RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 NKX2-3Q8TAU0 364 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 CHMP4CQ96CF2 233 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 HHIPL1Q96JK4 782 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 NAPBQ9H115 298 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 EHD4Q9H223 541 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 ARPP21Q9UBL0 812 aaPredicted RBP14.97□□□□□ -0.01
VMP1-202ENST00000585847 TAOK2Q9UL54 1235 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 MYH8P13535 1937 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 ROBO3Q96MS0 1386 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 SHMT1P34896 483 aa14.96□□□□□ -0.01
VMP1-202ENST00000585847 TDO2P48775 406 aa14.96□□□□□ -0.01
VMP1-202ENST00000585847 JAG1P78504 1218 aa14.96□□□□□ -0.01
VMP1-202ENST00000585847 SHROOM1Q2M3G4 852 aaPredicted RBP14.96□□□□□ -0.01
VMP1-202ENST00000585847 CREB3L3Q68CJ9 461 aa14.96□□□□□ -0.01
VMP1-202ENST00000585847 TTC6Q86TZ1 520 aa14.96□□□□□ -0.01
VMP1-202ENST00000585847 FOXP4Q8IVH2 680 aaPredicted RBP14.96□□□□□ -0.01
VMP1-202ENST00000585847 GBA2Q9HCG7 927 aaPredicted RBP14.96□□□□□ -0.01
VMP1-202ENST00000585847 ANAPC4Q9UJX5 808 aa14.96□□□□□ -0.01
VMP1-202ENST00000585847 TAF6LQ9Y6J9 622 aa14.96□□□□□ -0.01
VMP1-202ENST00000585847 PHIPQ8WWQ0 1821 aa14.95□□□□□ -0.02
VMP1-202ENST00000585847 MINDY4BA8MYZ0 360 aa14.95□□□□□ -0.02
VMP1-202ENST00000585847 HLA-DOAP06340 250 aa14.95□□□□□ -0.02
VMP1-202ENST00000585847 INPP5BP32019 993 aa14.95□□□□□ -0.02
VMP1-202ENST00000585847 PPARAQ07869 468 aa14.95□□□□□ -0.02
VMP1-202ENST00000585847 LDLRAD1Q5T700 205 aa14.95□□□□□ -0.02
VMP1-202ENST00000585847 TATDN1Q6P1N9 297 aa14.95□□□□□ -0.02
VMP1-202ENST00000585847 C16orf86Q6ZW13 317 aa14.95□□□□□ -0.02
VMP1-202ENST00000585847 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.95□□□□□ -0.02
VMP1-202ENST00000585847 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
VMP1-202ENST00000585847 INCENPQ9NQS7 918 aa14.95□□□□□ -0.02
VMP1-202ENST00000585847 ANGEL1Q9UNK9 670 aaKnown RBP14.95□□□□□ -0.02
VMP1-202ENST00000585847 GREB1LQ9C091 1923 aaPredicted RBP14.95□□□□□ -0.02
VMP1-202ENST00000585847 DOCK1Q14185 1865 aa14.95□□□□□ -0.02
VMP1-202ENST00000585847 WDR19Q8NEZ3 1342 aa14.94□□□□□ -0.02
VMP1-202ENST00000585847 UBE2Q2LH0YL09 131 aa14.94□□□□□ -0.02
VMP1-202ENST00000585847 K7ELQ4 463 aaPredicted RBP14.94□□□□□ -0.02
VMP1-202ENST00000585847 SLC27A2O14975 620 aa14.94□□□□□ -0.02
VMP1-202ENST00000585847 FGRP09769 529 aa14.94□□□□□ -0.02
VMP1-202ENST00000585847 HAND2P61296 217 aa14.94□□□□□ -0.02
VMP1-202ENST00000585847 CTDSPL2Q05D32 466 aa14.94□□□□□ -0.02
VMP1-202ENST00000585847 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.94□□□□□ -0.02
VMP1-202ENST00000585847 ZNF341Q9BYN7 854 aa14.94□□□□□ -0.02
VMP1-202ENST00000585847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.94□□□□□ -0.02
VMP1-202ENST00000585847 HERC5Q9UII4 1024 aaKnown RBP14.94□□□□□ -0.02
VMP1-202ENST00000585847 SERPINB13Q9UIV8 391 aa14.94□□□□□ -0.02
VMP1-202ENST00000585847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
VMP1-202ENST00000585847 SNX14Q9Y5W7 946 aa14.94□□□□□ -0.02
VMP1-202ENST00000585847 CYP46A1Q9Y6A2 500 aa14.94□□□□□ -0.02
VMP1-202ENST00000585847 NF2P35240 595 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 CDK8P49336 464 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 HUNKP57058 714 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 FKBP1BP68106 108 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 NOGQ13253 232 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 DCAF15Q66K64 600 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 TBC1D10CQ8IV04 446 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 STK11IPQ8N1F8 1099 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 MTA3Q9BTC8 594 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 MCOLN1Q9GZU1 580 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 ZSWIM6Q9HCJ5 1215 aa14.93□□□□□ -0.02
VMP1-202ENST00000585847 PPP1R12BO60237 982 aaPredicted RBP14.92□□□□□ -0.02
VMP1-202ENST00000585847 CYP21A2P08686 494 aa14.92□□□□□ -0.02
VMP1-202ENST00000585847 PDIA4P13667 645 aaKnown RBP14.92□□□□□ -0.02
VMP1-202ENST00000585847 DGKZQ13574 1117 aa14.92□□□□□ -0.02
VMP1-202ENST00000585847 FBXL16Q8N461 479 aa14.92□□□□□ -0.02
VMP1-202ENST00000585847 C2orf69Q8N8R5 385 aa14.92□□□□□ -0.02
VMP1-202ENST00000585847 ZKSCAN4Q969J2 545 aaPredicted RBP14.92□□□□□ -0.02
VMP1-202ENST00000585847 HOOK2Q96ED9 719 aa14.92□□□□□ -0.02
VMP1-202ENST00000585847 CLMNQ96JQ2 1002 aa14.92□□□□□ -0.02
VMP1-202ENST00000585847 WRNIP1Q96S55 665 aa14.92□□□□□ -0.02
VMP1-202ENST00000585847 TBC1D2Q9BYX2 928 aa14.92□□□□□ -0.02
VMP1-202ENST00000585847 RNF41Q9H4P4 317 aaPredicted RBP14.92□□□□□ -0.02
VMP1-202ENST00000585847 CNNM2Q9H8M5 875 aa14.92□□□□□ -0.02
VMP1-202ENST00000585847 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.92□□□□□ -0.02
VMP1-202ENST00000585847 SNCAIPQ9Y6H5 919 aa14.92□□□□□ -0.02
VMP1-202ENST00000585847 ZNF213O14771 459 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 SLC34A2O95436 690 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 GUCY1A2P33402 732 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 NEK4P51957 841 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 MAP3K9P80192 1104 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 TRDNQ13061 729 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 COL9A3Q14050 684 aaPredicted RBP14.91□□□□□ -0.02
VMP1-202ENST00000585847 NOL9Q5SY16 702 aaKnown RBP14.91□□□□□ -0.02
VMP1-202ENST00000585847 BLOC1S2Q6QNY1 142 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 STOX1Q6ZVD7 989 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 ARMC9Q7Z3E5 817 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 AMOTL1Q8IY63 956 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 CRACR2BQ8N4Y2 399 aaPredicted RBP14.91□□□□□ -0.02
VMP1-202ENST00000585847 ZSCAN31Q96LW9 406 aaPredicted RBP14.91□□□□□ -0.02
VMP1-202ENST00000585847 SH2B1Q9NRF2 756 aaPredicted RBP14.91□□□□□ -0.02
VMP1-202ENST00000585847 SWAP70Q9UH65 585 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 CASP8AP2Q9UKL3 1982 aa14.91□□□□□ -0.02
VMP1-202ENST00000585847 PRDM1O75626 825 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 GDF11O95390 407 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 AKR1B1P15121 316 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 RASA1P20936 1047 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 GJA5P36382 358 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 CAP2P40123 477 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 IREB2P48200 963 aaKnown RBP14.9□□□□□ -0.02
VMP1-202ENST00000585847 RGS19P49795 217 aa14.9□□□□□ -0.02
VMP1-202ENST00000585847 VGLL4Q14135 290 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms