RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 DOCK3Q8IZD9 2030 aa17.3■□□□□ 0.36
ERCC1-205ENST00000587888 IDH1O75874 414 aaKnown RBP17.3■□□□□ 0.36
ERCC1-205ENST00000587888 HLA-DOAP06340 250 aa17.3■□□□□ 0.36
ERCC1-205ENST00000587888 MIGA1Q8NAN2 632 aa17.3■□□□□ 0.36
ERCC1-205ENST00000587888 PAK6Q9NQU5 681 aaPredicted RBP17.3■□□□□ 0.36
ERCC1-205ENST00000587888 GJD2Q9UKL4 321 aa17.3■□□□□ 0.36
ERCC1-205ENST00000587888 MYO5AQ9Y4I1 1855 aaKnown RBP17.29■□□□□ 0.36
ERCC1-205ENST00000587888 C19orf81C9J6K1 198 aa17.29■□□□□ 0.36
ERCC1-205ENST00000587888 USP17L10C9JJH3 530 aa17.29■□□□□ 0.36
ERCC1-205ENST00000587888 EVI5O60447 810 aa17.29■□□□□ 0.36
ERCC1-205ENST00000587888 USP5P45974 858 aa17.29■□□□□ 0.36
ERCC1-205ENST00000587888 TRIM32Q13049 653 aa17.29■□□□□ 0.36
ERCC1-205ENST00000587888 METTL16Q86W50 562 aaKnown RBP17.29■□□□□ 0.36
ERCC1-205ENST00000587888 PAWRQ96IZ0 340 aaKnown RBP17.29■□□□□ 0.36
ERCC1-205ENST00000587888 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.29■□□□□ 0.36
ERCC1-205ENST00000587888 LOC285556D6RIA3 1793 aa17.28■□□□□ 0.36
ERCC1-205ENST00000587888 HOXA7P31268 230 aaPredicted RBP17.28■□□□□ 0.36
ERCC1-205ENST00000587888 MIER1Q8N108 512 aa17.28■□□□□ 0.36
ERCC1-205ENST00000587888 MAGEB6Q8N7X4 407 aa17.28■□□□□ 0.36
ERCC1-205ENST00000587888 ZBTB21Q9ULJ3 1066 aa17.28■□□□□ 0.36
ERCC1-205ENST00000587888 SIPA1L1O43166 1804 aa17.28■□□□□ 0.36
ERCC1-205ENST00000587888 HMGCRP04035 888 aa17.27■□□□□ 0.36
ERCC1-205ENST00000587888 CYP2B6P20813 491 aa17.27■□□□□ 0.36
ERCC1-205ENST00000587888 HERVK_113P62684 666 aa17.27■□□□□ 0.36
ERCC1-205ENST00000587888 GPRC5AQ8NFJ5 357 aa17.27■□□□□ 0.36
ERCC1-205ENST00000587888 DIS3LQ8TF46 1054 aaKnown RBP17.27■□□□□ 0.36
ERCC1-205ENST00000587888 CRISPLD2Q9H0B8 497 aa17.27■□□□□ 0.36
ERCC1-205ENST00000587888 ANTXR1Q9H6X2 564 aa17.27■□□□□ 0.36
ERCC1-205ENST00000587888 TXNRD2Q9NNW7 524 aa17.27■□□□□ 0.36
ERCC1-205ENST00000587888 HMX1Q9NP08 348 aaPredicted RBP17.27■□□□□ 0.36
ERCC1-205ENST00000587888 MORF4L1Q9UBU8 362 aa17.27■□□□□ 0.36
ERCC1-205ENST00000587888 EXOC6BQ9Y2D4 811 aa17.27■□□□□ 0.36
ERCC1-205ENST00000587888 GH2P01242 217 aa17.26■□□□□ 0.35
ERCC1-205ENST00000587888 CAPN2P17655 700 aa17.26■□□□□ 0.35
ERCC1-205ENST00000587888 ZYXQ15942 572 aaKnown RBP17.26■□□□□ 0.35
ERCC1-205ENST00000587888 Q3C1V9 767 aa17.26■□□□□ 0.35
ERCC1-205ENST00000587888 CEP85Q6P2H3 762 aa17.26■□□□□ 0.35
ERCC1-205ENST00000587888 AACSQ86V21 672 aa17.26■□□□□ 0.35
ERCC1-205ENST00000587888 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
ERCC1-205ENST00000587888 BCL11AQ9H165 835 aa17.26■□□□□ 0.35
ERCC1-205ENST00000587888 EMILIN3Q9NT22 766 aa17.26■□□□□ 0.35
ERCC1-205ENST00000587888 GINM1Q9NU53 330 aa17.26■□□□□ 0.35
ERCC1-205ENST00000587888 RBPJLQ9UBG7 517 aa17.26■□□□□ 0.35
ERCC1-205ENST00000587888 CDK5RAP2Q96SN8 1893 aa17.26■□□□□ 0.35
ERCC1-205ENST00000587888 MAST2Q6P0Q8 1798 aa17.25■□□□□ 0.35
ERCC1-205ENST00000587888 RPTORQ8N122 1335 aa17.25■□□□□ 0.35
ERCC1-205ENST00000587888 IGSF3O75054 1194 aa17.25■□□□□ 0.35
ERCC1-205ENST00000587888 USP17L2Q6R6M4 530 aa17.25■□□□□ 0.35
ERCC1-205ENST00000587888 NECAB2Q7Z6G3 386 aa17.25■□□□□ 0.35
ERCC1-205ENST00000587888 PANK1Q8TE04 598 aa17.25■□□□□ 0.35
ERCC1-205ENST00000587888 NUDT12Q9BQG2 462 aa17.25■□□□□ 0.35
ERCC1-205ENST00000587888 PAGR1Q9BTK6 254 aa17.25■□□□□ 0.35
ERCC1-205ENST00000587888 MAP3K12Q12852 859 aa17.24■□□□□ 0.35
ERCC1-205ENST00000587888 RAB3GAP1Q15042 981 aa17.24■□□□□ 0.35
ERCC1-205ENST00000587888 TRIB2Q92519 343 aa17.24■□□□□ 0.35
ERCC1-205ENST00000587888 FEZ1Q99689 392 aa17.24■□□□□ 0.35
ERCC1-205ENST00000587888 FOCADQ5VW36 1801 aa17.24■□□□□ 0.35
ERCC1-205ENST00000587888 APBB1O00213 710 aa17.23■□□□□ 0.35
ERCC1-205ENST00000587888 PDE3AQ14432 1141 aa17.23■□□□□ 0.35
ERCC1-205ENST00000587888 TATDN1Q6P1N9 297 aa17.23■□□□□ 0.35
ERCC1-205ENST00000587888 TTC6Q86TZ1 520 aa17.23■□□□□ 0.35
ERCC1-205ENST00000587888 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
ERCC1-205ENST00000587888 IL1RAPL2Q9NP60 686 aa17.23■□□□□ 0.35
ERCC1-205ENST00000587888 STAP2Q9UGK3 403 aa17.23■□□□□ 0.35
ERCC1-205ENST00000587888 SERPINB13Q9UIV8 391 aa17.23■□□□□ 0.35
ERCC1-205ENST00000587888 MYH1P12882 1939 aa17.22■□□□□ 0.35
ERCC1-205ENST00000587888 MAPK4P31152 587 aa17.22■□□□□ 0.35
ERCC1-205ENST00000587888 ERVK-9P63128 1117 aa17.22■□□□□ 0.35
ERCC1-205ENST00000587888 ERVK-24P63145 666 aa17.22■□□□□ 0.35
ERCC1-205ENST00000587888 CERKLQ49MI3 558 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-205ENST00000587888 POTEEQ6S8J3 1075 aa17.22■□□□□ 0.35
ERCC1-205ENST00000587888 CERS3Q8IU89 383 aa17.22■□□□□ 0.35
ERCC1-205ENST00000587888 PORCNQ9H237 461 aa17.22■□□□□ 0.35
ERCC1-205ENST00000587888 PRO3102Q9H379 93 aa17.22■□□□□ 0.35
ERCC1-205ENST00000587888 CWC22Q9HCG8 908 aaKnown RBP17.22■□□□□ 0.35
ERCC1-205ENST00000587888 PRKAR2AP13861 404 aaKnown RBP17.21■□□□□ 0.35
ERCC1-205ENST00000587888 PLCD1P51178 756 aa17.21■□□□□ 0.35
ERCC1-205ENST00000587888 ABCB5Q2M3G0 1257 aa17.21■□□□□ 0.35
ERCC1-205ENST00000587888 GPR142Q7Z601 462 aa17.21■□□□□ 0.35
ERCC1-205ENST00000587888 C7orf61Q8IZ16 206 aa17.21■□□□□ 0.35
ERCC1-205ENST00000587888 ANKLE1Q8NAG6 615 aa17.21■□□□□ 0.35
ERCC1-205ENST00000587888 RHPN1Q8TCX5 695 aa17.21■□□□□ 0.35
ERCC1-205ENST00000587888 NBPF3Q9H094 633 aa17.21■□□□□ 0.35
ERCC1-205ENST00000587888 CABP5Q9NP86 173 aa17.21■□□□□ 0.35
ERCC1-205ENST00000587888 PLXNB2O15031 1838 aa17.21■□□□□ 0.35
ERCC1-205ENST00000587888 MAGEB6P1A0A0J9YX57 407 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 USP17L15C9J2P7 530 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 USP17L13C9JLJ4 530 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 USP17L11C9JVI0 530 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 USP17L18D6R9N7 530 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 USP17L22D6RA61 530 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 USP17L17D6RBQ6 530 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 USP17L19D6RCP7 530 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 USP17L20D6RJB6 530 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 POLR3DP05423 398 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-205ENST00000587888 XRCC5P13010 732 aaKnown RBP17.2■□□□□ 0.34
ERCC1-205ENST00000587888 ZKSCAN1P17029 563 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-205ENST00000587888 USP17L24Q0WX57 530 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 CCL14Q16627 93 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 WDR78Q5VTH9 848 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms