RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 TRIM32Q13049 653 aa11.42□□□□□ -0.58
SDF2-203ENST00000585749 SMCR8Q8TEV9 937 aaPredicted RBP11.42□□□□□ -0.58
SDF2-203ENST00000585749 OGDHLQ9ULD0 1010 aa11.42□□□□□ -0.58
SDF2-203ENST00000585749 AFG3L2Q9Y4W6 797 aa11.42□□□□□ -0.58
SDF2-203ENST00000585749 PLXNB2O15031 1838 aa11.42□□□□□ -0.58
SDF2-203ENST00000585749 DOCK1Q14185 1865 aa11.41□□□□□ -0.58
SDF2-203ENST00000585749 PHF20L1A8MW92 1017 aa11.41□□□□□ -0.58
SDF2-203ENST00000585749 FRAT2O75474 233 aaPredicted RBP11.41□□□□□ -0.58
SDF2-203ENST00000585749 PTPRAP18433 802 aa11.41□□□□□ -0.58
SDF2-203ENST00000585749 NFIAQ12857 509 aa11.41□□□□□ -0.58
SDF2-203ENST00000585749 GADL1Q6ZQY3 521 aa11.41□□□□□ -0.58
SDF2-203ENST00000585749 SCYL3Q8IZE3 742 aa11.41□□□□□ -0.58
SDF2-203ENST00000585749 ANKRD13CQ8N6S4 541 aa11.41□□□□□ -0.58
SDF2-203ENST00000585749 HMX1Q9NP08 348 aaPredicted RBP11.41□□□□□ -0.58
SDF2-203ENST00000585749 SUGT1Q9Y2Z0 365 aa11.41□□□□□ -0.58
SDF2-203ENST00000585749 ZHX2Q9Y6X8 837 aa11.41□□□□□ -0.58
SDF2-203ENST00000585749 COL6A1P12109 1028 aa11.4□□□□□ -0.58
SDF2-203ENST00000585749 MDM2Q00987 491 aaPredicted RBP11.4□□□□□ -0.58
SDF2-203ENST00000585749 FAM110CQ1W6H9 321 aa11.4□□□□□ -0.58
SDF2-203ENST00000585749 CDC42EP5Q6NZY7 148 aa11.4□□□□□ -0.58
SDF2-203ENST00000585749 PANK1Q8TE04 598 aa11.4□□□□□ -0.58
SDF2-203ENST00000585749 SSH3Q8TE77 659 aa11.4□□□□□ -0.58
SDF2-203ENST00000585749 FAM198AQ9UFP1 575 aa11.4□□□□□ -0.58
SDF2-203ENST00000585749 AKAP2Q9Y2D5 859 aa11.4□□□□□ -0.58
SDF2-203ENST00000585749 DAGLAQ9Y4D2 1042 aa11.4□□□□□ -0.58
SDF2-203ENST00000585749 MAST2Q6P0Q8 1798 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 A0A1B0GUL7 405 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 SEMA3EO15041 775 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 ATP8B2P98198 1209 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 TFCP2Q12800 502 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 MVPQ14764 893 aaKnown RBP11.39□□□□□ -0.59
SDF2-203ENST00000585749 ZFPM1Q8IX07 1006 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 WDR66Q8TBY9 1149 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 C1orf115Q9H7X2 142 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 PICK1Q9NRD5 415 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 GNL3LQ9NVN8 582 aaKnown RBP11.39□□□□□ -0.59
SDF2-203ENST00000585749 GJD2Q9UKL4 321 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 AGTPBP1Q9UPW5 1226 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 LOC285556D6RIA3 1793 aa11.39□□□□□ -0.59
SDF2-203ENST00000585749 PDS5AQ29RF7 1337 aaKnown RBP11.38□□□□□ -0.59
SDF2-203ENST00000585749 DNAH12Q6ZR08 3092 aa11.38□□□□□ -0.59
SDF2-203ENST00000585749 COL9A1P20849 921 aa11.38□□□□□ -0.59
SDF2-203ENST00000585749 PHKA1P46020 1223 aa11.38□□□□□ -0.59
SDF2-203ENST00000585749 G3BP1Q13283 466 aaKnown RBP eCLIP11.38□□□□□ -0.59
SDF2-203ENST00000585749 LRRC26Q2I0M4 334 aa11.38□□□□□ -0.59
SDF2-203ENST00000585749 TREML2Q5T2D2 321 aa11.38□□□□□ -0.59
SDF2-203ENST00000585749 MAP3K21Q5TCX8 1036 aa11.38□□□□□ -0.59
SDF2-203ENST00000585749 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
SDF2-203ENST00000585749 MAFAQ8NHW3 353 aaPredicted RBP11.38□□□□□ -0.59
SDF2-203ENST00000585749 TRIB2Q92519 343 aa11.38□□□□□ -0.59
SDF2-203ENST00000585749 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
SDF2-203ENST00000585749 CDX2Q99626 313 aaPredicted RBP11.38□□□□□ -0.59
SDF2-203ENST00000585749 DDX19BQ9UMR2 479 aa11.38□□□□□ -0.59
SDF2-203ENST00000585749 SALL1Q9NSC2 1324 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 TRIM75PA6NK02 468 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 ADORA1P30542 326 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 DIXDC1Q155Q3 683 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 CCDC102BQ68D86 513 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 CEP85Q6P2H3 762 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 GPR108Q9NPR9 543 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.37□□□□□ -0.59
SDF2-203ENST00000585749 DENND2AQ9ULE3 1009 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
SDF2-203ENST00000585749 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.37□□□□□ -0.59
SDF2-203ENST00000585749 LTBP2Q14767 1821 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 FRMPD3Q5JV73 1810 aa11.37□□□□□ -0.59
SDF2-203ENST00000585749 SLURP2P0DP57 97 aa11.36□□□□□ -0.59
SDF2-203ENST00000585749 TIMM10P62072 90 aa11.36□□□□□ -0.59
SDF2-203ENST00000585749 MAP3K10Q02779 954 aa11.36□□□□□ -0.59
SDF2-203ENST00000585749 PDE3AQ14432 1141 aa11.36□□□□□ -0.59
SDF2-203ENST00000585749 SH3BP5LQ7L8J4 393 aa11.36□□□□□ -0.59
SDF2-203ENST00000585749 XAGE2Q96GT9 111 aa11.36□□□□□ -0.59
SDF2-203ENST00000585749 CHMP4BQ9H444 224 aaKnown RBP11.36□□□□□ -0.59
SDF2-203ENST00000585749 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
SDF2-203ENST00000585749 COG6Q9Y2V7 657 aa11.36□□□□□ -0.59
SDF2-203ENST00000585749 RFX7Q2KHR2 1363 aa11.36□□□□□ -0.59
SDF2-203ENST00000585749 CTNND1O60716 968 aaKnown RBP11.35□□□□□ -0.59
SDF2-203ENST00000585749 SURF6O75683 361 aaKnown RBP11.35□□□□□ -0.59
SDF2-203ENST00000585749 GCLCP48506 637 aaPredicted RBP11.35□□□□□ -0.59
SDF2-203ENST00000585749 OS9Q13438 667 aaPredicted RBP11.35□□□□□ -0.59
SDF2-203ENST00000585749 RASGRF1Q13972 1273 aa11.35□□□□□ -0.59
SDF2-203ENST00000585749 CCDC84Q86UT8 332 aaPredicted RBP11.35□□□□□ -0.59
SDF2-203ENST00000585749 ZGPATQ8N5A5 531 aaKnown RBP11.35□□□□□ -0.59
SDF2-203ENST00000585749 PROCA1Q8NCQ7 364 aaPredicted RBP11.35□□□□□ -0.59
SDF2-203ENST00000585749 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
SDF2-203ENST00000585749 ZBTB40Q9NUA8 1239 aa11.35□□□□□ -0.59
SDF2-203ENST00000585749 USP40Q9NVE5 1235 aa11.35□□□□□ -0.59
SDF2-203ENST00000585749 CYP2B6P20813 491 aa11.34□□□□□ -0.59
SDF2-203ENST00000585749 ARID4AP29374 1257 aaPredicted RBP11.34□□□□□ -0.59
SDF2-203ENST00000585749 PRDX5P30044 214 aa11.34□□□□□ -0.59
SDF2-203ENST00000585749 RGS3P49796 1198 aa11.34□□□□□ -0.59
SDF2-203ENST00000585749 TNNI3KQ59H18 835 aa11.34□□□□□ -0.59
SDF2-203ENST00000585749 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
SDF2-203ENST00000585749 MYLIPQ8WY64 445 aa11.34□□□□□ -0.59
SDF2-203ENST00000585749 YTHDC1Q96MU7 727 aaKnown RBP11.34□□□□□ -0.59
SDF2-203ENST00000585749 NEUROD6Q96NK8 337 aa11.34□□□□□ -0.59
SDF2-203ENST00000585749 IDI2Q9BXS1 227 aa11.34□□□□□ -0.59
SDF2-203ENST00000585749 SEMA6BQ9H3T3 888 aa11.34□□□□□ -0.59
SDF2-203ENST00000585749 RAPGEFL1Q9UHV5 662 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms