RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 POLR2DO15514 142 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 IFNAR1P17181 557 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CMA1P23946 247 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 U2AF2P26368 475 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 BARGINQ6ZT62 677 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 RASGRP4Q8TDF6 673 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SERTAD1Q9UHV2 236 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 ERICH2A1L162 156 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 ZPR1O75312 459 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CDKL5O76039 1030 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CDC25AP30304 524 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 TM4SF1P30408 202 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SF3B3Q15393 1217 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CPLX2Q6PUV4 134 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SMYD4Q8IYR2 804 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 ZSCAN10Q96SZ4 725 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CDCA7Q9BWT1 371 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 PCDHA5Q9Y5H7 936 aa12.33□□□□□ -0.44
CDK5RAP3-225ENST00000582482 GOLGA6L6A8MZA4 724 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CCZ1BP86790 482 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CCZ1P86791 482 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 ZNF174Q15697 407 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 IFIT1BQ5T764 474 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 GPKOWQ92917 476 aaPredicted RBP eCLIP12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 AK7Q96M32 723 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CSRNP2Q9H175 543 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 TMX1Q9H3N1 280 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 ANKIB1Q9P2G1 1089 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 KCNH3Q9ULD8 1083 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 HPSEQ9Y251 543 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 MYH6P13533 1939 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 USP17L3A6NCW0 530 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 USP17L4A6NCW7 530 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CTAGE5O15320 804 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SKILP12757 684 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 HIBADHP31937 336 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 AFMP43652 599 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 FMR1Q06787 632 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 TPD52L1Q16890 204 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 RESP18Q5W5W9 173 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 ARMCX5Q6P1M9 558 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 USP17L1Q7RTZ2 530 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SRBD1Q8N5C6 995 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 MYRIPQ8NFW9 859 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SH3RF3Q8TEJ3 882 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 NLRP3Q96P20 1036 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CNNM2Q9H8M5 875 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 DCP1AQ9NPI6 582 aaPredicted RBP12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 USP21Q9UK80 565 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 RREB1Q92766 1687 aa12.32□□□□□ -0.44
CDK5RAP3-225ENST00000582482 TIAM2Q8IVF5 1701 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 FBXO33Q7Z6M2 555 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CNNM3Q8NE01 707 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SMARCC1Q92922 1105 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 FANCLQ9NW38 375 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 MCM9Q9NXL9 1143 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 FBXO2Q9UK22 296 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 BTAF1O14981 1849 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 NLRP12P59046 1061 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 UBE4AQ14139 1066 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 ATL3Q6DD88 541 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 TICAM2Q86XR7 235 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 STAG2Q8N3U4 1231 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 ESR2Q92731 530 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 MED15Q96RN5 788 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 NARFQ9UHQ1 456 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SCN7AQ01118 1682 aa12.31□□□□□ -0.44
CDK5RAP3-225ENST00000582482 DUOX1Q9NRD9 1551 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 GOLGA8HP0CJ92 632 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 TNNT1P13805 278 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 FUT2Q10981 343 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SART3Q15020 963 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 TRIM22Q8IYM9 498 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 DHX58Q96C10 678 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 GNL3LQ9NVN8 582 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 GNAT2P19087 354 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 STX17P56962 302 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CLEC4GQ6UXB4 293 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 KRBA2Q6ZNG9 492 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 LRRN4CLQ8ND94 238 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 RTCBQ9Y3I0 505 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
CDK5RAP3-225ENST00000582482 RPS6KA4O75676 772 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 TROAPQ12815 778 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 NPY5RQ15761 445 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SLC35G1Q2M3R5 365 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 KLHL10Q6JEL2 608 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 SARM1Q6SZW1 724 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 KRI1Q8N9T8 703 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 MXD3Q9BW11 206 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 INTS13Q9NVM9 706 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 PLCD1P51178 756 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 FANCCQ00597 558 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 DZIP1Q86YF9 867 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 CLEC10AQ8IUN9 316 aa12.29□□□□□ -0.44
CDK5RAP3-225ENST00000582482 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms