RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 FAM109BQ6ICB4 259 aaPredicted RBP13.68□□□□□ -0.22
CALR-206ENST00000588454 METTL16Q86W50 562 aaKnown RBP13.68□□□□□ -0.22
CALR-206ENST00000588454 TEX11Q8IYF3 940 aa13.68□□□□□ -0.22
CALR-206ENST00000588454 SPATA5Q8NB90 893 aa13.68□□□□□ -0.22
CALR-206ENST00000588454 DHX36Q9H2U1 1008 aaKnown RBP13.68□□□□□ -0.22
CALR-206ENST00000588454 SMC4Q9NTJ3 1288 aa13.68□□□□□ -0.22
CALR-206ENST00000588454 TMOD4Q9NZQ9 345 aa13.68□□□□□ -0.22
CALR-206ENST00000588454 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
CALR-206ENST00000588454 PDE3AQ14432 1141 aa13.67□□□□□ -0.22
CALR-206ENST00000588454 LRRC26Q2I0M4 334 aa13.67□□□□□ -0.22
CALR-206ENST00000588454 MORN1Q5T089 497 aa13.67□□□□□ -0.22
CALR-206ENST00000588454 PI16Q6UXB8 463 aa13.67□□□□□ -0.22
CALR-206ENST00000588454 FOXP4Q8IVH2 680 aaPredicted RBP13.67□□□□□ -0.22
CALR-206ENST00000588454 NEUROD6Q96NK8 337 aa13.67□□□□□ -0.22
CALR-206ENST00000588454 COL25A1Q9BXS0 654 aaPredicted RBP13.67□□□□□ -0.22
CALR-206ENST00000588454 RAI14Q9P0K7 980 aa13.67□□□□□ -0.22
CALR-206ENST00000588454 NOB1Q9ULX3 412 aaKnown RBP13.67□□□□□ -0.22
CALR-206ENST00000588454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.67□□□□□ -0.22
CALR-206ENST00000588454 TTC28Q96AY4 2481 aa13.67□□□□□ -0.22
CALR-206ENST00000588454 USP17L10C9JJH3 530 aa13.66□□□□□ -0.22
CALR-206ENST00000588454 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
CALR-206ENST00000588454 CCND3P30281 292 aaPredicted RBP13.66□□□□□ -0.22
CALR-206ENST00000588454 RGS2P41220 211 aa13.66□□□□□ -0.22
CALR-206ENST00000588454 ERVK-9P63128 1117 aa13.66□□□□□ -0.22
CALR-206ENST00000588454 ERVK-24P63145 666 aa13.66□□□□□ -0.22
CALR-206ENST00000588454 MDM2Q00987 491 aaPredicted RBP13.66□□□□□ -0.22
CALR-206ENST00000588454 MTX1Q13505 466 aa13.66□□□□□ -0.22
CALR-206ENST00000588454 POTEEQ6S8J3 1075 aa13.66□□□□□ -0.22
CALR-206ENST00000588454 SH3RF3Q8TEJ3 882 aaPredicted RBP13.66□□□□□ -0.22
CALR-206ENST00000588454 MEIS3Q99687 375 aa13.66□□□□□ -0.22
CALR-206ENST00000588454 API5Q9BZZ5 524 aaKnown RBP13.66□□□□□ -0.22
CALR-206ENST00000588454 PORCNQ9H237 461 aa13.66□□□□□ -0.22
CALR-206ENST00000588454 GINM1Q9NU53 330 aa13.66□□□□□ -0.22
CALR-206ENST00000588454 CDH23Q9H251 3354 aa13.65□□□□□ -0.22
CALR-206ENST00000588454 SIPA1L1O43166 1804 aa13.65□□□□□ -0.22
CALR-206ENST00000588454 SRGAP3O43295 1099 aa13.65□□□□□ -0.22
CALR-206ENST00000588454 PPP4CP60510 307 aa13.65□□□□□ -0.22
CALR-206ENST00000588454 CCL14Q16627 93 aa13.65□□□□□ -0.22
CALR-206ENST00000588454 GORABQ5T7V8 394 aa13.65□□□□□ -0.22
CALR-206ENST00000588454 GPR142Q7Z601 462 aa13.65□□□□□ -0.22
CALR-206ENST00000588454 PLEKHH3Q7Z736 793 aa13.65□□□□□ -0.22
CALR-206ENST00000588454 TRMT2AQ8IZ69 625 aaKnown RBP13.65□□□□□ -0.22
CALR-206ENST00000588454 GTF3C2Q8WUA4 911 aaPredicted RBP13.65□□□□□ -0.22
CALR-206ENST00000588454 GUCD1Q96NT3 240 aa13.65□□□□□ -0.22
CALR-206ENST00000588454 DNAJC18Q9H819 358 aa13.65□□□□□ -0.22
CALR-206ENST00000588454 BAG3O95817 575 aa13.64□□□□□ -0.23
CALR-206ENST00000588454 MCAMP43121 646 aa13.64□□□□□ -0.23
CALR-206ENST00000588454 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.64□□□□□ -0.23
CALR-206ENST00000588454 CCAR1Q8IX12 1150 aaKnown RBP13.64□□□□□ -0.23
CALR-206ENST00000588454 APBA2Q99767 749 aa13.64□□□□□ -0.23
CALR-206ENST00000588454 NOL10Q9BSC4 688 aaKnown RBP13.64□□□□□ -0.23
CALR-206ENST00000588454 EMILIN3Q9NT22 766 aa13.64□□□□□ -0.23
CALR-206ENST00000588454 LRP2BPQ9P2M1 347 aa13.64□□□□□ -0.23
CALR-206ENST00000588454 GNAI3P08754 354 aa13.63□□□□□ -0.23
CALR-206ENST00000588454 CT47B1P0C2W7 299 aaPredicted RBP13.63□□□□□ -0.23
CALR-206ENST00000588454 UQCRFS1P1P0C7P4 283 aa13.63□□□□□ -0.23
CALR-206ENST00000588454 PLCG2P16885 1265 aa13.63□□□□□ -0.23
CALR-206ENST00000588454 MAP2K5Q13163 448 aa13.63□□□□□ -0.23
CALR-206ENST00000588454 SHROOM1Q2M3G4 852 aaPredicted RBP13.63□□□□□ -0.23
CALR-206ENST00000588454 TGFBRAP1Q8WUH2 860 aa13.63□□□□□ -0.23
CALR-206ENST00000588454 EDC3Q96F86 508 aaKnown RBP13.63□□□□□ -0.23
CALR-206ENST00000588454 CDCA7LQ96GN5 454 aa13.63□□□□□ -0.23
CALR-206ENST00000588454 AATFQ9NY61 560 aaKnown RBP eCLIP13.63□□□□□ -0.23
CALR-206ENST00000588454 ZBTB21Q9ULJ3 1066 aa13.63□□□□□ -0.23
CALR-206ENST00000588454 RABGAP1Q9Y3P9 1069 aa13.63□□□□□ -0.23
CALR-206ENST00000588454 CDK5RAP2Q96SN8 1893 aa13.62□□□□□ -0.23
CALR-206ENST00000588454 GDF11O95390 407 aa13.62□□□□□ -0.23
CALR-206ENST00000588454 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
CALR-206ENST00000588454 USP17L2Q6R6M4 530 aa13.62□□□□□ -0.23
CALR-206ENST00000588454 MAPKAPK5Q8IW41 473 aa13.62□□□□□ -0.23
CALR-206ENST00000588454 CRACR2BQ8N4Y2 399 aaPredicted RBP13.62□□□□□ -0.23
CALR-206ENST00000588454 LBHD1Q9BQE6 289 aaPredicted RBP13.62□□□□□ -0.23
CALR-206ENST00000588454 PAGR1Q9BTK6 254 aa13.62□□□□□ -0.23
CALR-206ENST00000588454 SENP6Q9GZR1 1112 aaPredicted RBP13.62□□□□□ -0.23
CALR-206ENST00000588454 MUC3AQ02505 3323 aa13.62□□□□□ -0.23
CALR-206ENST00000588454 FLT1P17948 1338 aa13.62□□□□□ -0.23
CALR-206ENST00000588454 CNMDO75829 334 aa13.61□□□□□ -0.23
CALR-206ENST00000588454 GLRX3O76003 335 aaKnown RBP13.61□□□□□ -0.23
CALR-206ENST00000588454 MFSD14CQ5VZR4 134 aa13.61□□□□□ -0.23
CALR-206ENST00000588454 FLRT1Q9NZU1 646 aa13.61□□□□□ -0.23
CALR-206ENST00000588454 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
CALR-206ENST00000588454 FRMPD3Q5JV73 1810 aa13.61□□□□□ -0.23
CALR-206ENST00000588454 FOCADQ5VW36 1801 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 SLC15A5A6NIM6 579 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 USP17L15C9J2P7 530 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 USP17L13C9JLJ4 530 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 USP17L11C9JVI0 530 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 USP17L18D6R9N7 530 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 USP17L22D6RA61 530 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 USP17L17D6RBQ6 530 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 USP17L19D6RCP7 530 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 USP17L20D6RJB6 530 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 MSCO60682 206 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 IGSF3O75054 1194 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 HOXC6P09630 235 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 PTPREP23469 700 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 CCNA1P78396 465 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 USP17L24Q0WX57 530 aa13.6□□□□□ -0.23
CALR-206ENST00000588454 G3BP1Q13283 466 aaKnown RBP eCLIP13.6□□□□□ -0.23
CALR-206ENST00000588454 ADGRA1Q86SQ6 560 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms