RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 CARS2Q9HA77 564 aaKnown RBP5.56□□□□□ -1.52
VAPA-208ENST00000584796 ATP13A1Q9HD20 1204 aa5.56□□□□□ -1.52
VAPA-208ENST00000584796 C19orf73Q9NVV2 129 aa5.56□□□□□ -1.52
VAPA-208ENST00000584796 FAM53CQ9NYF3 392 aa5.56□□□□□ -1.52
VAPA-208ENST00000584796 TPX2Q9ULW0 747 aaKnown RBP5.56□□□□□ -1.52
VAPA-208ENST00000584796 ST14Q9Y5Y6 855 aa5.56□□□□□ -1.52
VAPA-208ENST00000584796 TACC3Q9Y6A5 838 aa5.56□□□□□ -1.52
VAPA-208ENST00000584796 CAPN6Q9Y6Q1 641 aa5.56□□□□□ -1.52
VAPA-208ENST00000584796 LRRC10BA6NIK2 292 aa5.55□□□□□ -1.52
VAPA-208ENST00000584796 FAM155AB1AL88 458 aaPredicted RBP5.55□□□□□ -1.52
VAPA-208ENST00000584796 GFRA2O00451 464 aa5.55□□□□□ -1.52
VAPA-208ENST00000584796 CST3P01034 146 aaPredicted RBP5.55□□□□□ -1.52
VAPA-208ENST00000584796 EIF4BP23588 611 aaKnown RBP5.55□□□□□ -1.52
VAPA-208ENST00000584796 AFMP43652 599 aa5.55□□□□□ -1.52
VAPA-208ENST00000584796 ETF1P62495 437 aaKnown RBP5.55□□□□□ -1.52
VAPA-208ENST00000584796 FYB2Q5VWT5 728 aa5.55□□□□□ -1.52
VAPA-208ENST00000584796 ZNF746Q6NUN9 644 aaPredicted RBP5.55□□□□□ -1.52
VAPA-208ENST00000584796 LETMD1Q6P1Q0 360 aa5.55□□□□□ -1.52
VAPA-208ENST00000584796 NPAS4Q8IUM7 802 aa5.55□□□□□ -1.52
VAPA-208ENST00000584796 FAM84AQ96KN4 292 aa5.55□□□□□ -1.52
VAPA-208ENST00000584796 PRPF40AO75400 957 aaKnown RBP5.54□□□□□ -1.52
VAPA-208ENST00000584796 GRK4P32298 578 aa5.54□□□□□ -1.52
VAPA-208ENST00000584796 FGD1P98174 961 aa5.54□□□□□ -1.52
VAPA-208ENST00000584796 CCDC85BQ15834 202 aaPredicted RBP5.54□□□□□ -1.52
VAPA-208ENST00000584796 PRAMEF13Q5VWM6 474 aa5.54□□□□□ -1.52
VAPA-208ENST00000584796 SPOCD1Q6ZMY3 1216 aa5.54□□□□□ -1.52
VAPA-208ENST00000584796 THAP5Q7Z6K1 395 aa5.54□□□□□ -1.52
VAPA-208ENST00000584796 RIN3Q8TB24 985 aa5.54□□□□□ -1.52
VAPA-208ENST00000584796 COX4I2Q96KJ9 171 aa5.54□□□□□ -1.52
VAPA-208ENST00000584796 SLC38A3Q99624 504 aa5.54□□□□□ -1.52
VAPA-208ENST00000584796 TIMELESSQ9UNS1 1208 aa5.54□□□□□ -1.52
VAPA-208ENST00000584796 H3BS24 57 aa5.53□□□□□ -1.52
VAPA-208ENST00000584796 GLI1P08151 1106 aa5.53□□□□□ -1.52
VAPA-208ENST00000584796 GDNFP39905 211 aa5.53□□□□□ -1.52
VAPA-208ENST00000584796 SEPT6Q14141 434 aa5.53□□□□□ -1.52
VAPA-208ENST00000584796 MLANAQ16655 118 aa5.53□□□□□ -1.52
VAPA-208ENST00000584796 CDKAL1Q5VV42 579 aa5.53□□□□□ -1.52
VAPA-208ENST00000584796 AGMOQ6ZNB7 445 aa5.53□□□□□ -1.52
VAPA-208ENST00000584796 CILP2Q8IUL8 1156 aa5.53□□□□□ -1.52
VAPA-208ENST00000584796 LIN37Q96GY3 246 aaPredicted RBP5.53□□□□□ -1.52
VAPA-208ENST00000584796 PCDHB5Q9Y5E4 795 aa5.53□□□□□ -1.52
VAPA-208ENST00000584796 AK5Q9Y6K8 562 aa5.53□□□□□ -1.52
VAPA-208ENST00000584796 KIR3DL1P43629 444 aa5.52□□□□□ -1.53
VAPA-208ENST00000584796 MRPL41Q8IXM3 137 aaKnown RBP5.52□□□□□ -1.53
VAPA-208ENST00000584796 KIRREL1Q96J84 757 aa5.52□□□□□ -1.53
VAPA-208ENST00000584796 TSPAN15O95858 294 aa5.51□□□□□ -1.53
VAPA-208ENST00000584796 CYP7A1P22680 504 aa5.51□□□□□ -1.53
VAPA-208ENST00000584796 LIG3P49916 1009 aa5.51□□□□□ -1.53
VAPA-208ENST00000584796 TNK2Q07912 1038 aa5.51□□□□□ -1.53
VAPA-208ENST00000584796 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
VAPA-208ENST00000584796 ALPK1Q96QP1 1244 aa5.51□□□□□ -1.53
VAPA-208ENST00000584796 TJP2Q9UDY2 1190 aa5.51□□□□□ -1.53
VAPA-208ENST00000584796 CBX7O95931 251 aa5.5□□□□□ -1.53
VAPA-208ENST00000584796 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
VAPA-208ENST00000584796 FBLN7Q53RD9 439 aa5.5□□□□□ -1.53
VAPA-208ENST00000584796 PIWIL2Q8TC59 973 aaKnown RBP5.5□□□□□ -1.53
VAPA-208ENST00000584796 XAGE3Q8WTP9 111 aa5.5□□□□□ -1.53
VAPA-208ENST00000584796 UBE2FQ969M7 185 aa5.5□□□□□ -1.53
VAPA-208ENST00000584796 CCDC120Q96HB5 630 aa5.5□□□□□ -1.53
VAPA-208ENST00000584796 DUSP9Q99956 384 aaKnown RBP5.5□□□□□ -1.53
VAPA-208ENST00000584796 TRAIPQ9BWF2 469 aa5.5□□□□□ -1.53
VAPA-208ENST00000584796 MIR1-1HGQ9H1L0 117 aa5.5□□□□□ -1.53
VAPA-208ENST00000584796 RNF19AQ9NV58 838 aa5.5□□□□□ -1.53
VAPA-208ENST00000584796 PATL2C9JE40 543 aaKnown RBP5.49□□□□□ -1.53
VAPA-208ENST00000584796 RBAK-RBAKDNI3L0D1 243 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 PGRP06401 933 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 TFE3P19532 575 aaPredicted RBP5.49□□□□□ -1.53
VAPA-208ENST00000584796 LMNB1P20700 586 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 TMEM67Q5HYA8 995 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 SLC6A19Q695T7 634 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 PRR23BQ6ZRT6 265 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 TMPRSS7Q7RTY8 843 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 CDH24Q86UP0 819 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 DNAJB8Q8NHS0 232 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 TMEM87BQ96K49 555 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 PPP1R16BQ96T49 567 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 DPH2Q9BQC3 489 aaPredicted RBP5.49□□□□□ -1.53
VAPA-208ENST00000584796 ADAM30Q9UKF2 790 aa5.49□□□□□ -1.53
VAPA-208ENST00000584796 ESR1P03372 595 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 KRT1P04264 644 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 RLBP1P12271 317 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 ETV3P41162 512 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 RAP1GAPP47736 663 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 RPL6Q02878 288 aaKnown RBP5.48□□□□□ -1.53
VAPA-208ENST00000584796 PDE4BQ07343 736 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 MAP3K11Q16584 847 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 TSNAXIP1Q2TAA8 658 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 MEI1Q5TIA1 1274 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 MPZL3Q6UWV2 235 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 MCATQ8IVS2 390 aaKnown RBP5.48□□□□□ -1.53
VAPA-208ENST00000584796 ACSF2Q96CM8 615 aaPredicted RBP5.48□□□□□ -1.53
VAPA-208ENST00000584796 Q96M66 194 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 NOC4LQ9BVI4 516 aaKnown RBP5.48□□□□□ -1.53
VAPA-208ENST00000584796 ZSWIM5Q9P217 1185 aa5.48□□□□□ -1.53
VAPA-208ENST00000584796 ANKRD33BA6NCL7 494 aa5.47□□□□□ -1.53
VAPA-208ENST00000584796 ST13P50502 369 aaKnown RBP5.47□□□□□ -1.53
VAPA-208ENST00000584796 GAB4Q2WGN9 574 aa5.47□□□□□ -1.53
VAPA-208ENST00000584796 EAPPQ56P03 285 aaPredicted RBP5.47□□□□□ -1.53
VAPA-208ENST00000584796 C1QL4Q86Z23 238 aa5.47□□□□□ -1.53
VAPA-208ENST00000584796 SLAMF8Q9P0V8 285 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms