RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 TREML2Q5T2D2 321 aa22.61■■□□□ 1.21
LIMS2-218ENST00000582671 ZSCAN25Q6NSZ9 544 aa22.61■■□□□ 1.21
LIMS2-218ENST00000582671 GCC1Q96CN9 775 aa22.61■■□□□ 1.21
LIMS2-218ENST00000582671 ARHGAP39Q9C0H5 1083 aa22.61■■□□□ 1.21
LIMS2-218ENST00000582671 POLR3DP05423 398 aaPredicted RBP22.6■■□□□ 1.21
LIMS2-218ENST00000582671 CYP2D6P10635 497 aa22.6■■□□□ 1.21
LIMS2-218ENST00000582671 AAMPQ13685 434 aa22.6■■□□□ 1.21
LIMS2-218ENST00000582671 PARK7Q99497 189 aaKnown RBP22.6■■□□□ 1.21
LIMS2-218ENST00000582671 WDR18Q9BV38 432 aa22.6■■□□□ 1.21
LIMS2-218ENST00000582671 TBC1D2Q9BYX2 928 aa22.6■■□□□ 1.21
LIMS2-218ENST00000582671 EFCC1Q9HA90 598 aa22.6■■□□□ 1.21
LIMS2-218ENST00000582671 AS3MTQ9HBK9 375 aa22.6■■□□□ 1.21
LIMS2-218ENST00000582671 PTPN22Q9Y2R2 807 aa22.6■■□□□ 1.21
LIMS2-218ENST00000582671 SLC45A1Q9Y2W3 748 aa22.6■■□□□ 1.21
LIMS2-218ENST00000582671 MX1P20591 662 aa22.59■■□□□ 1.21
LIMS2-218ENST00000582671 CTGFP29279 349 aa22.59■■□□□ 1.21
LIMS2-218ENST00000582671 SHMT1P34896 483 aa22.59■■□□□ 1.21
LIMS2-218ENST00000582671 HMGCS2P54868 508 aa22.59■■□□□ 1.21
LIMS2-218ENST00000582671 LACTBP83111 547 aaPredicted RBP22.59■■□□□ 1.21
LIMS2-218ENST00000582671 GABPAQ06546 454 aa22.59■■□□□ 1.21
LIMS2-218ENST00000582671 GINM1Q9NU53 330 aa22.59■■□□□ 1.21
LIMS2-218ENST00000582671 AGTPBP1Q9UPW5 1226 aa22.59■■□□□ 1.21
LIMS2-218ENST00000582671 SMIM22K7EJ46 135 aa22.58■■□□□ 1.21
LIMS2-218ENST00000582671 ECM2O94769 699 aaPredicted RBP22.58■■□□□ 1.21
LIMS2-218ENST00000582671 GH2P01242 217 aa22.58■■□□□ 1.21
LIMS2-218ENST00000582671 SH3D19Q5HYK7 790 aa22.58■■□□□ 1.21
LIMS2-218ENST00000582671 PROCA1Q8NCQ7 364 aaPredicted RBP22.58■■□□□ 1.21
LIMS2-218ENST00000582671 GLRX3O76003 335 aaKnown RBP22.57■■□□□ 1.2
LIMS2-218ENST00000582671 IGHDP01880 384 aa22.57■■□□□ 1.2
LIMS2-218ENST00000582671 BCRP11274 1271 aa22.57■■□□□ 1.2
LIMS2-218ENST00000582671 MTMR2Q13614 643 aa22.57■■□□□ 1.2
LIMS2-218ENST00000582671 ATP8A2Q9NTI2 1148 aa22.57■■□□□ 1.2
LIMS2-218ENST00000582671 DOCK3Q8IZD9 2030 aa22.57■■□□□ 1.2
LIMS2-218ENST00000582671 ERC2O15083 957 aa22.56■■□□□ 1.2
LIMS2-218ENST00000582671 RNF113AO15541 343 aaKnown RBP22.56■■□□□ 1.2
LIMS2-218ENST00000582671 BACE1P56817 501 aa22.56■■□□□ 1.2
LIMS2-218ENST00000582671 CERKLQ49MI3 558 aaPredicted RBP22.56■■□□□ 1.2
LIMS2-218ENST00000582671 OSBP2Q969R2 916 aa22.56■■□□□ 1.2
LIMS2-218ENST00000582671 STRBPQ96SI9 672 aaKnown RBP22.56■■□□□ 1.2
LIMS2-218ENST00000582671 SLC4A4Q9Y6R1 1079 aa22.56■■□□□ 1.2
LIMS2-218ENST00000582671 CYP2D7A0A087X1C5 515 aa22.55■■□□□ 1.2
LIMS2-218ENST00000582671 SOX10P56693 466 aa22.55■■□□□ 1.2
LIMS2-218ENST00000582671 SMC5Q8IY18 1101 aa22.55■■□□□ 1.2
LIMS2-218ENST00000582671 SLC44A5Q8NCS7 719 aa22.55■■□□□ 1.2
LIMS2-218ENST00000582671 APPBP2Q92624 585 aa22.55■■□□□ 1.2
LIMS2-218ENST00000582671 DYNLL2Q96FJ2 89 aa22.55■■□□□ 1.2
LIMS2-218ENST00000582671 GUCY1A2P33402 732 aa22.54■■□□□ 1.2
LIMS2-218ENST00000582671 ABCB5Q2M3G0 1257 aa22.54■■□□□ 1.2
LIMS2-218ENST00000582671 RWDD1Q9H446 243 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-218ENST00000582671 ZBTB47Q9UFB7 747 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-218ENST00000582671 USP17L10C9JJH3 530 aa22.53■■□□□ 1.2
LIMS2-218ENST00000582671 USP17L12C9JPN9 530 aa22.53■■□□□ 1.2
LIMS2-218ENST00000582671 USP17L21D6R901 530 aa22.53■■□□□ 1.2
LIMS2-218ENST00000582671 M0R2C6 588 aa22.53■■□□□ 1.2
LIMS2-218ENST00000582671 RGS19P49795 217 aa22.53■■□□□ 1.2
LIMS2-218ENST00000582671 KIF22Q14807 665 aa22.53■■□□□ 1.2
LIMS2-218ENST00000582671 C12orf60Q5U649 245 aa22.53■■□□□ 1.2
LIMS2-218ENST00000582671 STAP2Q9UGK3 403 aa22.53■■□□□ 1.2
LIMS2-218ENST00000582671 PTCH2Q9Y6C5 1203 aa22.53■■□□□ 1.2
LIMS2-218ENST00000582671 RBBP6Q7Z6E9 1792 aaKnown RBP22.53■■□□□ 1.2
LIMS2-218ENST00000582671 C19orf81C9J6K1 198 aa22.52■■□□□ 1.2
LIMS2-218ENST00000582671 ZFYP08048 801 aaPredicted RBP22.52■■□□□ 1.2
LIMS2-218ENST00000582671 PSMC4P43686 418 aa22.52■■□□□ 1.2
LIMS2-218ENST00000582671 PDE1AP54750 535 aa22.52■■□□□ 1.2
LIMS2-218ENST00000582671 RAB3GAP1Q15042 981 aa22.52■■□□□ 1.2
LIMS2-218ENST00000582671 ARHGEF6Q15052 776 aa22.52■■□□□ 1.2
LIMS2-218ENST00000582671 B4GALNT3Q6L9W6 998 aa22.52■■□□□ 1.2
LIMS2-218ENST00000582671 SMCR8Q8TEV9 937 aaPredicted RBP22.52■■□□□ 1.2
LIMS2-218ENST00000582671 TRIM47Q96LD4 638 aa22.52■■□□□ 1.2
LIMS2-218ENST00000582671 LNPKQ9C0E8 428 aa22.52■■□□□ 1.2
LIMS2-218ENST00000582671 EMILIN3Q9NT22 766 aa22.52■■□□□ 1.2
LIMS2-218ENST00000582671 GSG1L2A8MUP6 293 aa22.51■■□□□ 1.19
LIMS2-218ENST00000582671 IRX6P78412 446 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-218ENST00000582671 CTR9Q6PD62 1173 aa22.51■■□□□ 1.19
LIMS2-218ENST00000582671 SEC62Q99442 399 aaKnown RBP22.51■■□□□ 1.19
LIMS2-218ENST00000582671 FSD1Q9BTV5 496 aa22.51■■□□□ 1.19
LIMS2-218ENST00000582671 ASCC2Q9H1I8 757 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-218ENST00000582671 TMOD4Q9NZQ9 345 aa22.51■■□□□ 1.19
LIMS2-218ENST00000582671 PNMA3Q9UL41 463 aa22.51■■□□□ 1.19
LIMS2-218ENST00000582671 GREB1LQ9C091 1923 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-218ENST00000582671 GPAA1O43292 621 aa22.5■■□□□ 1.19
LIMS2-218ENST00000582671 SEPT2Q15019 361 aa22.5■■□□□ 1.19
LIMS2-218ENST00000582671 ACER1Q8TDN7 264 aa22.5■■□□□ 1.19
LIMS2-218ENST00000582671 CABP5Q9NP86 173 aa22.5■■□□□ 1.19
LIMS2-218ENST00000582671 SWAP70Q9UH65 585 aa22.5■■□□□ 1.19
LIMS2-218ENST00000582671 GNRH1P01148 92 aa22.49■■□□□ 1.19
LIMS2-218ENST00000582671 OSBPP22059 807 aa22.49■■□□□ 1.19
LIMS2-218ENST00000582671 HOXA7P31268 230 aaPredicted RBP22.49■■□□□ 1.19
LIMS2-218ENST00000582671 PABPC4Q13310 644 aaKnown RBP eCLIP22.49■■□□□ 1.19
LIMS2-218ENST00000582671 USP17L2Q6R6M4 530 aa22.49■■□□□ 1.19
LIMS2-218ENST00000582671 ANKRD13CQ8N6S4 541 aa22.49■■□□□ 1.19
LIMS2-218ENST00000582671 PLXNB2O15031 1838 aa22.48■■□□□ 1.19
LIMS2-218ENST00000582671 MPHOSPH10O00566 681 aaKnown RBP22.48■■□□□ 1.19
LIMS2-218ENST00000582671 FMNL1O95466 1100 aaPredicted RBP22.48■■□□□ 1.19
LIMS2-218ENST00000582671 AKR1B1P15121 316 aa22.48■■□□□ 1.19
LIMS2-218ENST00000582671 CDK8P49336 464 aa22.48■■□□□ 1.19
LIMS2-218ENST00000582671 ZYXQ15942 572 aaKnown RBP22.48■■□□□ 1.19
LIMS2-218ENST00000582671 ZMYM1Q5SVZ6 1142 aa22.48■■□□□ 1.19
LIMS2-218ENST00000582671 ARMC5Q96C12 935 aa22.48■■□□□ 1.19
LIMS2-218ENST00000582671 DDRGK1Q96HY6 314 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms