□□□□ 0.12
PRKCSH-210ENST00000589990 MEIS3Q99687 375 aa15.8■□□□□ 0.12
PRKCSH-210ENST00000589990 USP17L10C9JJH3 530 aa15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 ASNSP08243 561 aa15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 CNGA1P29973 690 aa15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 CYP2C19P33261 490 aa15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 NPLOC4Q8TAT6 608 aa15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 EDC3Q96F86 508 aaKnown RBP15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 NEUROD6Q96NK8 337 aa15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 AATFQ9NY61 560 aaKnown RBP eCLIP15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 PI4KBQ9UBF8 816 aa15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 DDX20Q9UHI6 824 aaKnown RBP15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 PALD1Q9ULE6 856 aa15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 ZBTB21Q9ULJ3 1066 aa15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 ATP11BQ9Y2G3 1177 aa15.79■□□□□ 0.12
PRKCSH-210ENST00000589990 MYO5AQ9Y4I1 1855 aaKnown RBP15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 FOCADQ5VW36 1801 aa15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 MCAMP43121 646 aa15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 GSTO1P78417 241 aa15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 MVPQ14764 893 aaKnown RBP15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 ZYXQ15942 572 aaKnown RBP15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 GJC2Q5T442 439 aaPredicted RBP15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 ANO1Q5XXA6 986 aa15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 SH3RF1Q7Z6J0 888 aa15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 TGFBRAP1Q8WUH2 860 aa15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 BADQ92934 168 aa15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 RAPGEFL1Q9UHV5 662 aa15.78■□□□□ 0.12
PRKCSH-210ENST00000589990 FLT1P17948 1338 aa15.77■□□□□ 0.12
PRKCSH-210ENST00000589990 C19orf81C9J6K1 198 aa15.77■□□□□ 0.12
PRKCSH-210ENST00000589990 LDHCP07864 332 aa15.77■□□□□ 0.12
PRKCSH-210ENST00000589990 WDR78Q5VTH9 848 aa15.77■□□□□ 0.12
PRKCSH-210ENST00000589990 METTL16Q86W50 562 aaKnown RBP15.77■□□□□ 0.12
PRKCSH-210ENST00000589990 LPAR1Q92633 364 aa15.77■□□□□ 0.12
PRKCSH-210ENST00000589990 PRDM5Q9NQX1 630 aaPredicted RBP15.77■□□□□ 0.12
PRKCSH-210ENST00000589990 SNRKQ9NRH2 765 aa15.77■□□□□ 0.12
PRKCSH-210ENST00000589990 BTBD7Q9P203 1132 aa15.77■□□□□ 0.12
PRKCSH-210ENST00000589990 SAP30BPQ9UHR5 308 aaKnown RBP15.77■□□□□ 0.12
PRKCSH-210ENST00000589990 DNM1LO00429 736 aa15.76■□□□□ 0.11
PRKCSH-210ENST00000589990 MAP4K4O95819 1239 aaPredicted RBP15.76■□□□□ 0.11
PRKCSH-210ENST00000589990 IGHA2P01877 340 aa15.76■□□□□ 0.11
PRKCSH-210ENST00000589990 PTPREP23469 700 aa15.76■□□□□ 0.11
PRKCSH-210ENST00000589990 ARID4AP29374 1257 aaPredicted RBP15.76■□□□□ 0.11
PRKCSH-210ENST00000589990 MFSD14CQ5VZR4 134 aa15.76■□□□□ 0.11
PRKCSH-210ENST00000589990 USP38Q8NB14 1042 aa15.76■□□□□ 0.11
PRKCSH-210ENST00000589990 CWC22Q9HCG8 908 aaKnown RBP15.76■□□□□ 0.11
PRKCSH-210ENST00000589990 SMC4Q9NTJ3 1288 aa15.76■□□□□ 0.11
PRKCSH-210ENST00000589990 GH2P01242 217 aa15.75■□□□□ 0.11
PRKCSH-210ENST00000589990 ITGB8P26012 769 aa15.75■□□□□ 0.11
PRKCSH-210ENST00000589990 TRIM60Q495X7 471 aa15.75■□□□□ 0.11
PRKCSH-210ENST00000589990 USP17L2Q6R6M4 530 aa15.75■□□□□ 0.11
PRKCSH-210ENST00000589990 CRACR2BQ8N4Y2 399 aaPredicted RBP15.75■□□□□ 0.11
PRKCSH-210ENST00000589990 DHX36Q9H2U1 1008 aaKnown RBP15.75■□□□□ 0.11
PRKCSH-210ENST00000589990 LRP2BPQ9P2M1 347 aa15.75■□□□□ 0.11
PRKCSH-210ENST00000589990 PRKAG2Q9UGJ0 569 aa15.75■□□□□ 0.11
PRKCSH-210ENST00000589990 NOB1Q9ULX3 412 aaKnown RBP15.75■□□□□ 0.11
PRKCSH-210ENST00000589990 RABGAP1Q9Y3P9 1069 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms