RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 WNK4Q96J92 1243 aa22.78■■□□□ 1.24
DDX39A-204ENST00000586558 TBC1D2Q9BYX2 928 aa22.78■■□□□ 1.24
DDX39A-204ENST00000586558 WDR33Q9C0J8 1336 aaKnown RBP22.78■■□□□ 1.24
DDX39A-204ENST00000586558 DOCK1Q14185 1865 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 PCP11498 1178 aaKnown RBP22.77■■□□□ 1.24
DDX39A-204ENST00000586558 PTPRAP18433 802 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 PTH1RQ03431 593 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 PPIL2Q13356 520 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 IMMTQ16891 758 aaKnown RBP22.77■■□□□ 1.24
DDX39A-204ENST00000586558 ABCB5Q2M3G0 1257 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 DNAJC5GQ8N7S2 189 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 MAP4K1Q92918 833 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 MKNK2Q9HBH9 465 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 CABP5Q9NP86 173 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 ANO2Q9NQ90 1003 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 ZBTB21Q9ULJ3 1066 aa22.77■■□□□ 1.24
DDX39A-204ENST00000586558 ZNF213O14771 459 aa22.76■■□□□ 1.23
DDX39A-204ENST00000586558 GDF11O95390 407 aa22.76■■□□□ 1.23
DDX39A-204ENST00000586558 OTUD5Q96G74 571 aa22.76■■□□□ 1.23
DDX39A-204ENST00000586558 LSG1Q9H089 658 aaKnown RBP22.76■■□□□ 1.23
DDX39A-204ENST00000586558 GH2P01242 217 aa22.75■■□□□ 1.23
DDX39A-204ENST00000586558 MAP2K2P36507 400 aa22.75■■□□□ 1.23
DDX39A-204ENST00000586558 GRM1Q13255 1194 aa22.75■■□□□ 1.23
DDX39A-204ENST00000586558 RNF41Q9H4P4 317 aaPredicted RBP22.75■■□□□ 1.23
DDX39A-204ENST00000586558 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.75■■□□□ 1.23
DDX39A-204ENST00000586558 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.75■■□□□ 1.23
DDX39A-204ENST00000586558 USP17L5A8MUK1 530 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 ORC4O43929 436 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 REC8O95072 547 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 FGRP09769 529 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 RASA1P20936 1047 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 NT5C2P49902 561 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 HAND2P61296 217 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 CTDSPL2Q05D32 466 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 TMEM179Q6ZVK1 233 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 CNKSR2Q8WXI2 1034 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 ZHX2Q9Y6X8 837 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 THSD7BQ9C0I4 1608 aa22.74■■□□□ 1.23
DDX39A-204ENST00000586558 GJA5P36382 358 aa22.73■■□□□ 1.23
DDX39A-204ENST00000586558 JAG1P78504 1218 aa22.73■■□□□ 1.23
DDX39A-204ENST00000586558 AKNAD1Q5T1N1 836 aa22.73■■□□□ 1.23
DDX39A-204ENST00000586558 REM2Q8IYK8 340 aaPredicted RBP22.73■■□□□ 1.23
DDX39A-204ENST00000586558 ZNF444Q8N0Y2 327 aaPredicted RBP22.73■■□□□ 1.23
DDX39A-204ENST00000586558 STK11IPQ8N1F8 1099 aa22.73■■□□□ 1.23
DDX39A-204ENST00000586558 STAG1Q8WVM7 1258 aa22.73■■□□□ 1.23
DDX39A-204ENST00000586558 AS3MTQ9HBK9 375 aa22.73■■□□□ 1.23
DDX39A-204ENST00000586558 KCNH4Q9UQ05 1017 aa22.73■■□□□ 1.23
DDX39A-204ENST00000586558 RBM8AQ9Y5S9 174 aaKnown RBP22.73■■□□□ 1.23
DDX39A-204ENST00000586558 LAMA4Q16363 1823 aa22.73■■□□□ 1.23
DDX39A-204ENST00000586558 MANSC4A6NHS7 340 aaPredicted RBP22.72■■□□□ 1.23
DDX39A-204ENST00000586558 MPHOSPH10O00566 681 aaKnown RBP22.72■■□□□ 1.23
DDX39A-204ENST00000586558 CXCL11O14625 94 aa22.72■■□□□ 1.23
DDX39A-204ENST00000586558 EIF5BO60841 1220 aaKnown RBP22.72■■□□□ 1.23
DDX39A-204ENST00000586558 WDR18Q9BV38 432 aa22.72■■□□□ 1.23
DDX39A-204ENST00000586558 NBPF3Q9H094 633 aa22.72■■□□□ 1.23
DDX39A-204ENST00000586558 IRF6O14896 467 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 EPB41L2O43491 1005 aaKnown RBP22.71■■□□□ 1.23
DDX39A-204ENST00000586558 PRDM1O75626 825 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 AKR1B1P15121 316 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 GTF2A2P52657 109 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 INHBEP58166 350 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 SNAPC2Q13487 334 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 SHROOM1Q2M3G4 852 aaPredicted RBP22.71■■□□□ 1.23
DDX39A-204ENST00000586558 MFSD6Q6ZSS7 791 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 TBC1D10CQ8IV04 446 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 ZNF280CQ8ND82 737 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 AFG3L2Q9Y4W6 797 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 PLIN4Q96Q06 1357 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 ATAD5Q96QE3 1844 aa22.71■■□□□ 1.23
DDX39A-204ENST00000586558 AOC2O75106 756 aa22.7■■□□□ 1.22
DDX39A-204ENST00000586558 KIF23Q02241 960 aaPredicted RBP22.7■■□□□ 1.22
DDX39A-204ENST00000586558 SREBF2Q12772 1141 aa22.7■■□□□ 1.22
DDX39A-204ENST00000586558 MKRN3Q13064 507 aaKnown RBP22.7■■□□□ 1.22
DDX39A-204ENST00000586558 RAB3GAP1Q15042 981 aa22.7■■□□□ 1.22
DDX39A-204ENST00000586558 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.7■■□□□ 1.22
DDX39A-204ENST00000586558 MYH8P13535 1937 aa22.69■■□□□ 1.22
DDX39A-204ENST00000586558 CYP21A2P08686 494 aa22.69■■□□□ 1.22
DDX39A-204ENST00000586558 CETPP11597 493 aa22.69■■□□□ 1.22
DDX39A-204ENST00000586558 GUCY1A2P33402 732 aa22.69■■□□□ 1.22
DDX39A-204ENST00000586558 SEPT2Q15019 361 aa22.69■■□□□ 1.22
DDX39A-204ENST00000586558 CNNM2Q9H8M5 875 aa22.69■■□□□ 1.22
DDX39A-204ENST00000586558 KANSL2Q9H9L4 492 aa22.69■■□□□ 1.22
DDX39A-204ENST00000586558 TOMM22Q9NS69 142 aa22.69■■□□□ 1.22
DDX39A-204ENST00000586558 TSPY3P0CV98 308 aa22.68■■□□□ 1.22
DDX39A-204ENST00000586558 TSPY8P0CW00 308 aa22.68■■□□□ 1.22
DDX39A-204ENST00000586558 PPP4R3BQ5MIZ7 849 aa22.68■■□□□ 1.22
DDX39A-204ENST00000586558 RNF20Q5VTR2 975 aa22.68■■□□□ 1.22
DDX39A-204ENST00000586558 CCDC84Q86UT8 332 aaPredicted RBP22.68■■□□□ 1.22
DDX39A-204ENST00000586558 NEDD1Q8NHV4 660 aa22.68■■□□□ 1.22
DDX39A-204ENST00000586558 MS4A4AQ96JQ5 239 aa22.68■■□□□ 1.22
DDX39A-204ENST00000586558 TACC3Q9Y6A5 838 aa22.68■■□□□ 1.22
DDX39A-204ENST00000586558 TESPA1A2RU30 521 aaPredicted RBP22.67■■□□□ 1.22
DDX39A-204ENST00000586558 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
DDX39A-204ENST00000586558 TSPY2A6NKD2 308 aa22.67■■□□□ 1.22
DDX39A-204ENST00000586558 RANBP6O60518 1105 aaKnown RBP22.67■■□□□ 1.22
DDX39A-204ENST00000586558 ICA1Q05084 483 aa22.67■■□□□ 1.22
DDX39A-204ENST00000586558 SPP2Q13103 211 aa22.67■■□□□ 1.22
DDX39A-204ENST00000586558 NECTIN1Q15223 517 aa22.67■■□□□ 1.22
DDX39A-204ENST00000586558 JMYQ8N9B5 988 aa22.67■■□□□ 1.22
DDX39A-204ENST00000586558 ESR2Q92731 530 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms