RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 RXRAP19793 462 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 APBB1IPQ7Z5R6 666 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 CCDC65Q8IXS2 484 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 TRMT44Q8IYL2 757 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 IFNL2Q8IZJ0 200 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 CDC5LQ99459 802 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 PALD1Q9ULE6 856 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 A0A1W2PQ27 194 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 A0A1W2PQ64 194 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 A0A1W2PQD8 194 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 CFAP157Q5JU67 520 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 HHATQ5VTY9 493 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 KRT40Q6A162 431 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 ARMC9Q7Z3E5 817 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 STAG1Q8WVM7 1258 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 STX8Q9UNK0 236 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 SBNO2Q9Y2G9 1366 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 TSPY3P0CV98 308 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 TSPY8P0CW00 308 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 USP28Q96RU2 1077 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 IKBKBO14920 756 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 CLTAP09496 248 aa16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 JPH2Q9BR39 696 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-214ENST00000589677 UHRF1BP1LA0JNW5 1464 aa16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 CD2BP2O95400 341 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 GUCY2FP51841 1108 aa16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 E2F4Q16254 413 aa16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 TRIM68Q6AZZ1 485 aa16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 OTUD7BQ6GQQ9 843 aa16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 TRIM31Q9BZY9 425 aa16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 BICC1Q9H694 974 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 TNFAIP3P21580 790 aa16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 PSMB7Q99436 277 aa16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 IRX4P78413 519 aa16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 IFT88Q13099 833 aa16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 ZNF274Q96GC6 653 aaPredicted RBP16.25■□□□□ 0.19
SMARCA4-214ENST00000589677 SMIM24O75264 130 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 PPP2R5AQ15172 486 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 ZKSCAN8Q15776 578 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 TADA2BQ86TJ2 420 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 FANCLQ9NW38 375 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 AKAP4Q5JQC9 854 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 G2E3Q7L622 706 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 ACEP12821 1306 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 SPOPO43791 374 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 STX2P32856 288 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 ERCC5P28715 1186 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 TRAF1Q13077 416 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 TMEM87AQ8NBN3 555 aa16.24■□□□□ 0.19
SMARCA4-214ENST00000589677 FLOT1O75955 427 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 EPHB4P54760 987 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 GSTO1P78417 241 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 SFMBT2Q5VUG0 894 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 CCDC197Q8NCU1 140 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 CHAMP1Q96JM3 812 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 SERTAD1Q9UHV2 236 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 SPATA31E1Q6ZUB1 1445 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 RAD51AP2Q09MP3 1159 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 PEX26Q7Z412 305 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 N4BP2L2Q92802 583 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 TPCN1Q9ULQ1 816 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 SAMD9Q5K651 1589 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 NDC80O14777 642 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 PFKFB2O60825 505 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 EPB41P11171 864 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 GJC1P36383 396 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 TTC38Q5R3I4 469 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 ANKRD20A3Q5VUR7 823 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 PLIN2Q99541 437 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 NAP1L4Q99733 375 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 PCDHA7Q9UN72 937 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 MAPK8IP1Q9UQF2 711 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 PNMA6EA0A0J9YXQ4 647 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 CHL1O00533 1208 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 BEND3Q5T5X7 828 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 RRP36Q96EU6 259 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 TMOD2Q9NZR1 351 aa16.23■□□□□ 0.19
SMARCA4-214ENST00000589677 KIF1CO43896 1103 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 CWF19L2Q2TBE0 894 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 KDM5DQ9BY66 1539 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 TPD52P55327 224 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 TNNI3KQ59H18 835 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 SPATA1Q5VX52 437 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 RPUSD2Q8IZ73 545 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 ADAM21Q9UKJ8 722 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 RABGAP1Q9Y3P9 1069 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 EPN1Q9Y6I3 576 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 FPGT-TNNI3KV9GXZ4 949 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 KCNJ18B7U540 433 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 HGSO14964 777 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 FAM13AO94988 1023 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 PSMC4P43686 418 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 DNM2P50570 870 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 KLHL30Q0D2K2 578 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 KCNJ12Q14500 433 aa16.22■□□□□ 0.19
SMARCA4-214ENST00000589677 INF2Q27J81 1249 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms