RNA–Protein interactions for RNA: ENST00000583053.1

CCDC57-217, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC57, Length 188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-217ENST00000583053 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-217ENST00000583053 C12orf60Q5U649 245 aa16.45■□□□□ 0.22
CCDC57-217ENST00000583053 GIMAP6Q6P9H5 292 aa16.45■□□□□ 0.22
CCDC57-217ENST00000583053 SEC62Q99442 399 aaKnown RBP16.45■□□□□ 0.22
CCDC57-217ENST00000583053 ZBTB21Q9ULJ3 1066 aa16.45■□□□□ 0.22
CCDC57-217ENST00000583053 GSG1L2A8MUP6 293 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 TRIM6-TRIM34B2RNG4 842 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 M0R2C6 588 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 PDHXO00330 501 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 CYP2D6P10635 497 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 SHMT1P34896 483 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 EVX2Q03828 476 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 CTR9Q6PD62 1173 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 WDR18Q9BV38 432 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 ARPP21Q9UBL0 812 aaPredicted RBP16.44■□□□□ 0.22
CCDC57-217ENST00000583053 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 CDK5RAP2Q96SN8 1893 aa16.44■□□□□ 0.22
CCDC57-217ENST00000583053 SIPA1L1O43166 1804 aa16.43■□□□□ 0.22
CCDC57-217ENST00000583053 PATL2C9JE40 543 aaKnown RBP16.43■□□□□ 0.22
CCDC57-217ENST00000583053 GH2P01242 217 aa16.43■□□□□ 0.22
CCDC57-217ENST00000583053 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
CCDC57-217ENST00000583053 GPAT2Q6NUI2 795 aa16.43■□□□□ 0.22
CCDC57-217ENST00000583053 GADL1Q6ZQY3 521 aa16.43■□□□□ 0.22
CCDC57-217ENST00000583053 RILPL2Q969X0 211 aa16.43■□□□□ 0.22
CCDC57-217ENST00000583053 CABP5Q9NP86 173 aa16.43■□□□□ 0.22
CCDC57-217ENST00000583053 CYP2D7A0A087X1C5 515 aa16.42■□□□□ 0.22
CCDC57-217ENST00000583053 TLR2O60603 784 aa16.42■□□□□ 0.22
CCDC57-217ENST00000583053 APPP05067 770 aa16.42■□□□□ 0.22
CCDC57-217ENST00000583053 ABCB5Q2M3G0 1257 aa16.42■□□□□ 0.22
CCDC57-217ENST00000583053 SBK1Q52WX2 424 aa16.42■□□□□ 0.22
CCDC57-217ENST00000583053 SH3D19Q5HYK7 790 aa16.42■□□□□ 0.22
CCDC57-217ENST00000583053 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
CCDC57-217ENST00000583053 DYNLL2Q96FJ2 89 aa16.42■□□□□ 0.22
CCDC57-217ENST00000583053 HELLSQ9NRZ9 838 aa16.42■□□□□ 0.22
CCDC57-217ENST00000583053 SLC45A1Q9Y2W3 748 aa16.42■□□□□ 0.22
CCDC57-217ENST00000583053 DDX60LQ5H9U9 1706 aaKnown RBP16.42■□□□□ 0.22
CCDC57-217ENST00000583053 DOCK1Q14185 1865 aa16.42■□□□□ 0.22
CCDC57-217ENST00000583053 USP17L10C9JJH3 530 aa16.41■□□□□ 0.22
CCDC57-217ENST00000583053 PDE4AP27815 886 aa16.41■□□□□ 0.22
CCDC57-217ENST00000583053 BACE1P56817 501 aa16.41■□□□□ 0.22
CCDC57-217ENST00000583053 SP3Q02447 781 aa16.41■□□□□ 0.22
CCDC57-217ENST00000583053 DGKZQ13574 1117 aa16.41■□□□□ 0.22
CCDC57-217ENST00000583053 C16orf86Q6ZW13 317 aa16.41■□□□□ 0.22
CCDC57-217ENST00000583053 CTU1Q7Z7A3 348 aaKnown RBP16.41■□□□□ 0.22
CCDC57-217ENST00000583053 IFNL3Q8IZI9 196 aa16.41■□□□□ 0.22
CCDC57-217ENST00000583053 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
CCDC57-217ENST00000583053 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
CCDC57-217ENST00000583053 AGTPBP1Q9UPW5 1226 aa16.41■□□□□ 0.22
CCDC57-217ENST00000583053 C19orf81C9J6K1 198 aa16.4■□□□□ 0.22
CCDC57-217ENST00000583053 SMIM22K7EJ46 135 aa16.4■□□□□ 0.22
CCDC57-217ENST00000583053 TDO2P48775 406 aa16.4■□□□□ 0.22
CCDC57-217ENST00000583053 CDK8P49336 464 aa16.4■□□□□ 0.22
CCDC57-217ENST00000583053 HMGCS2P54868 508 aa16.4■□□□□ 0.22
CCDC57-217ENST00000583053 MTMR2Q13614 643 aa16.4■□□□□ 0.22
CCDC57-217ENST00000583053 RAB3GAP1Q15042 981 aa16.4■□□□□ 0.22
CCDC57-217ENST00000583053 SLC44A5Q8NCS7 719 aa16.4■□□□□ 0.22
CCDC57-217ENST00000583053 PARK7Q99497 189 aaKnown RBP16.4■□□□□ 0.22
CCDC57-217ENST00000583053 MCOLN1Q9GZU1 580 aa16.4■□□□□ 0.22
CCDC57-217ENST00000583053 MYH1P12882 1939 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 MINDY4BA8MYZ0 360 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 MPHOSPH10O00566 681 aaKnown RBP16.39■□□□□ 0.21
CCDC57-217ENST00000583053 SDSP20132 328 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 MCMDC2Q4G0Z9 681 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 C17orf99Q6UX52 265 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 ERO1AQ96HE7 468 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 CCDC17Q96LX7 622 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 FAM227BQ96M60 508 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 TMOD4Q9NZQ9 345 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 NAV1Q8NEY1 1877 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 MYH7P12883 1935 aa16.39■□□□□ 0.21
CCDC57-217ENST00000583053 CYP2C8P10632 490 aa16.38■□□□□ 0.21
CCDC57-217ENST00000583053 GUCY1A2P33402 732 aa16.38■□□□□ 0.21
CCDC57-217ENST00000583053 PABPC4Q13310 644 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCDC57-217ENST00000583053 TREML2Q5T2D2 321 aa16.38■□□□□ 0.21
CCDC57-217ENST00000583053 CCDC129Q6ZRS4 1044 aa16.38■□□□□ 0.21
CCDC57-217ENST00000583053 TMEM179Q6ZVK1 233 aa16.38■□□□□ 0.21
CCDC57-217ENST00000583053 NAPBQ9H115 298 aa16.38■□□□□ 0.21
CCDC57-217ENST00000583053 A0A0D9SFI3 127 aa16.37■□□□□ 0.21
CCDC57-217ENST00000583053 NMIQ13287 307 aaPredicted RBP16.37■□□□□ 0.21
CCDC57-217ENST00000583053 SEPT2Q15019 361 aa16.37■□□□□ 0.21
CCDC57-217ENST00000583053 PKN2Q16513 984 aaKnown RBP16.37■□□□□ 0.21
CCDC57-217ENST00000583053 CD99L2Q8TCZ2 262 aa16.37■□□□□ 0.21
CCDC57-217ENST00000583053 CPA4Q9UI42 421 aa16.37■□□□□ 0.21
CCDC57-217ENST00000583053 PNMA3Q9UL41 463 aa16.37■□□□□ 0.21
CCDC57-217ENST00000583053 HIP1O00291 1037 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 FOXP2O15409 715 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 AKR1B1P15121 316 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 USP14P54578 494 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 TTC22Q5TAA0 569 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 IFFO2Q5TF58 517 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 USP17L2Q6R6M4 530 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 CENPQQ7L2Z9 268 aaPredicted RBP16.36■□□□□ 0.21
CCDC57-217ENST00000583053 SMCR8Q8TEV9 937 aaPredicted RBP16.36■□□□□ 0.21
CCDC57-217ENST00000583053 FEZ1Q99689 392 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 KIAA1683Q9H0B3 1180 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 EMILIN3Q9NT22 766 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 ADGRA2Q96PE1 1338 aa16.36■□□□□ 0.21
CCDC57-217ENST00000583053 ROBO3Q96MS0 1386 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms