RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 ZBTB22O15209 634 aa10.62□□□□□ -0.71
PDLIM1P3-201ENST00000582370 IGSF3O75054 1194 aa10.62□□□□□ -0.71
PDLIM1P3-201ENST00000582370 XRCC5P13010 732 aaKnown RBP10.62□□□□□ -0.71
PDLIM1P3-201ENST00000582370 NFIAQ12857 509 aa10.62□□□□□ -0.71
PDLIM1P3-201ENST00000582370 PABPC4Q13310 644 aaKnown RBP eCLIP10.62□□□□□ -0.71
PDLIM1P3-201ENST00000582370 CDC42EP5Q6NZY7 148 aa10.62□□□□□ -0.71
PDLIM1P3-201ENST00000582370 CHD1LQ86WJ1 897 aa10.62□□□□□ -0.71
PDLIM1P3-201ENST00000582370 RHPN1Q8TCX5 695 aa10.62□□□□□ -0.71
PDLIM1P3-201ENST00000582370 FAM198AQ9UFP1 575 aa10.62□□□□□ -0.71
PDLIM1P3-201ENST00000582370 DAGLAQ9Y4D2 1042 aa10.62□□□□□ -0.71
PDLIM1P3-201ENST00000582370 CTNND1O60716 968 aaKnown RBP10.61□□□□□ -0.71
PDLIM1P3-201ENST00000582370 PDE8BO95263 885 aa10.61□□□□□ -0.71
PDLIM1P3-201ENST00000582370 IGHDP01880 384 aa10.61□□□□□ -0.71
PDLIM1P3-201ENST00000582370 CYP2B6P20813 491 aa10.61□□□□□ -0.71
PDLIM1P3-201ENST00000582370 MAP3K12Q12852 859 aa10.61□□□□□ -0.71
PDLIM1P3-201ENST00000582370 PUM3Q15397 648 aaKnown RBP10.61□□□□□ -0.71
PDLIM1P3-201ENST00000582370 TREML2Q5T2D2 321 aa10.61□□□□□ -0.71
PDLIM1P3-201ENST00000582370 LHX8Q68G74 356 aa10.61□□□□□ -0.71
PDLIM1P3-201ENST00000582370 B4GALNT3Q6L9W6 998 aa10.61□□□□□ -0.71
PDLIM1P3-201ENST00000582370 MORF4L1Q9UBU8 362 aa10.61□□□□□ -0.71
PDLIM1P3-201ENST00000582370 ERC2O15083 957 aa10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 IFIT2P09913 472 aaKnown RBP10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 ZKSCAN1P17029 563 aaPredicted RBP10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 MAP3K10Q02779 954 aa10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 CACNB2Q08289 660 aaPredicted RBP10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 SHHQ15465 462 aa10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 METTL24Q5JXM2 366 aa10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 ANKRD45Q5TZF3 282 aa10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 WDR66Q8TBY9 1149 aa10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 NUDT12Q9BQG2 462 aa10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 EXOC6BQ9Y2D4 811 aa10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 ARIH1Q9Y4X5 557 aaPredicted RBP10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 RFX7Q2KHR2 1363 aa10.6□□□□□ -0.71
PDLIM1P3-201ENST00000582370 TTC41PQ6P2S7 1318 aa10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 SYNGAP1Q96PV0 1343 aa10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 ENTPD3O75355 529 aa10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 IFIT1P09914 478 aaKnown RBP10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 SLC5A1P13866 664 aa10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 C9orf50Q5SZB4 431 aa10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 TMED8Q6PL24 325 aaPredicted RBP10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 ATG9AQ7Z3C6 839 aa10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 LPIN2Q92539 896 aa10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 IDI2Q9BXS1 227 aa10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 TBC1D2Q9BYX2 928 aa10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 PUS3Q9BZE2 481 aaKnown RBP10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 SENP6Q9GZR1 1112 aaPredicted RBP10.59□□□□□ -0.71
PDLIM1P3-201ENST00000582370 CCND3P30281 292 aaPredicted RBP10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 DIXDC1Q155Q3 683 aa10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 CCDC158Q5M9N0 1113 aa10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ZFPM1Q8IX07 1006 aa10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 VGLL2Q8N8G2 317 aa10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 USP38Q8NB14 1042 aa10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ATXN2LQ8WWM7 1075 aaKnown RBP10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ZNF512BQ96KM6 892 aaPredicted RBP10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 SIL1Q9H173 461 aa10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ASCC2Q9H1I8 757 aaPredicted RBP10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 OSBPL3Q9H4L5 887 aa10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 USP40Q9NVE5 1235 aa10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 GNL3LQ9NVN8 582 aaKnown RBP10.58□□□□□ -0.72
PDLIM1P3-201ENST00000582370 SEMA3EO15041 775 aa10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 MSCO60682 206 aa10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 RGS2P41220 211 aa10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 RGS3P49796 1198 aa10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 RTP1P59025 263 aa10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ATP2B3Q16720 1220 aa10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 LRRFIP1Q32MZ4 808 aaKnown RBP10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 TNNI3KQ59H18 835 aa10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ZSCAN29Q8IWY8 852 aaPredicted RBP10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 APBA2Q99767 749 aa10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 PA2G4Q9UQ80 394 aaKnown RBP10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 FPGT-TNNI3KV9GXZ4 949 aa10.57□□□□□ -0.72
PDLIM1P3-201ENST00000582370 PLXNA1Q9UIW2 1896 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 DNM1LO00429 736 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 GLRX3O76003 335 aaKnown RBP10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 UQCRFS1P1P0C7P4 283 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 MX1P20591 662 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 PRDX5P30044 214 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 MAPK4P31152 587 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ATN1P54259 1190 aaPredicted RBP10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 HMGCS2P54868 508 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 TFCP2Q12800 502 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 SH3D19Q5HYK7 790 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 GORABQ5T7V8 394 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 SH3BP5LQ7L8J4 393 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 CCDC84Q86UT8 332 aaPredicted RBP10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ZNF280CQ8ND82 737 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ADAMTS19Q8TE59 1207 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 USP6NLQ92738 828 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 UHRF1Q96T88 793 aaPredicted RBP10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 C1QTNF1Q9BXJ1 281 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ECHDC1Q9NTX5 307 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 THEGQ9P2T0 379 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 SALL1Q9NSC2 1324 aa10.56□□□□□ -0.72
PDLIM1P3-201ENST00000582370 MYO9BQ13459 2157 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 A0A1B0GUL7 405 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 TBC1D12O60347 775 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 LDHBP07195 334 aaKnown RBP10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 IRX3P78415 501 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms