RNA–Protein interactions for RNA: ENST00000582812.5

NDEL1-215, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-215ENST00000582812 USP6NLQ92738 828 aa11.19□□□□□ -0.62
NDEL1-215ENST00000582812 FRAT1Q92837 279 aaPredicted RBP11.19□□□□□ -0.62
NDEL1-215ENST00000582812 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
NDEL1-215ENST00000582812 MYO5AQ9Y4I1 1855 aaKnown RBP11.19□□□□□ -0.62
NDEL1-215ENST00000582812 PLXNB2O15031 1838 aa11.19□□□□□ -0.62
NDEL1-215ENST00000582812 COL6A3P12111 3177 aa11.18□□□□□ -0.62
NDEL1-215ENST00000582812 SURF6O75683 361 aaKnown RBP11.18□□□□□ -0.62
NDEL1-215ENST00000582812 MS4A1P11836 297 aa11.18□□□□□ -0.62
NDEL1-215ENST00000582812 TTC39AQ5SRH9 613 aa11.18□□□□□ -0.62
NDEL1-215ENST00000582812 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
NDEL1-215ENST00000582812 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
NDEL1-215ENST00000582812 COA7Q96BR5 231 aa11.18□□□□□ -0.62
NDEL1-215ENST00000582812 NOL10Q9BSC4 688 aaKnown RBP11.18□□□□□ -0.62
NDEL1-215ENST00000582812 HTATIP2Q9BUP3 242 aa11.18□□□□□ -0.62
NDEL1-215ENST00000582812 PIH1D3Q9NQM4 214 aaKnown RBP11.18□□□□□ -0.62
NDEL1-215ENST00000582812 GABRQQ9UN88 632 aa11.18□□□□□ -0.62
NDEL1-215ENST00000582812 TNPO2O14787 897 aaKnown RBP11.17□□□□□ -0.62
NDEL1-215ENST00000582812 HMGCRP04035 888 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 SLURP2P0DP57 97 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 ZAP70P43403 619 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 HMGCS2P54868 508 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 JAG1P78504 1218 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 GABPAQ06546 454 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 GADL1Q6ZQY3 521 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 RPAP2Q8IXW5 612 aaPredicted RBP11.17□□□□□ -0.62
NDEL1-215ENST00000582812 SOCS4Q8WXH5 440 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 RIOK1Q9BRS2 568 aaKnown RBP11.17□□□□□ -0.62
NDEL1-215ENST00000582812 KIAA1683Q9H0B3 1180 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 RNF208Q9H0X6 261 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 AATFQ9NY61 560 aaKnown RBP eCLIP11.17□□□□□ -0.62
NDEL1-215ENST00000582812 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
NDEL1-215ENST00000582812 ZBTB21Q9ULJ3 1066 aa11.17□□□□□ -0.62
NDEL1-215ENST00000582812 USP17L10C9JJH3 530 aa11.16□□□□□ -0.62
NDEL1-215ENST00000582812 H0YGN5 161 aa11.16□□□□□ -0.62
NDEL1-215ENST00000582812 INHAP05111 366 aa11.16□□□□□ -0.62
NDEL1-215ENST00000582812 TTF1Q15361 905 aaPredicted RBP11.16□□□□□ -0.62
NDEL1-215ENST00000582812 POTEEQ6S8J3 1075 aa11.16□□□□□ -0.62
NDEL1-215ENST00000582812 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
NDEL1-215ENST00000582812 UNC93B1Q9H1C4 597 aa11.16□□□□□ -0.62
NDEL1-215ENST00000582812 ZBTB40Q9NUA8 1239 aa11.16□□□□□ -0.62
NDEL1-215ENST00000582812 TLR7Q9NYK1 1049 aaKnown RBP11.16□□□□□ -0.62
NDEL1-215ENST00000582812 MYH1P12882 1939 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 RPTORQ8N122 1335 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 ZNF236Q9UL36 1845 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 FAM196BA6NMK8 535 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 FARP2O94887 1054 aaPredicted RBP11.15□□□□□ -0.62
NDEL1-215ENST00000582812 HLA-DOAP06340 250 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 HOXC6P09630 235 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 MAPK4P31152 587 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 MNX1P50219 401 aaPredicted RBP11.15□□□□□ -0.62
NDEL1-215ENST00000582812 HERVK_113P62684 666 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 MAP3K12Q12852 859 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 MORN1Q5T089 497 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 ANKRD13CQ8N6S4 541 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 TGFBRAP1Q8WUH2 860 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.15□□□□□ -0.62
NDEL1-215ENST00000582812 SERPINB13Q9UIV8 391 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 OGDHLQ9ULD0 1010 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 COLQQ9Y215 455 aaPredicted RBP11.15□□□□□ -0.62
NDEL1-215ENST00000582812 RABGAP1Q9Y3P9 1069 aa11.15□□□□□ -0.62
NDEL1-215ENST00000582812 TCRBV5S4A2TA0A5A2 114 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 USP14P54578 494 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 MTMR2Q13614 643 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 CCDC84Q86UT8 332 aaPredicted RBP11.14□□□□□ -0.63
NDEL1-215ENST00000582812 MAPKAPK5Q8IW41 473 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 ITPRIPQ8IWB1 547 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 GPRC5AQ8NFJ5 357 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 KIF1BPQ96EK5 621 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 P2RX7Q99572 595 aaKnown RBP11.14□□□□□ -0.63
NDEL1-215ENST00000582812 CHMP4BQ9H444 224 aaKnown RBP11.14□□□□□ -0.63
NDEL1-215ENST00000582812 SNRKQ9NRH2 765 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 EMILIN3Q9NT22 766 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 RBPJLQ9UBG7 517 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 NR2E3Q9Y5X4 410 aa11.14□□□□□ -0.63
NDEL1-215ENST00000582812 RAB11FIP3O75154 756 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 COL6A1P12109 1028 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 ELNP15502 786 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 CYP7A1P22680 504 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 BMP8BP34820 402 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 SHMT1P34896 483 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 HNRNPUQ00839 825 aaKnown RBP eCLIP11.13□□□□□ -0.63
NDEL1-215ENST00000582812 OS9Q13438 667 aaPredicted RBP11.13□□□□□ -0.63
NDEL1-215ENST00000582812 GPR153Q6NV75 609 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 SIRT2Q8IXJ6 389 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 RHPN1Q8TCX5 695 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.63
NDEL1-215ENST00000582812 TXNRD2Q9NNW7 524 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 TMOD4Q9NZQ9 345 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 DDX19BQ9UMR2 479 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 RLFQ13129 1914 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 ALPK3Q96L96 1907 aa11.13□□□□□ -0.63
NDEL1-215ENST00000582812 A0A0G2JMZ2 1700 aa11.12□□□□□ -0.63
NDEL1-215ENST00000582812 HMMRO75330 724 aa11.12□□□□□ -0.63
NDEL1-215ENST00000582812 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
NDEL1-215ENST00000582812 ERVK-24P63145 666 aa11.12□□□□□ -0.63
NDEL1-215ENST00000582812 IRX3P78415 501 aaPredicted RBP11.12□□□□□ -0.63
NDEL1-215ENST00000582812 TTC28Q96AY4 2481 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms