RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 GUCY1A2P33402 732 aa13.02□□□□□ -0.32
GGA3-213ENST00000582486 CEBPZQ03701 1054 aaKnown RBP13.02□□□□□ -0.32
GGA3-213ENST00000582486 NBPF11Q86T75 865 aa13.02□□□□□ -0.32
GGA3-213ENST00000582486 ZNF444Q8N0Y2 327 aaPredicted RBP13.02□□□□□ -0.32
GGA3-213ENST00000582486 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.32
GGA3-213ENST00000582486 SUPT20HQ8NEM7 779 aa13.02□□□□□ -0.32
GGA3-213ENST00000582486 TEKT1Q969V4 418 aa13.02□□□□□ -0.32
GGA3-213ENST00000582486 IL17RBQ9NRM6 502 aa13.02□□□□□ -0.32
GGA3-213ENST00000582486 USP40Q9NVE5 1235 aa13.02□□□□□ -0.32
GGA3-213ENST00000582486 CFAP45Q9UL16 551 aa13.02□□□□□ -0.32
GGA3-213ENST00000582486 UTRNP46939 3433 aa13.02□□□□□ -0.32
GGA3-213ENST00000582486 USP17L3A6NCW0 530 aa13.02□□□□□ -0.33
GGA3-213ENST00000582486 USP17L4A6NCW7 530 aa13.02□□□□□ -0.33
GGA3-213ENST00000582486 PPIP5K2O43314 1243 aa13.02□□□□□ -0.33
GGA3-213ENST00000582486 WDHD1O75717 1129 aaPredicted RBP13.02□□□□□ -0.33
GGA3-213ENST00000582486 CRKP46108 304 aa13.02□□□□□ -0.33
GGA3-213ENST00000582486 ZNF445P59923 1031 aa13.02□□□□□ -0.33
GGA3-213ENST00000582486 RCSD1Q6JBY9 416 aa13.02□□□□□ -0.33
GGA3-213ENST00000582486 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.33
GGA3-213ENST00000582486 USP17L1Q7RTZ2 530 aa13.02□□□□□ -0.33
GGA3-213ENST00000582486 FTOQ9C0B1 505 aaKnown RBP eCLIP13.02□□□□□ -0.33
GGA3-213ENST00000582486 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
GGA3-213ENST00000582486 STK36Q9NRP7 1315 aa13.02□□□□□ -0.33
GGA3-213ENST00000582486 KIF28PB7ZC32 967 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 TSPY3P0CV98 308 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 TSPY8P0CW00 308 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 RASA1P20936 1047 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 CDK8P49336 464 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 PPP2R5BQ15173 497 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 CCDC93Q567U6 631 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 KRT40Q6A162 431 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 C16orf86Q6ZW13 317 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 TRIM22Q8IYM9 498 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 DDX4Q9NQI0 724 aaKnown RBP13.01□□□□□ -0.33
GGA3-213ENST00000582486 DDAH1O94760 285 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 NT5C2P49902 561 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 FKBP1AP62942 108 aaKnown RBP13.01□□□□□ -0.33
GGA3-213ENST00000582486 KIF23Q02241 960 aaPredicted RBP13.01□□□□□ -0.33
GGA3-213ENST00000582486 CDC42EP5Q6NZY7 148 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 RGS22Q8NE09 1264 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 SYAP1Q96A49 352 aaPredicted RBP13.01□□□□□ -0.33
GGA3-213ENST00000582486 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 DLEC1Q9Y238 1755 aa13.01□□□□□ -0.33
GGA3-213ENST00000582486 MYH1P12882 1939 aa13□□□□□ -0.33
GGA3-213ENST00000582486 SYCE3A1L190 88 aa13□□□□□ -0.33
GGA3-213ENST00000582486 YDJCA8MPS7 323 aa13□□□□□ -0.33
GGA3-213ENST00000582486 CALM1P0DP23 149 aa13□□□□□ -0.33
GGA3-213ENST00000582486 CALM2P0DP24 149 aa13□□□□□ -0.33
GGA3-213ENST00000582486 CALM3P0DP25 149 aa13□□□□□ -0.33
GGA3-213ENST00000582486 L1TD1Q5T7N2 865 aaKnown RBP13□□□□□ -0.33
GGA3-213ENST00000582486 RTKN2Q8IZC4 609 aa13□□□□□ -0.33
GGA3-213ENST00000582486 WASF1Q92558 559 aa13□□□□□ -0.33
GGA3-213ENST00000582486 ZNF396Q96N95 335 aaPredicted RBP13□□□□□ -0.33
GGA3-213ENST00000582486 ADAMTSL1Q8N6G6 1762 aa13□□□□□ -0.33
GGA3-213ENST00000582486 DDX60LQ5H9U9 1706 aaKnown RBP13□□□□□ -0.33
GGA3-213ENST00000582486 PLEKHA8P1O95397 391 aa13□□□□□ -0.33
GGA3-213ENST00000582486 DEXIO95424 95 aa13□□□□□ -0.33
GGA3-213ENST00000582486 TRIM29Q14134 588 aa13□□□□□ -0.33
GGA3-213ENST00000582486 GRIPAP1Q4V328 841 aa13□□□□□ -0.33
GGA3-213ENST00000582486 ATL3Q6DD88 541 aa13□□□□□ -0.33
GGA3-213ENST00000582486 DGKHQ86XP1 1220 aa13□□□□□ -0.33
GGA3-213ENST00000582486 HOMEZQ8IX15 550 aa13□□□□□ -0.33
GGA3-213ENST00000582486 PGBD1Q96JS3 809 aa13□□□□□ -0.33
GGA3-213ENST00000582486 ZDHHC15Q96MV8 337 aa13□□□□□ -0.33
GGA3-213ENST00000582486 RBM28Q9NW13 759 aaKnown RBP13□□□□□ -0.33
GGA3-213ENST00000582486 ISY1Q9ULR0 285 aaKnown RBP13□□□□□ -0.33
GGA3-213ENST00000582486 XRCC6P12956 609 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■■■■□ 19.8
GGA3-213ENST00000582486 RBM5P52756 815 aaKnown RBP eCLIP12.99□□□□□ -0.335e-10■■■■□ 19.6
GGA3-213ENST00000582486 FUT2Q10981 343 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 BRAPQ7Z569 592 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 MRIQ9BWK5 157 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 RCOR1Q9UKL0 485 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 MYH15Q9Y2K3 1946 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 GOLGA6L4A6NEF3 574 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 NFIAQ12857 509 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
GGA3-213ENST00000582486 ANKS1AQ92625 1134 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 PSMD1Q99460 953 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 RNF26Q9BY78 433 aaPredicted RBP12.99□□□□□ -0.33
GGA3-213ENST00000582486 GRPEL1Q9HAV7 217 aa12.99□□□□□ -0.33
GGA3-213ENST00000582486 ZNF277Q9NRM2 450 aaPredicted RBP12.99□□□□□ -0.33
GGA3-213ENST00000582486 ECM29Q5VYK3 1845 aa12.98□□□□□ -0.33
GGA3-213ENST00000582486 MRE11P49959 708 aa12.98□□□□□ -0.33
GGA3-213ENST00000582486 MYSM1Q5VVJ2 828 aa12.98□□□□□ -0.33
GGA3-213ENST00000582486 PNMA1Q8ND90 353 aa12.98□□□□□ -0.33
GGA3-213ENST00000582486 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
GGA3-213ENST00000582486 STX8Q9UNK0 236 aa12.98□□□□□ -0.33
GGA3-213ENST00000582486 hCG_1642624A0A1W2PR95 340 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 LIG1P18858 919 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 POLD1P28340 1107 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 TGFB2P61812 414 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 HDLBPQ00341 1268 aaKnown RBP12.97□□□□□ -0.33
GGA3-213ENST00000582486 AKAP17AQ02040 695 aaKnown RBP12.97□□□□□ -0.33
GGA3-213ENST00000582486 CCDC178Q5BJE1 867 aa12.97□□□□□ -0.33
GGA3-213ENST00000582486 CCDC183Q5T5S1 534 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms