RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 CDCA5Q96FF9 252 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 NOL10Q9BSC4 688 aaKnown RBP9.7□□□□□ -0.86
SMAD4-204ENST00000586253 IDI2Q9BXS1 227 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 USP40Q9NVE5 1235 aa9.7□□□□□ -0.86
SMAD4-204ENST00000586253 GFRA3O60609 400 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 WDHD1O75717 1129 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-204ENST00000586253 CELF2O95319 508 aaKnown RBP9.69□□□□□ -0.86
SMAD4-204ENST00000586253 CYP7A1P22680 504 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 NF2P35240 595 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 ADD2P35612 726 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 MLLT3P42568 568 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-204ENST00000586253 RHBDL3P58872 404 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 CNTNAP1P78357 1384 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 RASA3Q14644 834 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 UBE3CQ15386 1083 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 SUPT20HL1Q3ZLR7 823 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 CST9Q5W186 159 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 GPIHBP1Q8IV16 184 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 EDC3Q96F86 508 aaKnown RBP9.69□□□□□ -0.86
SMAD4-204ENST00000586253 PAPPA2Q9BXP8 1791 aa9.69□□□□□ -0.86
SMAD4-204ENST00000586253 V9GY48 417 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-204ENST00000586253 FOCADQ5VW36 1801 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 COL2A1P02458 1487 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-204ENST00000586253 ZNF532Q9HCE3 1301 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 TCRBV5S4A2TA0A5A2 114 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 TCP10L2B9ZVM9 353 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 ENTPD3O75355 529 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 ZFYP08048 801 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-204ENST00000586253 CACNB3P54284 484 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 FMR1Q06787 632 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMAD4-204ENST00000586253 ADGRA1Q86SQ6 560 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 FAM151AQ8WW52 585 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 EVI5LQ96CN4 794 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 HOOK2Q96ED9 719 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 CCDC136Q96JN2 1154 aa9.68□□□□□ -0.86
SMAD4-204ENST00000586253 GBA2Q9HCG7 927 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-204ENST00000586253 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
SMAD4-204ENST00000586253 AATFQ9NY61 560 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMAD4-204ENST00000586253 SCAF8Q9UPN6 1271 aaKnown RBP9.68□□□□□ -0.86
SMAD4-204ENST00000586253 NFIAQ12857 509 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 DLK2Q6UY11 383 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 SAPCD2Q86UD0 394 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 TEX11Q8IYF3 940 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 C2orf69Q8N8R5 385 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 HHIPL1Q96JK4 782 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 TEPSINQ96N21 525 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 RIOK1Q9BRS2 568 aaKnown RBP9.67□□□□□ -0.86
SMAD4-204ENST00000586253 TMEM39BQ9GZU3 492 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 ZNF408Q9H9D4 720 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 TLL2Q9Y6L7 1015 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 CDK5RAP2Q96SN8 1893 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 SSC5DA1L4H1 1573 aa9.67□□□□□ -0.86
SMAD4-204ENST00000586253 ATRNL1Q5VV63 1379 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 MAGEB6P1A0A0J9YX57 407 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 UNCXA6NJT0 531 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 RASSF10A6NK89 507 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 RNF113AO15541 343 aaKnown RBP9.66□□□□□ -0.86
SMAD4-204ENST00000586253 PPP1R12BO60237 982 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-204ENST00000586253 RGS3P49796 1198 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 MAP3K11Q16584 847 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 NBPF12Q5TAG4 269 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-204ENST00000586253 PRAMEF18Q5VWM3 479 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 TRAF7Q6Q0C0 670 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 MIGA1Q8NAN2 632 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 SH3RF3Q8TEJ3 882 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-204ENST00000586253 APPBP2Q92624 585 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 FSD1Q9BTV5 496 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 PPP4R2Q9NY27 417 aa9.66□□□□□ -0.86
SMAD4-204ENST00000586253 FLT1P17948 1338 aa9.65□□□□□ -0.86
SMAD4-204ENST00000586253 AK9Q5TCS8 1911 aa9.65□□□□□ -0.86
SMAD4-204ENST00000586253 DYNLL1P63167 89 aaKnown RBP9.65□□□□□ -0.86
SMAD4-204ENST00000586253 TCP10Q12799 353 aa9.65□□□□□ -0.86
SMAD4-204ENST00000586253 PICALMQ13492 652 aa9.65□□□□□ -0.86
SMAD4-204ENST00000586253 DCAF15Q66K64 600 aa9.65□□□□□ -0.86
SMAD4-204ENST00000586253 ARMC9Q7Z3E5 817 aa9.65□□□□□ -0.86
SMAD4-204ENST00000586253 EMID1Q96A84 441 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-204ENST00000586253 CRNKL1Q9BZJ0 848 aaKnown RBP9.65□□□□□ -0.86
SMAD4-204ENST00000586253 OSBPL5Q9H0X9 879 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-204ENST00000586253 DHX36Q9H2U1 1008 aaKnown RBP9.65□□□□□ -0.86
SMAD4-204ENST00000586253 DDX4Q9NQI0 724 aaKnown RBP9.65□□□□□ -0.86
SMAD4-204ENST00000586253 ABT1Q9ULW3 272 aaKnown RBP9.65□□□□□ -0.86
SMAD4-204ENST00000586253 NRG2O14511 850 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-204ENST00000586253 IREB2P48200 963 aaKnown RBP9.64□□□□□ -0.87
SMAD4-204ENST00000586253 HUNKP57058 714 aa9.64□□□□□ -0.87
SMAD4-204ENST00000586253 MAP3K10Q02779 954 aa9.64□□□□□ -0.87
SMAD4-204ENST00000586253 TTC22Q5TAA0 569 aa9.64□□□□□ -0.87
SMAD4-204ENST00000586253 ZFPM1Q8IX07 1006 aa9.64□□□□□ -0.87
SMAD4-204ENST00000586253 TGFBRAP1Q8WUH2 860 aa9.64□□□□□ -0.87
SMAD4-204ENST00000586253 AIDAQ96BJ3 306 aa9.64□□□□□ -0.87
SMAD4-204ENST00000586253 CSRNP1Q96S65 589 aa9.64□□□□□ -0.87
SMAD4-204ENST00000586253 DDX60LQ5H9U9 1706 aaKnown RBP9.64□□□□□ -0.87
SMAD4-204ENST00000586253 MYH1P12882 1939 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 HIP1O00291 1037 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 RNF40O75150 1001 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 USP2O75604 605 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-204ENST00000586253 MBD4O95243 580 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 GNAT2P19087 354 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 ECE1P42892 770 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 USP5P45974 858 aa9.63□□□□□ -0.87
SMAD4-204ENST00000586253 PTGDRQ13258 359 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms