RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 C11orf49Q9H6J7 331 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 DNAJC18Q9H819 358 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 PI4KBQ9UBF8 816 aa17.43■□□□□ 0.38
CXXC1-208ENST00000587170 PRKAR2AP13861 404 aaKnown RBP17.42■□□□□ 0.38
CXXC1-208ENST00000587170 MAGEA10P43363 369 aaPredicted RBP17.42■□□□□ 0.38
CXXC1-208ENST00000587170 SH3RF3Q8TEJ3 882 aaPredicted RBP17.42■□□□□ 0.38
CXXC1-208ENST00000587170 TXNRD2Q9NNW7 524 aa17.42■□□□□ 0.38
CXXC1-208ENST00000587170 GINM1Q9NU53 330 aa17.42■□□□□ 0.38
CXXC1-208ENST00000587170 ZMYND8Q9ULU4 1186 aaPredicted RBP17.42■□□□□ 0.38
CXXC1-208ENST00000587170 ZNFX1Q9P2E3 1918 aaKnown RBP17.41■□□□□ 0.38
CXXC1-208ENST00000587170 HERVK_113P62684 666 aa17.41■□□□□ 0.38
CXXC1-208ENST00000587170 IRX3P78415 501 aaPredicted RBP17.41■□□□□ 0.38
CXXC1-208ENST00000587170 JAG1P78504 1218 aa17.41■□□□□ 0.38
CXXC1-208ENST00000587170 TRMT44Q8IYL2 757 aaKnown RBP17.41■□□□□ 0.38
CXXC1-208ENST00000587170 TDHQ8IZJ6 230 aa17.41■□□□□ 0.38
CXXC1-208ENST00000587170 RAI14Q9P0K7 980 aa17.41■□□□□ 0.38
CXXC1-208ENST00000587170 FLT1P17948 1338 aa17.41■□□□□ 0.38
CXXC1-208ENST00000587170 SPTBN5Q9NRC6 3674 aaKnown RBP17.41■□□□□ 0.38
CXXC1-208ENST00000587170 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
CXXC1-208ENST00000587170 IGSF3O75054 1194 aa17.4■□□□□ 0.38
CXXC1-208ENST00000587170 UQCRFS1P1P0C7P4 283 aa17.4■□□□□ 0.38
CXXC1-208ENST00000587170 PLCG2P16885 1265 aa17.4■□□□□ 0.38
CXXC1-208ENST00000587170 MAPK4P31152 587 aa17.4■□□□□ 0.38
CXXC1-208ENST00000587170 RARSP54136 660 aaKnown RBP17.4■□□□□ 0.38
CXXC1-208ENST00000587170 PPP4CP60510 307 aa17.4■□□□□ 0.38
CXXC1-208ENST00000587170 GPRC5AQ8NFJ5 357 aa17.4■□□□□ 0.38
CXXC1-208ENST00000587170 NEUROD6Q96NK8 337 aa17.4■□□□□ 0.38
CXXC1-208ENST00000587170 P2RX7Q99572 595 aaKnown RBP17.4■□□□□ 0.38
CXXC1-208ENST00000587170 NUDT12Q9BQG2 462 aa17.4■□□□□ 0.38
CXXC1-208ENST00000587170 STXBP5LQ9Y2K9 1186 aa17.4■□□□□ 0.38
CXXC1-208ENST00000587170 MORN1Q5T089 497 aa17.39■□□□□ 0.37
CXXC1-208ENST00000587170 POTEEQ6S8J3 1075 aa17.39■□□□□ 0.37
CXXC1-208ENST00000587170 DEFB123Q8N688 67 aa17.39■□□□□ 0.37
CXXC1-208ENST00000587170 GTF3C2Q8WUA4 911 aaPredicted RBP17.39■□□□□ 0.37
CXXC1-208ENST00000587170 TMOD4Q9NZQ9 345 aa17.39■□□□□ 0.37
CXXC1-208ENST00000587170 RBPJLQ9UBG7 517 aa17.39■□□□□ 0.37
CXXC1-208ENST00000587170 ZBTB21Q9ULJ3 1066 aa17.39■□□□□ 0.37
CXXC1-208ENST00000587170 PLXNA1Q9UIW2 1896 aa17.39■□□□□ 0.37
CXXC1-208ENST00000587170 COL11A1P12107 1806 aaPredicted RBP17.38■□□□□ 0.37
CXXC1-208ENST00000587170 ZKSCAN1P17029 563 aaPredicted RBP17.38■□□□□ 0.37
CXXC1-208ENST00000587170 SYN1P17600 705 aa17.38■□□□□ 0.37
CXXC1-208ENST00000587170 CYP2B6P20813 491 aa17.38■□□□□ 0.37
CXXC1-208ENST00000587170 ERVK-9P63128 1117 aa17.38■□□□□ 0.37
CXXC1-208ENST00000587170 ERVK-24P63145 666 aa17.38■□□□□ 0.37
CXXC1-208ENST00000587170 GORABQ5T7V8 394 aa17.38■□□□□ 0.37
CXXC1-208ENST00000587170 LHX8Q68G74 356 aa17.38■□□□□ 0.37
CXXC1-208ENST00000587170 ADGRA1Q86SQ6 560 aa17.38■□□□□ 0.37
CXXC1-208ENST00000587170 APBA2Q99767 749 aa17.38■□□□□ 0.37
CXXC1-208ENST00000587170 GPR108Q9NPR9 543 aa17.38■□□□□ 0.37
CXXC1-208ENST00000587170 LRP2BPQ9P2M1 347 aa17.38■□□□□ 0.37
CXXC1-208ENST00000587170 PNMA6EA0A0J9YXQ4 647 aa17.37■□□□□ 0.37
CXXC1-208ENST00000587170 USP17L10C9JJH3 530 aa17.37■□□□□ 0.37
CXXC1-208ENST00000587170 PEX10O60683 326 aa17.37■□□□□ 0.37
CXXC1-208ENST00000587170 BAG3O95817 575 aa17.37■□□□□ 0.37
CXXC1-208ENST00000587170 CACNB2Q08289 660 aaPredicted RBP17.37■□□□□ 0.37
CXXC1-208ENST00000587170 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
CXXC1-208ENST00000587170 SHROOM1Q2M3G4 852 aaPredicted RBP17.37■□□□□ 0.37
CXXC1-208ENST00000587170 FOXP4Q8IVH2 680 aaPredicted RBP17.37■□□□□ 0.37
CXXC1-208ENST00000587170 NOL10Q9BSC4 688 aaKnown RBP17.37■□□□□ 0.37
CXXC1-208ENST00000587170 PORCNQ9H237 461 aa17.37■□□□□ 0.37
CXXC1-208ENST00000587170 MTMR10Q9NXD2 777 aa17.37■□□□□ 0.37
CXXC1-208ENST00000587170 AATFQ9NY61 560 aaKnown RBP eCLIP17.37■□□□□ 0.37
CXXC1-208ENST00000587170 MYH7P12883 1935 aa17.37■□□□□ 0.37
CXXC1-208ENST00000587170 RGS2P41220 211 aa17.36■□□□□ 0.37
CXXC1-208ENST00000587170 NAA16Q6N069 864 aaPredicted RBP17.36■□□□□ 0.37
CXXC1-208ENST00000587170 Q7L0L9 218 aa17.36■□□□□ 0.37
CXXC1-208ENST00000587170 GPR142Q7Z601 462 aa17.36■□□□□ 0.37
CXXC1-208ENST00000587170 TGFBRAP1Q8WUH2 860 aa17.36■□□□□ 0.37
CXXC1-208ENST00000587170 ZNF512BQ96KM6 892 aaPredicted RBP17.36■□□□□ 0.37
CXXC1-208ENST00000587170 C12orf42Q96LP6 360 aa17.36■□□□□ 0.37
CXXC1-208ENST00000587170 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
CXXC1-208ENST00000587170 GNAI2P04899 355 aa17.35■□□□□ 0.37
CXXC1-208ENST00000587170 MAPKAPK5Q8IW41 473 aa17.35■□□□□ 0.37
CXXC1-208ENST00000587170 UBE2OQ9C0C9 1292 aaKnown RBP17.35■□□□□ 0.37
CXXC1-208ENST00000587170 GDF11O95390 407 aa17.34■□□□□ 0.37
CXXC1-208ENST00000587170 CYP2E1P05181 493 aaPredicted RBP17.34■□□□□ 0.37
CXXC1-208ENST00000587170 TRIM27P14373 513 aa17.34■□□□□ 0.37
CXXC1-208ENST00000587170 CCND3P30281 292 aaPredicted RBP17.34■□□□□ 0.37
CXXC1-208ENST00000587170 CCL14Q16627 93 aa17.34■□□□□ 0.37
CXXC1-208ENST00000587170 LRRC26Q2I0M4 334 aa17.34■□□□□ 0.37
CXXC1-208ENST00000587170 Q3C1V9 767 aa17.34■□□□□ 0.37
CXXC1-208ENST00000587170 PLEKHH3Q7Z736 793 aa17.34■□□□□ 0.37
CXXC1-208ENST00000587170 PALD1Q9ULE6 856 aa17.34■□□□□ 0.37
CXXC1-208ENST00000587170 SMCHD1A6NHR9 2005 aa17.33■□□□□ 0.37
CXXC1-208ENST00000587170 BAZ2AQ9UIF9 1905 aaKnown RBP17.33■□□□□ 0.37
CXXC1-208ENST00000587170 CNMDO75829 334 aa17.33■□□□□ 0.36
CXXC1-208ENST00000587170 IGHA2P01877 340 aa17.33■□□□□ 0.36
CXXC1-208ENST00000587170 G3BP1Q13283 466 aaKnown RBP eCLIP17.33■□□□□ 0.36
CXXC1-208ENST00000587170 POLA2Q14181 598 aa17.33■□□□□ 0.36
CXXC1-208ENST00000587170 TNNI3KQ59H18 835 aa17.33■□□□□ 0.36
CXXC1-208ENST00000587170 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.36
CXXC1-208ENST00000587170 LBX2Q6XYB7 198 aa17.33■□□□□ 0.36
CXXC1-208ENST00000587170 CRACR2BQ8N4Y2 399 aaPredicted RBP17.33■□□□□ 0.36
CXXC1-208ENST00000587170 RABGAP1Q9Y3P9 1069 aa17.33■□□□□ 0.36
CXXC1-208ENST00000587170 FPGT-TNNI3KV9GXZ4 949 aa17.33■□□□□ 0.36
CXXC1-208ENST00000587170 MUC3AQ02505 3323 aa17.33■□□□□ 0.36
CXXC1-208ENST00000587170 HOXC6P09630 235 aa17.32■□□□□ 0.36
CXXC1-208ENST00000587170 MAP2K5Q13163 448 aa17.32■□□□□ 0.36
CXXC1-208ENST00000587170 FAM109BQ6ICB4 259 aaPredicted RBP17.32■□□□□ 0.36
CXXC1-208ENST00000587170 TATDN1Q6P1N9 297 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms