RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 C19orf81C9J6K1 198 aa21.59■■□□□ 1.05
SRSF1-209ENST00000585096 USP17L10C9JJH3 530 aa21.59■■□□□ 1.05
SRSF1-209ENST00000585096 CTGFP29279 349 aa21.59■■□□□ 1.05
SRSF1-209ENST00000585096 MTMR2Q13614 643 aa21.59■■□□□ 1.05
SRSF1-209ENST00000585096 UBE3CQ15386 1083 aa21.59■■□□□ 1.05
SRSF1-209ENST00000585096 LCORLQ8N3X6 602 aa21.59■■□□□ 1.05
SRSF1-209ENST00000585096 MCM9Q9NXL9 1143 aa21.59■■□□□ 1.05
SRSF1-209ENST00000585096 PCDHB15Q9Y5E8 787 aa21.59■■□□□ 1.05
SRSF1-209ENST00000585096 GH2P01242 217 aa21.58■■□□□ 1.05
SRSF1-209ENST00000585096 PLCD1P51178 756 aa21.58■■□□□ 1.05
SRSF1-209ENST00000585096 CERKLQ49MI3 558 aaPredicted RBP21.58■■□□□ 1.05
SRSF1-209ENST00000585096 ZNF333Q96JL9 665 aa21.58■■□□□ 1.05
SRSF1-209ENST00000585096 TMEM106CQ9BVX2 250 aa21.58■■□□□ 1.05
SRSF1-209ENST00000585096 ARMT1Q9H993 441 aa21.58■■□□□ 1.05
SRSF1-209ENST00000585096 MBD4O95243 580 aa21.57■■□□□ 1.04
SRSF1-209ENST00000585096 GCLCP48506 637 aaPredicted RBP21.57■■□□□ 1.04
SRSF1-209ENST00000585096 RAET1EQ8TD07 263 aa21.57■■□□□ 1.04
SRSF1-209ENST00000585096 SDR42E1Q8WUS8 393 aa21.57■■□□□ 1.04
SRSF1-209ENST00000585096 CABP5Q9NP86 173 aa21.57■■□□□ 1.04
SRSF1-209ENST00000585096 DCP1AQ9NPI6 582 aaPredicted RBP21.57■■□□□ 1.04
SRSF1-209ENST00000585096 MYPNQ86TC9 1320 aa21.56■■□□□ 1.04
SRSF1-209ENST00000585096 ABCB5Q2M3G0 1257 aa21.56■■□□□ 1.04
SRSF1-209ENST00000585096 SHROOM1Q2M3G4 852 aaPredicted RBP21.56■■□□□ 1.04
SRSF1-209ENST00000585096 ANKRD13CQ8N6S4 541 aa21.56■■□□□ 1.04
SRSF1-209ENST00000585096 ATP8A2Q9NTI2 1148 aa21.56■■□□□ 1.04
SRSF1-209ENST00000585096 MYO5AQ9Y4I1 1855 aaKnown RBP21.56■■□□□ 1.04
SRSF1-209ENST00000585096 IRX3P78415 501 aaPredicted RBP21.55■■□□□ 1.04
SRSF1-209ENST00000585096 FAM110CQ1W6H9 321 aa21.55■■□□□ 1.04
SRSF1-209ENST00000585096 SH3TC2Q8TF17 1288 aa21.55■■□□□ 1.04
SRSF1-209ENST00000585096 DDRGK1Q96HY6 314 aa21.55■■□□□ 1.04
SRSF1-209ENST00000585096 CRBNQ96SW2 442 aa21.55■■□□□ 1.04
SRSF1-209ENST00000585096 ASCC2Q9H1I8 757 aaPredicted RBP21.55■■□□□ 1.04
SRSF1-209ENST00000585096 TAOK2Q9UL54 1235 aa21.55■■□□□ 1.04
SRSF1-209ENST00000585096 TNPO2O14787 897 aaKnown RBP21.54■■□□□ 1.04
SRSF1-209ENST00000585096 HOXA7P31268 230 aaPredicted RBP21.54■■□□□ 1.04
SRSF1-209ENST00000585096 SHMT1P34896 483 aa21.54■■□□□ 1.04
SRSF1-209ENST00000585096 GABPAQ06546 454 aa21.54■■□□□ 1.04
SRSF1-209ENST00000585096 RAB3GAP1Q15042 981 aa21.54■■□□□ 1.04
SRSF1-209ENST00000585096 SLFNL1Q499Z3 407 aa21.54■■□□□ 1.04
SRSF1-209ENST00000585096 USP17L2Q6R6M4 530 aa21.54■■□□□ 1.04
SRSF1-209ENST00000585096 AMOTL1Q8IY63 956 aa21.54■■□□□ 1.04
SRSF1-209ENST00000585096 SIPA1L1O43166 1804 aa21.53■■□□□ 1.04
SRSF1-209ENST00000585096 FOCADQ5VW36 1801 aa21.53■■□□□ 1.04
SRSF1-209ENST00000585096 POTEFA5A3E0 1075 aa21.53■■□□□ 1.04
SRSF1-209ENST00000585096 PRKCZQ05513 592 aa21.53■■□□□ 1.04
SRSF1-209ENST00000585096 FEZ1Q99689 392 aa21.53■■□□□ 1.04
SRSF1-209ENST00000585096 PHIPQ8WWQ0 1821 aa21.52■■□□□ 1.04
SRSF1-209ENST00000585096 PRKAB2O43741 272 aa21.52■■□□□ 1.04
SRSF1-209ENST00000585096 GRK4P32298 578 aa21.52■■□□□ 1.04
SRSF1-209ENST00000585096 KBTBD3Q8NAB2 608 aa21.52■■□□□ 1.04
SRSF1-209ENST00000585096 COA7Q96BR5 231 aa21.52■■□□□ 1.04
SRSF1-209ENST00000585096 ZBTB47Q9UFB7 747 aaPredicted RBP21.52■■□□□ 1.04
SRSF1-209ENST00000585096 SWAP70Q9UH65 585 aa21.52■■□□□ 1.04
SRSF1-209ENST00000585096 SLC4A4Q9Y6R1 1079 aa21.52■■□□□ 1.04
SRSF1-209ENST00000585096 TTC41PQ6P2S7 1318 aa21.52■■□□□ 1.03
SRSF1-209ENST00000585096 ERC2O15083 957 aa21.51■■□□□ 1.03
SRSF1-209ENST00000585096 CHGBP05060 677 aa21.51■■□□□ 1.03
SRSF1-209ENST00000585096 USP14P54578 494 aa21.51■■□□□ 1.03
SRSF1-209ENST00000585096 TSHZ3Q63HK5 1081 aa21.51■■□□□ 1.03
SRSF1-209ENST00000585096 EMILIN3Q9NT22 766 aa21.51■■□□□ 1.03
SRSF1-209ENST00000585096 HTTP42858 3142 aa21.5■■□□□ 1.03
SRSF1-209ENST00000585096 MPHOSPH10O00566 681 aaKnown RBP21.5■■□□□ 1.03
SRSF1-209ENST00000585096 MYCP01106 439 aaPredicted RBP21.5■■□□□ 1.03
SRSF1-209ENST00000585096 CYP2D6P10635 497 aa21.5■■□□□ 1.03
SRSF1-209ENST00000585096 LRRFIP1Q32MZ4 808 aaKnown RBP21.5■■□□□ 1.03
SRSF1-209ENST00000585096 SLAIN1Q8ND83 568 aa21.5■■□□□ 1.03
SRSF1-209ENST00000585096 C12orf42Q96LP6 360 aa21.5■■□□□ 1.03
SRSF1-209ENST00000585096 P2RX7Q99572 595 aaKnown RBP21.5■■□□□ 1.03
SRSF1-209ENST00000585096 KIAA1683Q9H0B3 1180 aa21.5■■□□□ 1.03
SRSF1-209ENST00000585096 PUS7LQ9H0K6 701 aaKnown RBP21.5■■□□□ 1.03
SRSF1-209ENST00000585096 GABRQQ9UN88 632 aa21.5■■□□□ 1.03
SRSF1-209ENST00000585096 CDK5RAP2Q96SN8 1893 aa21.49■■□□□ 1.03
SRSF1-209ENST00000585096 ZFYP08048 801 aaPredicted RBP21.49■■□□□ 1.03
SRSF1-209ENST00000585096 EN2P19622 333 aaPredicted RBP21.49■■□□□ 1.03
SRSF1-209ENST00000585096 FLT3LGP49771 235 aa21.49■■□□□ 1.03
SRSF1-209ENST00000585096 AAMPQ13685 434 aa21.49■■□□□ 1.03
SRSF1-209ENST00000585096 GTF3C2Q8WUA4 911 aaPredicted RBP21.49■■□□□ 1.03
SRSF1-209ENST00000585096 MORF4L1Q9UBU8 362 aa21.49■■□□□ 1.03
SRSF1-209ENST00000585096 BIN2Q9UBW5 565 aaPredicted RBP21.49■■□□□ 1.03
SRSF1-209ENST00000585096 USP17L12C9JPN9 530 aa21.48■■□□□ 1.03
SRSF1-209ENST00000585096 USP17L21D6R901 530 aa21.48■■□□□ 1.03
SRSF1-209ENST00000585096 RNF113AO15541 343 aaKnown RBP21.48■■□□□ 1.03
SRSF1-209ENST00000585096 GLRX3O76003 335 aaKnown RBP21.48■■□□□ 1.03
SRSF1-209ENST00000585096 HERVK_113P62684 666 aa21.48■■□□□ 1.03
SRSF1-209ENST00000585096 UBXN2AP68543 259 aa21.48■■□□□ 1.03
SRSF1-209ENST00000585096 EVX2Q03828 476 aa21.48■■□□□ 1.03
SRSF1-209ENST00000585096 IRF5Q13568 498 aa21.48■■□□□ 1.03
SRSF1-209ENST00000585096 ZYXQ15942 572 aaKnown RBP21.48■■□□□ 1.03
SRSF1-209ENST00000585096 C12orf60Q5U649 245 aa21.48■■□□□ 1.03
SRSF1-209ENST00000585096 GCC1Q96CN9 775 aa21.48■■□□□ 1.03
SRSF1-209ENST00000585096 PTPRFP10586 1907 aa21.47■■□□□ 1.03
SRSF1-209ENST00000585096 LOC285556D6RIA3 1793 aa21.47■■□□□ 1.03
SRSF1-209ENST00000585096 USP17L15C9J2P7 530 aa21.47■■□□□ 1.03
SRSF1-209ENST00000585096 USP17L13C9JLJ4 530 aa21.47■■□□□ 1.03
SRSF1-209ENST00000585096 USP17L11C9JVI0 530 aa21.47■■□□□ 1.03
SRSF1-209ENST00000585096 USP17L18D6R9N7 530 aa21.47■■□□□ 1.03
SRSF1-209ENST00000585096 USP17L22D6RA61 530 aa21.47■■□□□ 1.03
SRSF1-209ENST00000585096 USP17L17D6RBQ6 530 aa21.47■■□□□ 1.03
SRSF1-209ENST00000585096 USP17L19D6RCP7 530 aa21.47■■□□□ 1.03
SRSF1-209ENST00000585096 USP17L20D6RJB6 530 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms