RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 ZSWIM5Q9P217 1185 aa17.35■□□□□ 0.37
CALR-204ENST00000586967 TAF6LQ9Y6J9 622 aa17.35■□□□□ 0.37
CALR-204ENST00000586967 SIPA1L1O43166 1804 aa17.35■□□□□ 0.37
CALR-204ENST00000586967 POLR2AP24928 1970 aaKnown RBP17.35■□□□□ 0.37
CALR-204ENST00000586967 SHMT1P34896 483 aa17.34■□□□□ 0.37
CALR-204ENST00000586967 EXOSC10Q01780 885 aaKnown RBP17.34■□□□□ 0.37
CALR-204ENST00000586967 NEDD1Q8NHV4 660 aa17.34■□□□□ 0.37
CALR-204ENST00000586967 CHMP4CQ96CF2 233 aa17.34■□□□□ 0.37
CALR-204ENST00000586967 PLIN4Q96Q06 1357 aa17.34■□□□□ 0.37
CALR-204ENST00000586967 TCP11L1Q9NUJ3 509 aa17.34■□□□□ 0.37
CALR-204ENST00000586967 UTRNP46939 3433 aa17.34■□□□□ 0.37
CALR-204ENST00000586967 IFIT3O14879 490 aaKnown RBP17.33■□□□□ 0.36
CALR-204ENST00000586967 BECN1Q14457 450 aa17.33■□□□□ 0.36
CALR-204ENST00000586967 ABCB5Q2M3G0 1257 aa17.33■□□□□ 0.36
CALR-204ENST00000586967 NBPF12Q5TAG4 269 aaPredicted RBP17.33■□□□□ 0.36
CALR-204ENST00000586967 CHADLQ6NUI6 762 aa17.33■□□□□ 0.36
CALR-204ENST00000586967 TMEM179Q6ZVK1 233 aa17.33■□□□□ 0.36
CALR-204ENST00000586967 USP48Q86UV5 1035 aa17.33■□□□□ 0.36
CALR-204ENST00000586967 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.36
CALR-204ENST00000586967 TTC14Q96N46 770 aa17.33■□□□□ 0.36
CALR-204ENST00000586967 ADM5C9JUS6 153 aa17.32■□□□□ 0.36
CALR-204ENST00000586967 MPHOSPH10O00566 681 aaKnown RBP17.32■□□□□ 0.36
CALR-204ENST00000586967 LIFRP42702 1097 aa17.32■□□□□ 0.36
CALR-204ENST00000586967 WTAPQ15007 396 aa17.32■□□□□ 0.36
CALR-204ENST00000586967 TMEM67Q5HYA8 995 aa17.32■□□□□ 0.36
CALR-204ENST00000586967 DGKHQ86XP1 1220 aa17.32■□□□□ 0.36
CALR-204ENST00000586967 HSCBQ8IWL3 235 aa17.32■□□□□ 0.36
CALR-204ENST00000586967 SNX21Q969T3 373 aa17.32■□□□□ 0.36
CALR-204ENST00000586967 CDCA5Q96FF9 252 aa17.32■□□□□ 0.36
CALR-204ENST00000586967 ZSCAN10Q96SZ4 725 aaPredicted RBP17.32■□□□□ 0.36
CALR-204ENST00000586967 ANGEL1Q9UNK9 670 aaKnown RBP17.32■□□□□ 0.36
CALR-204ENST00000586967 CTNND1O60716 968 aaKnown RBP17.31■□□□□ 0.36
CALR-204ENST00000586967 ASNSP08243 561 aa17.31■□□□□ 0.36
CALR-204ENST00000586967 IREB2P48200 963 aaKnown RBP17.31■□□□□ 0.36
CALR-204ENST00000586967 EVX2Q03828 476 aa17.31■□□□□ 0.36
CALR-204ENST00000586967 FAM47AQ5JRC9 791 aa17.31■□□□□ 0.36
CALR-204ENST00000586967 SYNE3Q6ZMZ3 975 aa17.31■□□□□ 0.36
CALR-204ENST00000586967 Q6ZUG5 572 aa17.31■□□□□ 0.36
CALR-204ENST00000586967 MIGA2Q7L4E1 593 aa17.31■□□□□ 0.36
CALR-204ENST00000586967 ZSCAN31Q96LW9 406 aaPredicted RBP17.31■□□□□ 0.36
CALR-204ENST00000586967 DNAJC18Q9H819 358 aa17.31■□□□□ 0.36
CALR-204ENST00000586967 KANSL2Q9H9L4 492 aa17.31■□□□□ 0.36
CALR-204ENST00000586967 INCENPQ9NQS7 918 aa17.31■□□□□ 0.36
CALR-204ENST00000586967 SCAF8Q9UPN6 1271 aaKnown RBP17.31■□□□□ 0.36
CALR-204ENST00000586967 RBM19Q9Y4C8 960 aaKnown RBP17.31■□□□□ 0.36
CALR-204ENST00000586967 TNKSO95271 1327 aa17.3■□□□□ 0.36
CALR-204ENST00000586967 CCDC69A6NI79 296 aa17.3■□□□□ 0.36
CALR-204ENST00000586967 UNCXA6NJT0 531 aa17.3■□□□□ 0.36
CALR-204ENST00000586967 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
CALR-204ENST00000586967 IFIT1BQ5T764 474 aaKnown RBP17.3■□□□□ 0.36
CALR-204ENST00000586967 MAP1SQ66K74 1059 aaPredicted RBP17.3■□□□□ 0.36
CALR-204ENST00000586967 NFXL1Q6ZNB6 911 aa17.3■□□□□ 0.36
CALR-204ENST00000586967 CYB5R4Q7L1T6 521 aa17.3■□□□□ 0.36
CALR-204ENST00000586967 ARMC9Q7Z3E5 817 aa17.3■□□□□ 0.36
CALR-204ENST00000586967 AGXT2Q9BYV1 514 aa17.3■□□□□ 0.36
CALR-204ENST00000586967 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
CALR-204ENST00000586967 GLIS2Q9BZE0 524 aaPredicted RBP17.3■□□□□ 0.36
CALR-204ENST00000586967 TACC3Q9Y6A5 838 aa17.3■□□□□ 0.36
CALR-204ENST00000586967 FAM196BA6NMK8 535 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 SH2B2O14492 632 aaPredicted RBP17.29■□□□□ 0.36
CALR-204ENST00000586967 CPA1P15085 419 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 AKR1B1P15121 316 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 YY1P25490 414 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 CAP2P40123 477 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 AK2P54819 239 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 ANTXR2P58335 489 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 FKBP1BP68106 108 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 SH2D4AQ9H788 454 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 ZNF112Q9UJU3 913 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 SYNPO2Q9UMS6 1093 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
CALR-204ENST00000586967 TTLL1O95922 423 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 CALM1P0DP23 149 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 CALM2P0DP24 149 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 CALM3P0DP25 149 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 RCAN1P53805 252 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 TTLL12Q14166 644 aaPredicted RBP17.28■□□□□ 0.36
CALR-204ENST00000586967 CHST3Q7LGC8 479 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 SGMS1Q86VZ5 419 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 CDAN1Q8IWY9 1227 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 IGDCC4Q8TDY8 1250 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 ANKS1AQ92625 1134 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 BRF1Q92994 677 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 KLRG1Q96E93 195 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 WRNIP1Q96S55 665 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 KAT14Q9H8E8 782 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 ARHGEF10LQ9HCE6 1279 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 PICK1Q9NRD5 415 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
CALR-204ENST00000586967 DAXXQ9UER7 740 aaPredicted RBP17.28■□□□□ 0.36
CALR-204ENST00000586967 STX8Q9UNK0 236 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 CSADQ9Y600 493 aa17.28■□□□□ 0.36
CALR-204ENST00000586967 PHF20L1A8MW92 1017 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 GDF11O95390 407 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 GH2P01242 217 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 POTEIP0CG38 1075 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 POTEJP0CG39 1038 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 PPP2R5BQ15173 497 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 MAP3K11Q16584 847 aa17.27■□□□□ 0.36
CALR-204ENST00000586967 PRAMEF18Q5VWM3 479 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms