RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CCDC196A0A1B0GTZ2 297 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 A0A1W2PQ27 194 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 A0A1W2PQ64 194 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 A0A1W2PQD8 194 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 KDM4AO75164 1064 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 HIBADHP31937 336 aaKnown RBP11.55□□□□□ -0.56
VPS25-202ENST00000589219 KIF23Q02241 960 aaPredicted RBP11.55□□□□□ -0.56
VPS25-202ENST00000589219 CTDSPL2Q05D32 466 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 TYRO3Q06418 890 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 TRIM29Q14134 588 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 WTAPQ15007 396 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 PPP2R5BQ15173 497 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 COL13A1Q5TAT6 717 aaPredicted RBP11.55□□□□□ -0.56
VPS25-202ENST00000589219 MAP1SQ66K74 1059 aaPredicted RBP11.55□□□□□ -0.56
VPS25-202ENST00000589219 SPTY2D1Q68D10 685 aaPredicted RBP11.55□□□□□ -0.56
VPS25-202ENST00000589219 USP50Q70EL3 339 aaPredicted RBP11.55□□□□□ -0.56
VPS25-202ENST00000589219 MICU3Q86XE3 530 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 MIGA1Q8NAN2 632 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 MRPS27Q92552 414 aaKnown RBP11.55□□□□□ -0.56
VPS25-202ENST00000589219 ESR2Q92731 530 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 ALG1Q9BT22 464 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 ABCF2Q9UG63 623 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 ZNRF3Q9ULT6 936 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 TAF1P21675 1872 aa11.55□□□□□ -0.56
VPS25-202ENST00000589219 PRKAB2O43741 272 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 FMNL1O95466 1100 aaPredicted RBP11.54□□□□□ -0.56
VPS25-202ENST00000589219 IFNAR1P17181 557 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 SCNN1DP51172 638 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 GUCY1B3Q02153 619 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 FAM160A1Q05DH4 1040 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 TNIP1Q15025 636 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 STK38Q15208 465 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 RTN1Q16799 776 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 TPRNQ4KMQ1 711 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 MYSM1Q5VVJ2 828 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 SASS6Q6UVJ0 657 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 CCAR1Q8IX12 1150 aaKnown RBP11.54□□□□□ -0.56
VPS25-202ENST00000589219 UBAC1Q9BSL1 405 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 NOL7Q9UMY1 257 aaKnown RBP11.54□□□□□ -0.56
VPS25-202ENST00000589219 LEMD3Q9Y2U8 911 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 IRS2Q9Y4H2 1338 aa11.54□□□□□ -0.56
VPS25-202ENST00000589219 TRPM7Q96QT4 1865 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 KINO60870 393 aaKnown RBP11.53□□□□□ -0.56
VPS25-202ENST00000589219 NR1I2O75469 434 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 PTMAP06454 111 aaKnown RBP11.53□□□□□ -0.56
VPS25-202ENST00000589219 EPS15P42566 896 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 ME1P48163 572 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 SSRP1Q08945 709 aaKnown RBP11.53□□□□□ -0.56
VPS25-202ENST00000589219 KIAA2012Q0VF49 1180 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 SF3A1Q15459 793 aaKnown RBP11.53□□□□□ -0.56
VPS25-202ENST00000589219 NTRK3Q16288 839 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 C15orf52Q6ZUT6 534 aaKnown RBP11.53□□□□□ -0.56
VPS25-202ENST00000589219 ADGRA1Q86SQ6 560 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 TRIM22Q8IYM9 498 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 TNS4Q8IZW8 715 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 FSIP1Q8NA03 581 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 NSUN4Q96CB9 384 aaKnown RBP11.53□□□□□ -0.56
VPS25-202ENST00000589219 CRNKL1Q9BZJ0 848 aaKnown RBP11.53□□□□□ -0.56
VPS25-202ENST00000589219 ADARB2Q9NS39 739 aaKnown RBP11.53□□□□□ -0.56
VPS25-202ENST00000589219 TOMM22Q9NS69 142 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 ZSWIM5Q9P217 1185 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 ARPP21Q9UBL0 812 aaPredicted RBP11.53□□□□□ -0.56
VPS25-202ENST00000589219 USP25Q9UHP3 1055 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 IQSEC3Q9UPP2 1182 aaPredicted RBP11.53□□□□□ -0.56
VPS25-202ENST00000589219 ZKSCAN5Q9Y2L8 839 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 MRVI1Q9Y6F6 885 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 XDHP47989 1333 aa11.53□□□□□ -0.56
VPS25-202ENST00000589219 LRRC37AA6NMS7 1700 aa11.52□□□□□ -0.56
VPS25-202ENST00000589219 SLC3A2P08195 630 aaKnown RBP11.52□□□□□ -0.57
VPS25-202ENST00000589219 FGRP09769 529 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 CDC27P30260 824 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 CXCL9Q07325 125 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 STX1AQ16623 288 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 DEFB115Q30KQ5 88 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 RRP12Q5JTH9 1297 aaKnown RBP11.52□□□□□ -0.57
VPS25-202ENST00000589219 KRT40Q6A162 431 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 ADALQ6DHV7 355 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 CIAPIN1Q6FI81 312 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 RAB11FIP4Q86YS3 637 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 CERS3Q8IU89 383 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 LINC00301Q8NCQ3 95 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 ATP8A2Q9NTI2 1148 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 GPRC5DQ9NZD1 345 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 TACC3Q9Y6A5 838 aa11.52□□□□□ -0.57
VPS25-202ENST00000589219 RASSF10A6NK89 507 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 KIF28PB7ZC32 967 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 SPTLC2O15270 562 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 ORC4O43929 436 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 ZNF500O60304 480 aaPredicted RBP11.51□□□□□ -0.57
VPS25-202ENST00000589219 RANBP6O60518 1105 aaKnown RBP11.51□□□□□ -0.57
VPS25-202ENST00000589219 DDAH1O94760 285 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 DEXIO95424 95 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 TPM3P06753 285 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 CALM1P0DP23 149 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 CALM2P0DP24 149 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 CALM3P0DP25 149 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 VEGFBP49765 207 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 GSTO1P78417 241 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms