RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 IFT74Q96LB3 600 aa10.93□□□□□ -0.66
GPATCH8-205ENST00000587228 XRCC6P12956 609 aaKnown RBP eCLIP10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 PLCB3Q01970 1234 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 KIF5AQ12840 1032 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 TAF12Q16514 161 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 SUSD4Q5VX71 490 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 FANCBQ8NB91 859 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 FERMT1Q9BQL6 677 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 CTNND2Q9UQB3 1225 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 TESPA1A2RU30 521 aaPredicted RBP10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 DYNLL1P63167 89 aaKnown RBP10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 TBC1D8BQ0IIM8 1120 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 GADL1Q6ZQY3 521 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 GPR101Q96P66 508 aaPredicted RBP10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 TM6SF1Q9BZW5 370 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 SORBS3O60504 671 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 HLFQ16534 295 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 LEO1Q8WVC0 666 aaPredicted RBP10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 GLG1Q92896 1179 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 CSRNP1Q96S65 589 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 GUCA1BQ9UMX6 200 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 DNM3Q9UQ16 869 aa10.92□□□□□ -0.66
GPATCH8-205ENST00000587228 KIF1BO60333 1816 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 CUTAO60888 179 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 FLOT1O75955 427 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 KARSQ15046 597 aaKnown RBP10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 UBE3CQ15386 1083 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 NOC4LQ9BVI4 516 aaKnown RBP10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 LZTFL1Q9NQ48 299 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 A2ML1A8K2U0 1454 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 TACC1O75410 805 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 MCM3P25205 808 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 GPIHBP1Q8IV16 184 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 TPH2Q8IWU9 490 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 CSGALNACT2Q8N6G5 542 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 GPKOWQ92917 476 aaPredicted RBP eCLIP10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 AS3MTQ9HBK9 375 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 CEP83Q9Y592 693 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 GOLGA6L10A0A0M3HER8 536 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 ERVV-1B6SEH8 477 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 TMEM232C9JQI7 657 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 ZNF202O95125 648 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 EPB41P11171 864 aaKnown RBP10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 DIXDC1Q155Q3 683 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 SLFN13Q68D06 897 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 NLRX1Q86UT6 975 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 NELFCDQ8IXH7 590 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 GTF3C6Q969F1 213 aa10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 GTPBP4Q9BZE4 634 aaKnown RBP10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 TRIM6Q9C030 488 aaPredicted RBP10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 THRAP3Q9Y2W1 955 aaKnown RBP10.91□□□□□ -0.66
GPATCH8-205ENST00000587228 SNAP23O00161 211 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 CCDC175P0C221 793 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 ZNF853P0CG23 659 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 ABCB5Q2M3G0 1257 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 CIAO1O76071 339 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 CNNM4Q6P4Q7 775 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 MAATS1Q7Z4T9 603 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 MYCT1Q8N699 235 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 PSTPIP2Q9H939 334 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 CCDC66A2RUB6 948 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 CETN3O15182 167 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 POLR3GO15318 223 aaPredicted RBP10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 DKC1O60832 514 aaKnown RBP eCLIP10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 GAS7O60861 476 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 KRT5P13647 590 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 PTPN12Q05209 780 aaKnown RBP10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 STRN3Q13033 797 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 ANKRD35Q8N283 1001 aa10.9□□□□□ -0.66
GPATCH8-205ENST00000587228 GOLGA6L7A0A1B0GV03 622 aa10.9□□□□□ -0.67
GPATCH8-205ENST00000587228 KCNQ2O43526 872 aa10.9□□□□□ -0.67
GPATCH8-205ENST00000587228 PRKAB2O43741 272 aa10.9□□□□□ -0.67
GPATCH8-205ENST00000587228 KRT86O43790 486 aa10.9□□□□□ -0.67
GPATCH8-205ENST00000587228 INF2Q27J81 1249 aa10.9□□□□□ -0.67
GPATCH8-205ENST00000587228 ATG3Q9NT62 314 aa10.9□□□□□ -0.67
GPATCH8-205ENST00000587228 FSD2A1L4K1 749 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 ERICH4A6NGS2 130 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 SEMA3EO15041 775 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 RPS6KA4O75676 772 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 TERF1P54274 439 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 KRT83P78385 493 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 SMC1AQ14683 1233 aaKnown RBP10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 PRR16Q569H4 304 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 CABP7Q86V35 215 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 CCDC50Q8IVM0 306 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 SYNE4Q8N205 404 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 PLCD3Q8N3E9 789 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 TTLL11Q8NHH1 800 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 ATP8A2Q9NTI2 1148 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 TPCN1Q9ULQ1 816 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 MAP2K1Q02750 393 aaPredicted RBP10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 FAM47CQ5HY64 1035 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 WDR44Q5JSH3 913 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 MYSM1Q5VVJ2 828 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 BLZF1Q9H2G9 400 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 C21orf2O43822 256 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 GDF11O95390 407 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 ZNF274Q96GC6 653 aaPredicted RBP10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 BTBD18B2RXH4 712 aa10.89□□□□□ -0.67
GPATCH8-205ENST00000587228 GADD45BO75293 160 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms