RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 SMARCE1Q969G3 411 aa22.71■■□□□ 1.23
MBD1-216ENST00000587605 CACNA1SQ13698 1873 aa22.71■■□□□ 1.23
MBD1-216ENST00000587605 SCN7AQ01118 1682 aa22.71■■□□□ 1.23
MBD1-216ENST00000587605 PRPF3O43395 683 aaKnown RBP22.7■■□□□ 1.23
MBD1-216ENST00000587605 SARSP49591 514 aaKnown RBP22.7■■□□□ 1.23
MBD1-216ENST00000587605 CATIPQ7Z7H3 387 aa22.7■■□□□ 1.23
MBD1-216ENST00000587605 RIOK1Q9BRS2 568 aaKnown RBP22.7■■□□□ 1.23
MBD1-216ENST00000587605 TMX1Q9H3N1 280 aa22.7■■□□□ 1.23
MBD1-216ENST00000587605 MAN1B1Q9UKM7 699 aa22.7■■□□□ 1.23
MBD1-216ENST00000587605 UBE2Q2LH0YL09 131 aa22.7■■□□□ 1.22
MBD1-216ENST00000587605 SLU7O95391 586 aaKnown RBP22.7■■□□□ 1.22
MBD1-216ENST00000587605 FGRP09769 529 aa22.7■■□□□ 1.22
MBD1-216ENST00000587605 TOP1P11387 765 aaKnown RBP22.7■■□□□ 1.22
MBD1-216ENST00000587605 FOXP4Q8IVH2 680 aaPredicted RBP22.7■■□□□ 1.22
MBD1-216ENST00000587605 ENOX1Q8TC92 643 aaKnown RBP22.7■■□□□ 1.22
MBD1-216ENST00000587605 ZSCAN10Q96SZ4 725 aaPredicted RBP22.7■■□□□ 1.22
MBD1-216ENST00000587605 TRIM75PA6NK02 468 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 MINDY4BA8MYZ0 360 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 DDAH1O94760 285 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 IQCA1Q86XH1 822 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 L2HGDHQ9H9P8 463 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 BRMS1Q9HCU9 246 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 AATFQ9NY61 560 aaKnown RBP eCLIP22.69■■□□□ 1.22
MBD1-216ENST00000587605 ABCF2Q9UG63 623 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 POLR2DO15514 142 aaKnown RBP22.69■■□□□ 1.22
MBD1-216ENST00000587605 KRT2P35908 639 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 MORC3Q14149 939 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 TAOK2Q9UL54 1235 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 PCDHB6Q9Y5E3 794 aa22.69■■□□□ 1.22
MBD1-216ENST00000587605 NT5C2P49902 561 aa22.68■■□□□ 1.22
MBD1-216ENST00000587605 MARCH10Q8NA82 808 aaPredicted RBP22.68■■□□□ 1.22
MBD1-216ENST00000587605 FERMT2Q96AC1 680 aa22.68■■□□□ 1.22
MBD1-216ENST00000587605 BCL11BQ9C0K0 894 aaPredicted RBP22.68■■□□□ 1.22
MBD1-216ENST00000587605 FANCLQ9NW38 375 aa22.68■■□□□ 1.22
MBD1-216ENST00000587605 ERCC5P28715 1186 aaPredicted RBP22.67■■□□□ 1.22
MBD1-216ENST00000587605 NR5A1Q13285 461 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 IFIT1BQ5T764 474 aaKnown RBP22.67■■□□□ 1.22
MBD1-216ENST00000587605 ADGRA1Q86SQ6 560 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 ENAHQ8N8S7 591 aaPredicted RBP22.67■■□□□ 1.22
MBD1-216ENST00000587605 SPATA20Q8TB22 786 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 SDR42E1Q8WUS8 393 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 ARID3AQ99856 593 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 PHF20Q9BVI0 1012 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 SERTAD1Q9UHV2 236 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 PHLPP2Q6ZVD8 1323 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 COL1A1P02452 1464 aaPredicted RBP22.67■■□□□ 1.22
MBD1-216ENST00000587605 ZBTB22O15209 634 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 ZSCAN12O43309 604 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 ACTN4O43707 911 aaKnown RBP22.67■■□□□ 1.22
MBD1-216ENST00000587605 BARGINQ6ZT62 677 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 ZNF397Q8NF99 534 aaPredicted RBP22.67■■□□□ 1.22
MBD1-216ENST00000587605 ACSBG1Q96GR2 724 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 OGFRQ9NZT2 677 aa22.67■■□□□ 1.22
MBD1-216ENST00000587605 ZNF215Q9UL58 517 aaPredicted RBP22.67■■□□□ 1.22
MBD1-216ENST00000587605 ZNF18P17022 549 aa22.66■■□□□ 1.22
MBD1-216ENST00000587605 BMP6P22004 513 aa22.66■■□□□ 1.22
MBD1-216ENST00000587605 GYG1P46976 350 aa22.66■■□□□ 1.22
MBD1-216ENST00000587605 FUT2Q10981 343 aa22.66■■□□□ 1.22
MBD1-216ENST00000587605 NUTM2AQ8IVF1 878 aaPredicted RBP22.66■■□□□ 1.22
MBD1-216ENST00000587605 DPF2Q92785 391 aa22.66■■□□□ 1.22
MBD1-216ENST00000587605 ZMYND15Q9H091 742 aa22.66■■□□□ 1.22
MBD1-216ENST00000587605 CABP5Q9NP86 173 aa22.66■■□□□ 1.22
MBD1-216ENST00000587605 A0A0G2JS52 829 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 GOLGA6L9A6NEM1 432 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 ARHGAP6O43182 974 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 IGSF3O75054 1194 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 SLC10A5Q5PT55 438 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 CASZ1Q86V15 1759 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 ORC4O43929 436 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 PLCD1P51178 756 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 PDE4BQ07343 736 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 PKN1Q16512 942 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 CCDC82Q8N4S0 544 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 OXER1Q8TDS5 423 aa22.65■■□□□ 1.22
MBD1-216ENST00000587605 SPATA31A5Q5VU36 1347 aa22.64■■□□□ 1.22
MBD1-216ENST00000587605 SPATA31A7Q8IWB4 1347 aa22.64■■□□□ 1.22
MBD1-216ENST00000587605 MAST2Q6P0Q8 1798 aa22.64■■□□□ 1.22
MBD1-216ENST00000587605 KDM4FA0A1W2PPD8 638 aa22.64■■□□□ 1.21
MBD1-216ENST00000587605 ETF1P62495 437 aaKnown RBP22.64■■□□□ 1.21
MBD1-216ENST00000587605 TBX2Q13207 712 aaPredicted RBP22.64■■□□□ 1.21
MBD1-216ENST00000587605 ERFEQ4G0M1 354 aa22.64■■□□□ 1.21
MBD1-216ENST00000587605 SPECC1Q5M775 1068 aa22.64■■□□□ 1.21
MBD1-216ENST00000587605 PYM1Q9BRP8 204 aaKnown RBP22.64■■□□□ 1.21
MBD1-216ENST00000587605 CSRNP2Q9H175 543 aa22.64■■□□□ 1.21
MBD1-216ENST00000587605 MINPP1Q9UNW1 487 aa22.64■■□□□ 1.21
MBD1-216ENST00000587605 LAMB1P07942 1786 aa22.64■■□□□ 1.21
MBD1-216ENST00000587605 MYH2Q9UKX2 1941 aa22.64■■□□□ 1.21
MBD1-216ENST00000587605 FOXN1O15353 648 aa22.63■■□□□ 1.21
MBD1-216ENST00000587605 GRIN1Q05586 938 aa22.63■■□□□ 1.21
MBD1-216ENST00000587605 FBXO33Q7Z6M2 555 aa22.63■■□□□ 1.21
MBD1-216ENST00000587605 NFE2L3Q9Y4A8 694 aa22.63■■□□□ 1.21
MBD1-216ENST00000587605 CDK11BP21127 795 aaKnown RBP22.63■■□□□ 1.21
MBD1-216ENST00000587605 CCDC93Q567U6 631 aa22.63■■□□□ 1.21
MBD1-216ENST00000587605 TMTC3Q6ZXV5 915 aa22.63■■□□□ 1.21
MBD1-216ENST00000587605 CMTR1Q8N1G2 835 aaKnown RBP22.63■■□□□ 1.21
MBD1-216ENST00000587605 FAM84BQ96KN1 310 aaPredicted RBP22.63■■□□□ 1.21
MBD1-216ENST00000587605 SRRTQ9BXP5 876 aaKnown RBP22.63■■□□□ 1.21
MBD1-216ENST00000587605 IQSEC3Q9UPP2 1182 aaPredicted RBP22.63■■□□□ 1.21
MBD1-216ENST00000587605 COL4A1P02462 1669 aa22.62■■□□□ 1.21
MBD1-216ENST00000587605 SLFN14P0C7P3 912 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms