RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 IMMTQ16891 758 aaKnown RBP9.92□□□□□ -0.82
ERBB2-216ENST00000584014 ABCB5Q2M3G0 1257 aa9.92□□□□□ -0.82
ERBB2-216ENST00000584014 SHROOM1Q2M3G4 852 aaPredicted RBP9.92□□□□□ -0.82
ERBB2-216ENST00000584014 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.92□□□□□ -0.82
ERBB2-216ENST00000584014 ZNF444Q8N0Y2 327 aaPredicted RBP9.92□□□□□ -0.82
ERBB2-216ENST00000584014 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.92□□□□□ -0.82
ERBB2-216ENST00000584014 OPTNQ96CV9 577 aa9.92□□□□□ -0.82
ERBB2-216ENST00000584014 CAPNS2Q96L46 248 aa9.92□□□□□ -0.82
ERBB2-216ENST00000584014 CABP5Q9NP86 173 aa9.92□□□□□ -0.82
ERBB2-216ENST00000584014 CTNNA3Q9UI47 895 aa9.92□□□□□ -0.82
ERBB2-216ENST00000584014 TBC1D12O60347 775 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 CTNND1O60716 968 aaKnown RBP9.91□□□□□ -0.82
ERBB2-216ENST00000584014 AOC2O75106 756 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 GH2P01242 217 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 SHMT1P34896 483 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 ECE1P42892 770 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 RRP1BQ14684 758 aaKnown RBP9.91□□□□□ -0.82
ERBB2-216ENST00000584014 SBK1Q52WX2 424 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 FAM47AQ5JRC9 791 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 LDLRAD1Q5T700 205 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 MFSD6Q6ZSS7 791 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 SCYL3Q8IZE3 742 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 CHMP4CQ96CF2 233 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 DSCC1Q9BVC3 393 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 EHD4Q9H223 541 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 DNAJC18Q9H819 358 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 ZNF287Q9HBT7 754 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 SWAP70Q9UH65 585 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 RBM8AQ9Y5S9 174 aaKnown RBP9.91□□□□□ -0.82
ERBB2-216ENST00000584014 ZHX2Q9Y6X8 837 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 SIPA1L1O43166 1804 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 COL2A1P02458 1487 aaPredicted RBP9.91□□□□□ -0.82
ERBB2-216ENST00000584014 LAMB1P07942 1786 aa9.91□□□□□ -0.82
ERBB2-216ENST00000584014 OTOFQ9HC10 1997 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 WDR33Q9C0J8 1336 aaKnown RBP9.9□□□□□ -0.82
ERBB2-216ENST00000584014 TRIM75PA6NK02 468 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 PHF20L1A8MW92 1017 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 TSPY3P0CV98 308 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 TSPY8P0CW00 308 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 AKR1B1P15121 316 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 CAP2P40123 477 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 VEGFBP49765 207 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 JAG1P78504 1218 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 ALX1Q15699 326 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 ZYXQ15942 572 aaKnown RBP9.9□□□□□ -0.82
ERBB2-216ENST00000584014 C16orf86Q6ZW13 317 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 FEZ1Q99689 392 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 SNCAIPQ9Y6H5 919 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 ATAD5Q96QE3 1844 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 CEP350Q5VT06 3117 aa9.9□□□□□ -0.82
ERBB2-216ENST00000584014 DDX60LQ5H9U9 1706 aaKnown RBP9.9□□□□□ -0.83
ERBB2-216ENST00000584014 RASSF10A6NK89 507 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 TSPY2A6NKD2 308 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 REC8O95072 547 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 ASNSP08243 561 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 PTPRAP18433 802 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 TFAP4Q01664 338 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 KIF23Q02241 960 aaPredicted RBP9.89□□□□□ -0.83
ERBB2-216ENST00000584014 SPP2Q13103 211 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 SEPT2Q15019 361 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 MAP3K11Q16584 847 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 AKNAD1Q5T1N1 836 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 TATDN1Q6P1N9 297 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 ERO1BQ86YB8 467 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 RASAL3Q86YV0 1011 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 CLEC10AQ8IUN9 316 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 MAP4K1Q92918 833 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 WNK4Q96J92 1243 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 LSG1Q9H089 658 aaKnown RBP9.89□□□□□ -0.83
ERBB2-216ENST00000584014 ZNF112Q9UJU3 913 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 ZBTB21Q9ULJ3 1066 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 ISY1Q9ULR0 285 aaKnown RBP9.89□□□□□ -0.83
ERBB2-216ENST00000584014 MTMR7Q9Y216 660 aa9.89□□□□□ -0.83
ERBB2-216ENST00000584014 DOCK1Q14185 1865 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 USP17L5A8MUK1 530 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 B4E1Z4 1266 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 RASA1P20936 1047 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 MAP3K10Q02779 954 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 GABPAQ06546 454 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 TRDNQ13061 729 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 SPRYD7Q5W111 196 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 GADL1Q6ZQY3 521 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 TBC1D10CQ8IV04 446 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 ZIC5Q96T25 663 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 ZKSCAN3Q9BRR0 538 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 RNF41Q9H4P4 317 aaPredicted RBP9.88□□□□□ -0.83
ERBB2-216ENST00000584014 AS3MTQ9HBK9 375 aa9.88□□□□□ -0.83
ERBB2-216ENST00000584014 CCL15-CCL14A0A0B4J2E2 113 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 SPDYE5A6NIY4 337 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 IRF6O14896 467 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 SLC27A2O14975 620 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 CYP21A2P08686 494 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 SLC10A3P09131 477 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 GJA5P36382 358 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 PPATQ06203 517 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 CCL15Q16663 113 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 NOL9Q5SY16 702 aaKnown RBP9.87□□□□□ -0.83
ERBB2-216ENST00000584014 RNF20Q5VTR2 975 aa9.87□□□□□ -0.83
ERBB2-216ENST00000584014 CREB3L3Q68CJ9 461 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms