RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 A0A1W2PQ27 194 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 A0A1W2PQ64 194 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 A0A1W2PQD8 194 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 RGS22Q8NE09 1264 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 RNF14Q9UBS8 474 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 H7C1D1 291 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 TMEM63CQ9P1W3 806 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 PA2G4Q9UQ80 394 aaKnown RBP8.13□□□□□ -1.11
CDH8-214ENST00000585315 RGS16O15492 202 aaPredicted RBP8.13□□□□□ -1.11
CDH8-214ENST00000585315 MTHFSDQ2M296 383 aaKnown RBP8.13□□□□□ -1.11
CDH8-214ENST00000585315 TNNI3KQ59H18 835 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 FPGT-TNNI3KV9GXZ4 949 aa8.13□□□□□ -1.11
CDH8-214ENST00000585315 SMIM23A6NLE4 172 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 TROVE2P10155 538 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDH8-214ENST00000585315 TFCP2Q12800 502 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 SFMBT2Q5VUG0 894 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 SND1Q7KZF4 910 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDH8-214ENST00000585315 EYA3Q99504 573 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 PCP11498 1178 aaKnown RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 NONOQ15233 471 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDH8-214ENST00000585315 GALNT17Q6IS24 598 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 PLBD2Q8NHP8 589 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 METTL22Q9BUU2 404 aaPredicted RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 Q9H521 79 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 CTNND2Q9UQB3 1225 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 EDC4Q6P2E9 1401 aaKnown RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 CFAP43Q8NDM7 1665 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 LETM2Q2VYF4 491 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 RNF168Q8IYW5 571 aaPredicted RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 ARHGEF2Q92974 986 aaKnown RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 XPO4Q9C0E2 1151 aaKnown RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 AGTPBP1Q9UPW5 1226 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 MAST3O60307 1309 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 SH3TC1Q8TE82 1336 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 TEX14Q8IWB6 1497 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 E7EVH7 732 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 CMA1P23946 247 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 HSP90AA5PQ58FG0 334 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 TSPYL6Q8N831 410 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 TEKT1Q969V4 418 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 TYW1Q9NV66 732 aaKnown RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 KDM5DQ9BY66 1539 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 CEP104O60308 925 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 RNASELQ05823 741 aaKnown RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 ITIH3Q06033 890 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 RETREG2Q8NC44 543 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 MYCBPQ99417 103 aaPredicted RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 HYOU1Q9Y4L1 999 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 IRS4O14654 1257 aaPredicted RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 BZW2Q9Y6E2 419 aaKnown RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 KDM3AQ9Y4C1 1321 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 GPAA1O43292 621 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 NT5C2P49902 561 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 BBOF1Q8ND07 529 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 MIS12Q9H081 205 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 BICC1Q9H694 974 aaKnown RBP8.12□□□□□ -1.11
CDH8-214ENST00000585315 NIP7Q9Y221 180 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDH8-214ENST00000585315 TACC3Q9Y6A5 838 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 ATP5JP18859 108 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 BIRC3Q13489 604 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 KRT40Q6A162 431 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 VTI1AQ96AJ9 217 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 CTTNBP2NLQ9P2B4 639 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 LRWD1Q9UFC0 647 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 SBNO1A3KN83 1393 aa8.12□□□□□ -1.11
CDH8-214ENST00000585315 KRT15P19012 456 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 STAT1P42224 750 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 ARHGAP4P98171 946 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 HERC4Q5GLZ8 1057 aaPredicted RBP8.11□□□□□ -1.11
CDH8-214ENST00000585315 REXO1Q8N1G1 1221 aaKnown RBP8.11□□□□□ -1.11
CDH8-214ENST00000585315 KIFC2Q96AC6 838 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 AMFRQ9UKV5 643 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 ZNF215Q9UL58 517 aaPredicted RBP8.11□□□□□ -1.11
CDH8-214ENST00000585315 RGS12O14924 1447 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 IGSF3O75054 1194 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 MBD4O95243 580 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 CCDC105Q8IYK2 499 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 GRK7Q8WTQ7 553 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 CCT6BQ92526 530 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 A0A1W2PP64 1363 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 PHACTR3Q96KR7 559 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 CDC25BP30305 580 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 CTNNA1P35221 906 aaKnown RBP8.11□□□□□ -1.11
CDH8-214ENST00000585315 METTL14Q9HCE5 456 aaKnown RBP8.11□□□□□ -1.11
CDH8-214ENST00000585315 PNMA2Q9UL42 364 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 ABCC10Q5T3U5 1492 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 CTTNBP2Q8WZ74 1663 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 SBNO2Q9Y2G9 1366 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 MAN1A1P33908 653 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 CWF19L2Q2TBE0 894 aaKnown RBP8.11□□□□□ -1.11
CDH8-214ENST00000585315 CDAN1Q8IWY9 1227 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 CEP120Q8N960 986 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 DNM3Q9UQ16 869 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 XRCC5P13010 732 aaKnown RBP8.11□□□□□ -1.11
CDH8-214ENST00000585315 IL2RBP14784 551 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 PHBP35232 272 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 SLMAPQ14BN4 828 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 ZNF174Q15697 407 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 TMEM110-MUSTN1A8MSY1 372 aa8.11□□□□□ -1.11
CDH8-214ENST00000585315 N4BP1O75113 896 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms