RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SLITRK5O94991 958 aa7.52□□□□□ -1.21
VMP1-205ENST00000587470 TFE3P19532 575 aaPredicted RBP7.52□□□□□ -1.21
VMP1-205ENST00000587470 ITGAEP38570 1179 aa7.52□□□□□ -1.21
VMP1-205ENST00000587470 CD96P40200 585 aa7.52□□□□□ -1.21
VMP1-205ENST00000587470 NKPD1Q17RQ9 610 aa7.52□□□□□ -1.21
VMP1-205ENST00000587470 DIEXFQ68CQ4 756 aaKnown RBP7.52□□□□□ -1.21
VMP1-205ENST00000587470 SPACA3Q8IXA5 215 aa7.52□□□□□ -1.21
VMP1-205ENST00000587470 ASB11Q8WXH4 323 aa7.52□□□□□ -1.21
VMP1-205ENST00000587470 CST3P01034 146 aaPredicted RBP7.51□□□□□ -1.21
VMP1-205ENST00000587470 RPL6Q02878 288 aaKnown RBP7.51□□□□□ -1.21
VMP1-205ENST00000587470 ANGEL2Q5VTE6 544 aaKnown RBP7.51□□□□□ -1.21
VMP1-205ENST00000587470 CCDC84Q86UT8 332 aaPredicted RBP7.51□□□□□ -1.21
VMP1-205ENST00000587470 PHC3Q8NDX5 983 aa7.51□□□□□ -1.21
VMP1-205ENST00000587470 PI4K2BQ8TCG2 481 aa7.51□□□□□ -1.21
VMP1-205ENST00000587470 CRELD1Q96HD1 420 aa7.51□□□□□ -1.21
VMP1-205ENST00000587470 MIPEPQ99797 713 aa7.51□□□□□ -1.21
VMP1-205ENST00000587470 MRS2Q9HD23 443 aa7.51□□□□□ -1.21
VMP1-205ENST00000587470 TPX2Q9ULW0 747 aaKnown RBP7.51□□□□□ -1.21
VMP1-205ENST00000587470 TLR6Q9Y2C9 796 aa7.51□□□□□ -1.21
VMP1-205ENST00000587470 CLCN7P51798 805 aa7.5□□□□□ -1.21
VMP1-205ENST00000587470 PDE4BQ07343 736 aa7.5□□□□□ -1.21
VMP1-205ENST00000587470 SFRP5Q5T4F7 317 aa7.5□□□□□ -1.21
VMP1-205ENST00000587470 ZNF746Q6NUN9 644 aaPredicted RBP7.5□□□□□ -1.21
VMP1-205ENST00000587470 LETMD1Q6P1Q0 360 aa7.5□□□□□ -1.21
VMP1-205ENST00000587470 JARID2Q92833 1246 aaPredicted RBP7.5□□□□□ -1.21
VMP1-205ENST00000587470 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
VMP1-205ENST00000587470 BIN1O00499 593 aa7.49□□□□□ -1.21
VMP1-205ENST00000587470 PGRP06401 933 aa7.49□□□□□ -1.21
VMP1-205ENST00000587470 C8AP07357 584 aa7.49□□□□□ -1.21
VMP1-205ENST00000587470 RNASE1P07998 156 aaKnown RBP7.49□□□□□ -1.21
VMP1-205ENST00000587470 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
VMP1-205ENST00000587470 PRAMEF13Q5VWM6 474 aa7.49□□□□□ -1.21
VMP1-205ENST00000587470 C22orf34Q6ZV56 151 aa7.49□□□□□ -1.21
VMP1-205ENST00000587470 MRPL41Q8IXM3 137 aaKnown RBP7.49□□□□□ -1.21
VMP1-205ENST00000587470 RIN3Q8TB24 985 aa7.49□□□□□ -1.21
VMP1-205ENST00000587470 MBNL3Q9NUK0 354 aaKnown RBP7.49□□□□□ -1.21
VMP1-205ENST00000587470 VTI1BQ9UEU0 232 aa7.49□□□□□ -1.21
VMP1-205ENST00000587470 CARMIL2Q6F5E8 1435 aa7.49□□□□□ -1.21
VMP1-205ENST00000587470 CECR2Q9BXF3 1484 aa7.49□□□□□ -1.21
VMP1-205ENST00000587470 ZNF865P0CJ78 1059 aaPredicted RBP7.48□□□□□ -1.21
VMP1-205ENST00000587470 LMNB2Q03252 620 aa7.48□□□□□ -1.21
VMP1-205ENST00000587470 SLC6A19Q695T7 634 aa7.48□□□□□ -1.21
VMP1-205ENST00000587470 SLC23A3Q6PIS1 610 aa7.48□□□□□ -1.21
VMP1-205ENST00000587470 ATG4DQ86TL0 474 aaPredicted RBP7.48□□□□□ -1.21
VMP1-205ENST00000587470 RC3H2Q9HBD1 1191 aaKnown RBP7.48□□□□□ -1.21
VMP1-205ENST00000587470 TJP2Q9UDY2 1190 aa7.48□□□□□ -1.21
VMP1-205ENST00000587470 CNTNAP4Q9C0A0 1308 aa7.48□□□□□ -1.21
VMP1-205ENST00000587470 FAM155AB1AL88 458 aaPredicted RBP7.47□□□□□ -1.21
VMP1-205ENST00000587470 CYP7A1P22680 504 aa7.47□□□□□ -1.21
VMP1-205ENST00000587470 IKZF1Q13422 519 aa7.47□□□□□ -1.21
VMP1-205ENST00000587470 RELL1Q8IUW5 271 aa7.47□□□□□ -1.21
VMP1-205ENST00000587470 XAGE3Q8WTP9 111 aa7.47□□□□□ -1.21
VMP1-205ENST00000587470 TMEM87BQ96K49 555 aa7.47□□□□□ -1.21
VMP1-205ENST00000587470 COX4I2Q96KJ9 171 aa7.47□□□□□ -1.21
VMP1-205ENST00000587470 RSRP1Q9BUV0 290 aa7.47□□□□□ -1.21
VMP1-205ENST00000587470 ADAM30Q9UKF2 790 aa7.47□□□□□ -1.21
VMP1-205ENST00000587470 ADAMTS6Q9UKP5 1117 aa7.47□□□□□ -1.21
VMP1-205ENST00000587470 PITPNM2Q9BZ72 1349 aa7.47□□□□□ -1.21
VMP1-205ENST00000587470 NACADO15069 1562 aa7.46□□□□□ -1.21
VMP1-205ENST00000587470 PRR33A8MZF0 331 aa7.46□□□□□ -1.22
VMP1-205ENST00000587470 ZP2Q05996 745 aa7.46□□□□□ -1.22
VMP1-205ENST00000587470 CAMK2GQ13555 558 aaPredicted RBP7.46□□□□□ -1.22
VMP1-205ENST00000587470 PWP1Q13610 501 aa7.46□□□□□ -1.22
VMP1-205ENST00000587470 MCATQ8IVS2 390 aaKnown RBP7.46□□□□□ -1.22
VMP1-205ENST00000587470 MFSD4AQ8N468 514 aa7.46□□□□□ -1.22
VMP1-205ENST00000587470 TMEM74Q96NL1 305 aa7.46□□□□□ -1.22
VMP1-205ENST00000587470 CILPO75339 1184 aa7.45□□□□□ -1.22
VMP1-205ENST00000587470 BPNT1O95861 308 aa7.45□□□□□ -1.22
VMP1-205ENST00000587470 PF4P02776 101 aa7.45□□□□□ -1.22
VMP1-205ENST00000587470 LCE4AQ5TA78 99 aa7.45□□□□□ -1.22
VMP1-205ENST00000587470 CDH24Q86UP0 819 aa7.45□□□□□ -1.22
VMP1-205ENST00000587470 LRRN4CLQ8ND94 238 aa7.45□□□□□ -1.22
VMP1-205ENST00000587470 GATAD2BQ8WXI9 593 aa7.45□□□□□ -1.22
VMP1-205ENST00000587470 HSPA12BQ96MM6 686 aa7.45□□□□□ -1.22
VMP1-205ENST00000587470 LMCD1Q9NZU5 365 aa7.45□□□□□ -1.22
VMP1-205ENST00000587470 CAPN6Q9Y6Q1 641 aa7.45□□□□□ -1.22
VMP1-205ENST00000587470 FAM221AA4D161 298 aa7.44□□□□□ -1.22
VMP1-205ENST00000587470 CBX7O95931 251 aa7.44□□□□□ -1.22
VMP1-205ENST00000587470 GBP2P32456 591 aaPredicted RBP7.44□□□□□ -1.22
VMP1-205ENST00000587470 ETV3P41162 512 aa7.44□□□□□ -1.22
VMP1-205ENST00000587470 KIR3DL1P43629 444 aa7.44□□□□□ -1.22
VMP1-205ENST00000587470 CDKAL1Q5VV42 579 aa7.44□□□□□ -1.22
VMP1-205ENST00000587470 BNC2Q6ZN30 1099 aaPredicted RBP7.44□□□□□ -1.22
VMP1-205ENST00000587470 ACSF2Q96CM8 615 aaPredicted RBP7.44□□□□□ -1.22
VMP1-205ENST00000587470 RHOVQ96L33 236 aa7.44□□□□□ -1.22
VMP1-205ENST00000587470 DPH2Q9BQC3 489 aaPredicted RBP7.44□□□□□ -1.22
VMP1-205ENST00000587470 SEMA3GQ9NS98 782 aa7.44□□□□□ -1.22
VMP1-205ENST00000587470 ST14Q9Y5Y6 855 aa7.44□□□□□ -1.22
VMP1-205ENST00000587470 F6X3S4 739 aa7.43□□□□□ -1.22
VMP1-205ENST00000587470 PLCG1P19174 1290 aa7.43□□□□□ -1.22
VMP1-205ENST00000587470 BCL2L13Q9BXK5 485 aa7.43□□□□□ -1.22
VMP1-205ENST00000587470 PRDM7Q9NQW5 492 aa7.43□□□□□ -1.22
VMP1-205ENST00000587470 CORINQ9Y5Q5 1042 aa7.43□□□□□ -1.22
VMP1-205ENST00000587470 F13A1P00488 732 aa7.42□□□□□ -1.22
VMP1-205ENST00000587470 ZNF326Q5BKZ1 582 aaKnown RBP7.42□□□□□ -1.22
VMP1-205ENST00000587470 TMEM201Q5SNT2 666 aa7.42□□□□□ -1.22
VMP1-205ENST00000587470 THAP5Q7Z6K1 395 aa7.42□□□□□ -1.22
VMP1-205ENST00000587470 ATP13A1Q9HD20 1204 aa7.42□□□□□ -1.22
VMP1-205ENST00000587470 CEP131Q9UPN4 1083 aa7.42□□□□□ -1.22
VMP1-205ENST00000587470 MINDY4BA8MYZ0 360 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms