RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 RAG1P15918 1043 aa10.39□□□□□ -0.75
VMP1-208ENST00000588617 POU3F3P20264 500 aaPredicted RBP10.39□□□□□ -0.75
VMP1-208ENST00000588617 C12orf40Q86WS4 652 aa10.39□□□□□ -0.75
VMP1-208ENST00000588617 VWA5B2Q8N398 1253 aa10.39□□□□□ -0.75
VMP1-208ENST00000588617 IPO9Q96P70 1041 aaKnown RBP10.39□□□□□ -0.75
VMP1-208ENST00000588617 PSMD1Q99460 953 aa10.39□□□□□ -0.75
VMP1-208ENST00000588617 TCEAL9Q9UHQ7 104 aa10.39□□□□□ -0.75
VMP1-208ENST00000588617 CSADQ9Y600 493 aa10.39□□□□□ -0.75
VMP1-208ENST00000588617 LINC01387J3KSC0 135 aa10.38□□□□□ -0.75
VMP1-208ENST00000588617 RAPGEF3O95398 923 aa10.38□□□□□ -0.75
VMP1-208ENST00000588617 ADH6P28332 368 aa10.38□□□□□ -0.75
VMP1-208ENST00000588617 GRK4P32298 578 aa10.38□□□□□ -0.75
VMP1-208ENST00000588617 WNT8BQ93098 351 aa10.38□□□□□ -0.75
VMP1-208ENST00000588617 CCDC136Q96JN2 1154 aa10.38□□□□□ -0.75
VMP1-208ENST00000588617 KIF2CQ99661 725 aa10.38□□□□□ -0.75
VMP1-208ENST00000588617 MCM8Q9UJA3 840 aa10.38□□□□□ -0.75
VMP1-208ENST00000588617 CCDC194A0A1B0GVG4 234 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 PLD2O14939 933 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 ARAFP10398 606 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 FAM50AQ14320 339 aaKnown RBP10.37□□□□□ -0.75
VMP1-208ENST00000588617 FAM209AQ5JX71 171 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 WDR89Q96FK6 387 aaPredicted RBP10.37□□□□□ -0.75
VMP1-208ENST00000588617 EXOC2Q96KP1 924 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 DHRS4Q9BTZ2 278 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 NRSN2Q9GZP1 204 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 NCOA5Q9HCD5 579 aaKnown RBP10.37□□□□□ -0.75
VMP1-208ENST00000588617 OSGEPQ9NPF4 335 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 GABBR1Q9UBS5 961 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 ADAM30Q9UKF2 790 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 THRAP3Q9Y2W1 955 aaKnown RBP10.37□□□□□ -0.75
VMP1-208ENST00000588617 EID1Q9Y6B2 187 aa10.37□□□□□ -0.75
VMP1-208ENST00000588617 ALG1L2C9J202 215 aa10.36□□□□□ -0.75
VMP1-208ENST00000588617 CTSBP07858 339 aa10.36□□□□□ -0.75
VMP1-208ENST00000588617 MX2P20592 715 aa10.36□□□□□ -0.75
VMP1-208ENST00000588617 POLR2BP30876 1174 aaKnown RBP10.36□□□□□ -0.75
VMP1-208ENST00000588617 ETF1P62495 437 aaKnown RBP10.36□□□□□ -0.75
VMP1-208ENST00000588617 BBS9Q3SYG4 887 aa10.36□□□□□ -0.75
VMP1-208ENST00000588617 FNDC3BQ53EP0 1204 aaKnown RBP10.36□□□□□ -0.75
VMP1-208ENST00000588617 SV2AQ7L0J3 742 aa10.36□□□□□ -0.75
VMP1-208ENST00000588617 KISS1RQ969F8 398 aaPredicted RBP10.36□□□□□ -0.75
VMP1-208ENST00000588617 A0A1W2PQU0 124 aa10.35□□□□□ -0.75
VMP1-208ENST00000588617 NAT2P11245 290 aa10.35□□□□□ -0.75
VMP1-208ENST00000588617 CCNFP41002 786 aa10.35□□□□□ -0.75
VMP1-208ENST00000588617 KIF4BQ2VIQ3 1234 aa10.35□□□□□ -0.75
VMP1-208ENST00000588617 AXDND1Q5T1B0 1012 aaPredicted RBP10.35□□□□□ -0.75
VMP1-208ENST00000588617 ACSF2Q96CM8 615 aaPredicted RBP10.35□□□□□ -0.75
VMP1-208ENST00000588617 DHRS1Q96LJ7 313 aa10.35□□□□□ -0.75
VMP1-208ENST00000588617 RUSC1Q9BVN2 902 aa10.35□□□□□ -0.75
VMP1-208ENST00000588617 FAM86C1Q9NVL1 165 aa10.35□□□□□ -0.75
VMP1-208ENST00000588617 LRP2BPQ9P2M1 347 aa10.35□□□□□ -0.75
VMP1-208ENST00000588617 MRPS23Q9Y3D9 190 aaKnown RBP10.35□□□□□ -0.75
VMP1-208ENST00000588617 RIPOR2Q9Y4F9 1068 aa10.35□□□□□ -0.75
VMP1-208ENST00000588617 ELOA3CA0A087WX78 387 aaPredicted RBP10.34□□□□□ -0.75
VMP1-208ENST00000588617 TRAV20A0A0B4J274 112 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 PLEKHD1A6NEE1 506 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 ELOA3DA6NLF2 546 aaPredicted RBP10.34□□□□□ -0.75
VMP1-208ENST00000588617 NEURL1BA8MQ27 555 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 FSCN2O14926 492 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 TPD52L2O43399 206 aaKnown RBP10.34□□□□□ -0.75
VMP1-208ENST00000588617 HSP90AA2PQ14568 343 aaPredicted RBP10.34□□□□□ -0.75
VMP1-208ENST00000588617 ELOA3BQ3SY89 546 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 CNNM4Q6P4Q7 775 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 RNF180Q86T96 592 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 FCHSD1Q86WN1 690 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 NPAS3Q8IXF0 933 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 FAM13CQ8NE31 585 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 ELOA3Q8NG57 546 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 ATL2Q8NHH9 583 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 MDFIQ99750 246 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 APBA2Q99767 749 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 WNT10AQ9GZT5 417 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 ARHGEF4Q9NR80 690 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 PICK1Q9NRD5 415 aa10.34□□□□□ -0.75
VMP1-208ENST00000588617 TRBV23-1A0A0A0MS06 115 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 GSG1L2A8MUP6 293 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 H3BM21 787 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 TP53P04637 393 aaPredicted RBP10.33□□□□□ -0.76
VMP1-208ENST00000588617 SLFN14P0C7P3 912 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 ALAS2P22557 587 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 PMLP29590 882 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 BAG6P46379 1132 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 ZNF143P52747 638 aaPredicted RBP10.33□□□□□ -0.76
VMP1-208ENST00000588617 GRIK5Q16478 980 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 ZC3H12AQ5D1E8 599 aaKnown RBP10.33□□□□□ -0.76
VMP1-208ENST00000588617 WWC2Q6AWC2 1192 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 PHACTR4Q8IZ21 702 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 SLC16A10Q8TF71 515 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 CLUHP3Q96NS8 147 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 CARD10Q9BWT7 1032 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 USP26Q9BXU7 913 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 JPH1Q9HDC5 661 aaPredicted RBP10.33□□□□□ -0.76
VMP1-208ENST00000588617 MAPRE3Q9UPY8 281 aa10.33□□□□□ -0.76
VMP1-208ENST00000588617 ANKRD34BA5PLL1 514 aa10.32□□□□□ -0.76
VMP1-208ENST00000588617 PPFIA3O75145 1194 aa10.32□□□□□ -0.76
VMP1-208ENST00000588617 PEX14O75381 377 aa10.32□□□□□ -0.76
VMP1-208ENST00000588617 PMS1P54277 932 aaKnown RBP10.32□□□□□ -0.76
VMP1-208ENST00000588617 YARSP54577 528 aaKnown RBP10.32□□□□□ -0.76
VMP1-208ENST00000588617 AKAP4Q5JQC9 854 aa10.32□□□□□ -0.76
VMP1-208ENST00000588617 YOD1Q5VVQ6 348 aaPredicted RBP10.32□□□□□ -0.76
VMP1-208ENST00000588617 SCUBE1Q8IWY4 988 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms