RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.49■□□□□ 0.235e-15■■□□□ 13.7
CDK5RAP3-233ENST00000584186 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
CDK5RAP3-233ENST00000584186 SRRDQ9UH36 339 aa16.49■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ZBTB21Q9ULJ3 1066 aa16.49■□□□□ 0.23
CDK5RAP3-233ENST00000584186 MYPNQ86TC9 1320 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 MKI67P46013 3256 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 TCRBV5S4A2TA0A5A2 114 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 GH2P01242 217 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 RRP1P56182 461 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 PABPC4Q13310 644 aaKnown RBP eCLIP16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ANKRD13CQ8N6S4 541 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 RAET1EQ8TD07 263 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ZNF333Q96JL9 665 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 WDR18Q9BV38 432 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 TMEM106CQ9BVX2 250 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 DCTPP1Q9H773 170 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ARMT1Q9H993 441 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 MCM9Q9NXL9 1143 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 PTPRFP10586 1907 aa16.48■□□□□ 0.23
CDK5RAP3-233ENST00000584186 MYH1P12882 1939 aa16.47■□□□□ 0.23
CDK5RAP3-233ENST00000584186 PLCD1P51178 756 aa16.47■□□□□ 0.23
CDK5RAP3-233ENST00000584186 BACE1P56817 501 aa16.47■□□□□ 0.23
CDK5RAP3-233ENST00000584186 SDR42E1Q8WUS8 393 aa16.47■□□□□ 0.23
CDK5RAP3-233ENST00000584186 EHD4Q9H223 541 aa16.47■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ECHDC1Q9NTX5 307 aa16.47■□□□□ 0.23
CDK5RAP3-233ENST00000584186 GINM1Q9NU53 330 aa16.47■□□□□ 0.23
CDK5RAP3-233ENST00000584186 USP17L10C9JJH3 530 aa16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 MBD4O95243 580 aa16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 CHGBP05060 677 aa16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 EN2P19622 333 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ADD2P35612 726 aa16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 PRKCZQ05513 592 aa16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 RAB3GAP1Q15042 981 aa16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 CERKLQ49MI3 558 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 SH3D19Q5HYK7 790 aa16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 TSHZ3Q63HK5 1081 aa16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 GPATCH3Q96I76 525 aa16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 ASCC2Q9H1I8 757 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 PCDHB15Q9Y5E8 787 aa16.46■□□□□ 0.23
CDK5RAP3-233ENST00000584186 TNPO2O14787 897 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-233ENST00000584186 PRKAB2O43741 272 aa16.45■□□□□ 0.22
CDK5RAP3-233ENST00000584186 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-233ENST00000584186 EVX2Q03828 476 aa16.45■□□□□ 0.22
CDK5RAP3-233ENST00000584186 ZYXQ15942 572 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-233ENST00000584186 ABCB5Q2M3G0 1257 aa16.45■□□□□ 0.22
CDK5RAP3-233ENST00000584186 TATDN1Q6P1N9 297 aa16.45■□□□□ 0.22
CDK5RAP3-233ENST00000584186 FEZ1Q99689 392 aa16.45■□□□□ 0.22
CDK5RAP3-233ENST00000584186 BIN2Q9UBW5 565 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-233ENST00000584186 LOC285556D6RIA3 1793 aa16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 C19orf81C9J6K1 198 aa16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 CYP2D6P10635 497 aa16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 GRK4P32298 578 aa16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 SHMT1P34896 483 aa16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 GCLCP48506 637 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 ZSCAN25Q6NSZ9 544 aa16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 CABP5Q9NP86 173 aa16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 DCP1AQ9NPI6 582 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 GABRQQ9UN88 632 aa16.44■□□□□ 0.22
CDK5RAP3-233ENST00000584186 MPHOSPH10O00566 681 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-233ENST00000584186 UBE3CQ15386 1083 aa16.43■□□□□ 0.22
CDK5RAP3-233ENST00000584186 FAM110CQ1W6H9 321 aa16.43■□□□□ 0.22
CDK5RAP3-233ENST00000584186 USP17L2Q6R6M4 530 aa16.43■□□□□ 0.22
CDK5RAP3-233ENST00000584186 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
CDK5RAP3-233ENST00000584186 NAV1Q8NEY1 1877 aa16.43■□□□□ 0.22
CDK5RAP3-233ENST00000584186 FLT3LGP49771 235 aa16.42■□□□□ 0.22
CDK5RAP3-233ENST00000584186 COA7Q96BR5 231 aa16.42■□□□□ 0.22
CDK5RAP3-233ENST00000584186 DYNLL2Q96FJ2 89 aa16.42■□□□□ 0.22
CDK5RAP3-233ENST00000584186 P2RX7Q99572 595 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-233ENST00000584186 EMILIN3Q9NT22 766 aa16.42■□□□□ 0.22
CDK5RAP3-233ENST00000584186 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-233ENST00000584186 MTFR1Q15390 333 aa16.41■□□□□ 0.22
CDK5RAP3-233ENST00000584186 AMOTL1Q8IY63 956 aa16.41■□□□□ 0.22
CDK5RAP3-233ENST00000584186 SLC44A5Q8NCS7 719 aa16.41■□□□□ 0.22
CDK5RAP3-233ENST00000584186 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
CDK5RAP3-233ENST00000584186 DDRGK1Q96HY6 314 aa16.41■□□□□ 0.22
CDK5RAP3-233ENST00000584186 PUS7LQ9H0K6 701 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-233ENST00000584186 ATP8A2Q9NTI2 1148 aa16.41■□□□□ 0.22
CDK5RAP3-233ENST00000584186 SLC4A4Q9Y6R1 1079 aa16.41■□□□□ 0.22
CDK5RAP3-233ENST00000584186 MGAMO43451 1857 aa16.4■□□□□ 0.22
CDK5RAP3-233ENST00000584186 DDX60LQ5H9U9 1706 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-233ENST00000584186 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
CDK5RAP3-233ENST00000584186 ADCY3O60266 1144 aa16.4■□□□□ 0.22
CDK5RAP3-233ENST00000584186 PEX10O60683 326 aa16.4■□□□□ 0.22
CDK5RAP3-233ENST00000584186 ELNP15502 786 aa16.4■□□□□ 0.22
CDK5RAP3-233ENST00000584186 HERVK_113P62684 666 aa16.4■□□□□ 0.22
CDK5RAP3-233ENST00000584186 GABPAQ06546 454 aa16.4■□□□□ 0.22
CDK5RAP3-233ENST00000584186 SEPT2Q15019 361 aa16.4■□□□□ 0.22
CDK5RAP3-233ENST00000584186 SLAIN1Q8ND83 568 aa16.4■□□□□ 0.22
CDK5RAP3-233ENST00000584186 USP14P54578 494 aa16.39■□□□□ 0.21
CDK5RAP3-233ENST00000584186 UBXN2AP68543 259 aa16.39■□□□□ 0.21
CDK5RAP3-233ENST00000584186 KBTBD3Q8NAB2 608 aa16.39■□□□□ 0.21
CDK5RAP3-233ENST00000584186 OTUD7AQ8TE49 926 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-233ENST00000584186 RNF208Q9H0X6 261 aa16.39■□□□□ 0.21
CDK5RAP3-233ENST00000584186 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-233ENST00000584186 RBBP6Q7Z6E9 1792 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-233ENST00000584186 KIAA0100Q14667 2235 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-233ENST00000584186 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
CDK5RAP3-233ENST00000584186 USP17L21D6R901 530 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms