RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 HMGCS2P54868 508 aa23.16■■□□□ 1.3
CIRBP-221ENST00000589161 BACE1P56817 501 aa23.16■■□□□ 1.3
CIRBP-221ENST00000589161 CAP1Q01518 475 aa23.16■■□□□ 1.3
CIRBP-221ENST00000589161 PABPC4Q13310 644 aaKnown RBP eCLIP23.16■■□□□ 1.3
CIRBP-221ENST00000589161 LRRFIP1Q32MZ4 808 aaKnown RBP23.16■■□□□ 1.3
CIRBP-221ENST00000589161 CERKLQ49MI3 558 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-221ENST00000589161 DDRGK1Q96HY6 314 aa23.16■■□□□ 1.3
CIRBP-221ENST00000589161 PNMA3Q9UL41 463 aa23.16■■□□□ 1.3
CIRBP-221ENST00000589161 TAOK2Q9UL54 1235 aa23.16■■□□□ 1.3
CIRBP-221ENST00000589161 SIPA1L1O43166 1804 aa23.16■■□□□ 1.3
CIRBP-221ENST00000589161 C19orf81C9J6K1 198 aa23.15■■□□□ 1.3
CIRBP-221ENST00000589161 GH2P01242 217 aa23.15■■□□□ 1.3
CIRBP-221ENST00000589161 SMCR8Q8TEV9 937 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-221ENST00000589161 RWDD1Q9H446 243 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-221ENST00000589161 PHIPQ8WWQ0 1821 aa23.15■■□□□ 1.3
CIRBP-221ENST00000589161 MYH1P12882 1939 aa23.14■■□□□ 1.3
CIRBP-221ENST00000589161 USP17L10C9JJH3 530 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 PRKAB2O43741 272 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 CHGBP05060 677 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 ZFYP08048 801 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-221ENST00000589161 BCRP11274 1271 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 MX1P20591 662 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 GABPAQ06546 454 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 MTMR2Q13614 643 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 TREML2Q5T2D2 321 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 AMOTL1Q8IY63 956 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 PUS7LQ9H0K6 701 aaKnown RBP23.14■■□□□ 1.29
CIRBP-221ENST00000589161 CABP5Q9NP86 173 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 TMOD4Q9NZQ9 345 aa23.14■■□□□ 1.29
CIRBP-221ENST00000589161 RNF113AO15541 343 aaKnown RBP23.13■■□□□ 1.29
CIRBP-221ENST00000589161 OSBPP22059 807 aa23.13■■□□□ 1.29
CIRBP-221ENST00000589161 SHMT1P34896 483 aa23.13■■□□□ 1.29
CIRBP-221ENST00000589161 PRMT2P55345 433 aa23.13■■□□□ 1.29
CIRBP-221ENST00000589161 ABCB5Q2M3G0 1257 aa23.13■■□□□ 1.29
CIRBP-221ENST00000589161 SHROOM1Q2M3G4 852 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-221ENST00000589161 PI4K2BQ8TCG2 481 aa23.13■■□□□ 1.29
CIRBP-221ENST00000589161 OTUD7AQ8TE49 926 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-221ENST00000589161 ARHGAP39Q9C0H5 1083 aa23.13■■□□□ 1.29
CIRBP-221ENST00000589161 SLC4A4Q9Y6R1 1079 aa23.13■■□□□ 1.29
CIRBP-221ENST00000589161 HOXD10P28358 340 aa23.12■■□□□ 1.29
CIRBP-221ENST00000589161 PSMC4P43686 418 aa23.12■■□□□ 1.29
CIRBP-221ENST00000589161 APPBP2Q92624 585 aa23.12■■□□□ 1.29
CIRBP-221ENST00000589161 SWAP70Q9UH65 585 aa23.12■■□□□ 1.29
CIRBP-221ENST00000589161 SUPT16HQ9Y5B9 1047 aaKnown RBP23.12■■□□□ 1.29
CIRBP-221ENST00000589161 FMNL1O95466 1100 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-221ENST00000589161 RAB3GAP1Q15042 981 aa23.11■■□□□ 1.29
CIRBP-221ENST00000589161 EXOC6Q8TAG9 804 aa23.11■■□□□ 1.29
CIRBP-221ENST00000589161 ATAD5Q96QE3 1844 aa23.1■■□□□ 1.29
CIRBP-221ENST00000589161 SOX10P56693 466 aa23.1■■□□□ 1.29
CIRBP-221ENST00000589161 STRBPQ96SI9 672 aaKnown RBP23.1■■□□□ 1.29
CIRBP-221ENST00000589161 USP17L12C9JPN9 530 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 USP17L21D6R901 530 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 CYP2D6P10635 497 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 HOXA7P31268 230 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-221ENST00000589161 GCLCP48506 637 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-221ENST00000589161 FCGRTP55899 365 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 C12orf60Q5U649 245 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 USP17L2Q6R6M4 530 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 NBPF11Q86T75 865 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 OSBP2Q969R2 916 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 TRIM47Q96LD4 638 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 ASCC2Q9H1I8 757 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-221ENST00000589161 STAP2Q9UGK3 403 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 PTCH2Q9Y6C5 1203 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 PTPRFP10586 1907 aa23.09■■□□□ 1.29
CIRBP-221ENST00000589161 SALL3Q9BXA9 1300 aa23.08■■□□□ 1.29
CIRBP-221ENST00000589161 CTGFP29279 349 aa23.08■■□□□ 1.29
CIRBP-221ENST00000589161 MLLT1Q03111 559 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-221ENST00000589161 ARMC5Q96C12 935 aa23.08■■□□□ 1.29
CIRBP-221ENST00000589161 SRRDQ9UH36 339 aa23.08■■□□□ 1.29
CIRBP-221ENST00000589161 MPHOSPH10O00566 681 aaKnown RBP23.07■■□□□ 1.28
CIRBP-221ENST00000589161 ECM2O94769 699 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-221ENST00000589161 GNAT2P19087 354 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 USP14P54578 494 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 IRX3P78415 501 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-221ENST00000589161 EVX2Q03828 476 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 SLC9C1Q4G0N8 1177 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 GIMAP6Q6P9H5 292 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 SMC5Q8IY18 1101 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 ANKRD13CQ8N6S4 541 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 DYNLL2Q96FJ2 89 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 FEZ1Q99689 392 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 FSD1Q9BTV5 496 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 EMILIN3Q9NT22 766 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 DDX60LQ5H9U9 1706 aaKnown RBP23.07■■□□□ 1.28
CIRBP-221ENST00000589161 NAV1Q8NEY1 1877 aa23.07■■□□□ 1.28
CIRBP-221ENST00000589161 PDE1AP54750 535 aa23.06■■□□□ 1.28
CIRBP-221ENST00000589161 FAM110CQ1W6H9 321 aa23.06■■□□□ 1.28
CIRBP-221ENST00000589161 CTR9Q6PD62 1173 aa23.06■■□□□ 1.28
CIRBP-221ENST00000589161 KIAA1683Q9H0B3 1180 aa23.06■■□□□ 1.28
CIRBP-221ENST00000589161 ARPP21Q9UBL0 812 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-221ENST00000589161 GPAA1O43292 621 aa23.05■■□□□ 1.28
CIRBP-221ENST00000589161 GUCY1A2P33402 732 aa23.05■■□□□ 1.28
CIRBP-221ENST00000589161 SEPT2Q15019 361 aa23.05■■□□□ 1.28
CIRBP-221ENST00000589161 TMEM179Q6ZVK1 233 aa23.05■■□□□ 1.28
CIRBP-221ENST00000589161 SLC44A5Q8NCS7 719 aa23.05■■□□□ 1.28
CIRBP-221ENST00000589161 C12orf42Q96LP6 360 aa23.05■■□□□ 1.28
CIRBP-221ENST00000589161 CCDC17Q96LX7 622 aa23.05■■□□□ 1.28
CIRBP-221ENST00000589161 MYH7P12883 1935 aa23.05■■□□□ 1.28
CIRBP-221ENST00000589161 LOC285556D6RIA3 1793 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms