RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 CCDC84Q86UT8 332 aaPredicted RBP12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 ANKRD13AQ8IZ07 590 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 STAG1Q8WVM7 1258 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 ELP3Q9H9T3 547 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 MKNK2Q9HBH9 465 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 SNCAIPQ9Y6H5 919 aa12.71□□□□□ -0.37
SMARCA4-213ENST00000587988 ATAD5Q96QE3 1844 aa12.71□□□□□ -0.38
SMARCA4-213ENST00000587988 DOCK1Q14185 1865 aa12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 NEDD4P46934 1319 aa12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 GH2P01242 217 aa12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 FAM47AQ5JRC9 791 aa12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 RRP12Q5JTH9 1297 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 NOL9Q5SY16 702 aaKnown RBP12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 MFSD6Q6ZSS7 791 aa12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 RASEFQ8IZ41 740 aa12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 SCYL3Q8IZE3 742 aa12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 TAOK2Q9UL54 1235 aa12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 CSADQ9Y600 493 aa12.7□□□□□ -0.38
SMARCA4-213ENST00000587988 E7EWF7 191 aa12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 ORC4O43929 436 aa12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 HSPA6P17066 643 aa12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 HSPA4P34932 840 aa12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 GJA5P36382 358 aa12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 COL9A3Q14050 684 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 ABCB5Q2M3G0 1257 aa12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 ZNF444Q8N0Y2 327 aaPredicted RBP12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 SLC10A4Q96EP9 437 aa12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 ZBTB21Q9ULJ3 1066 aa12.69□□□□□ -0.38
SMARCA4-213ENST00000587988 PHIPQ8WWQ0 1821 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 UNCXA6NJT0 531 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 B4E1Z4 1266 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 MPHOSPH10O00566 681 aaKnown RBP12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 EPB41L2O43491 1005 aaKnown RBP12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 RANBP6O60518 1105 aaKnown RBP12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 PTPRAP18433 802 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 ZNF157P51786 506 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 TFAP4Q01664 338 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 SEPT2Q15019 361 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 RAB3GAP1Q15042 981 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 RGMBQ6NW40 437 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 RASAL3Q86YV0 1011 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 CLEC10AQ8IUN9 316 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 KCNB2Q92953 911 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 CCDC17Q96LX7 622 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 CABP5Q9NP86 173 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 PICK1Q9NRD5 415 aa12.68□□□□□ -0.38
SMARCA4-213ENST00000587988 GREB1LQ9C091 1923 aaPredicted RBP12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 ASNSP08243 561 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 PCP11498 1178 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 MKRN3Q13064 507 aaKnown RBP12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 DEFB115Q30KQ5 88 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 ADCK5Q3MIX3 580 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 CYP4F22Q6NT55 531 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 OPTNQ96CV9 577 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 WNK4Q96J92 1243 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 HHIPL1Q96JK4 782 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 BACH2Q9BYV9 841 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 ZHX2Q9Y6X8 837 aa12.67□□□□□ -0.38
SMARCA4-213ENST00000587988 IGKV6D-41A0A0C4DH26 115 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 SPDYE5A6NIY4 337 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 TSPY2A6NKD2 308 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 USP17L5A8MUK1 530 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 FAM155AB1AL88 458 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 NMT2O60551 498 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 KDM4AO75164 1064 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 TSPY3P0CV98 308 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 TSPY8P0CW00 308 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 TMEM179Q6ZVK1 233 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 CYB5R4Q7L1T6 521 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 ERO1BQ86YB8 467 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 SIAH1Q8IUQ4 282 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 NEDD1Q8NHV4 660 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 KRT23Q9C075 422 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 IL17RBQ9NRM6 502 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 GINM1Q9NU53 330 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 ZSWIM5Q9P217 1185 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 AFG3L2Q9Y4W6 797 aa12.66□□□□□ -0.38
SMARCA4-213ENST00000587988 IRF6O14896 467 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 SLC10A3P09131 477 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 PPATQ06203 517 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 GRM1Q13255 1194 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 SPRYD7Q5W111 196 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 CHST3Q7LGC8 479 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 MB21D2Q8IYB1 491 aaPredicted RBP12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 NCOA7Q8NI08 942 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 ACER1Q8TDN7 264 aa12.65□□□□□ -0.38
SMARCA4-213ENST00000587988 ESR2Q92731 530 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms