RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 SEMA6BQ9H3T3 888 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 PHIPQ8WWQ0 1821 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 RFX7Q2KHR2 1363 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 LOC285556D6RIA3 1793 aa7.82□□□□□ -1.16
TVP23B-210ENST00000582288 GAKO14976 1311 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 TRIM75PA6NK02 468 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 F6X3S4 739 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 TNFRSF10AO00220 468 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 SEMA3EO15041 775 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 MSCO60682 206 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 MAP4K4O95819 1239 aaPredicted RBP7.81□□□□□ -1.16
TVP23B-210ENST00000582288 LDHBP07195 334 aaKnown RBP7.81□□□□□ -1.16
TVP23B-210ENST00000582288 ZEB1P37275 1124 aaPredicted RBP7.81□□□□□ -1.16
TVP23B-210ENST00000582288 RGS3P49796 1198 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 TRIM32Q13049 653 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 LRRC24Q50LG9 513 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 SH3D19Q5HYK7 790 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 TREML2Q5T2D2 321 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 WWC1Q8IX03 1113 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 ZFPM1Q8IX07 1006 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 SLF2Q8IX21 1173 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 ZGPATQ8N5A5 531 aaKnown RBP7.81□□□□□ -1.16
TVP23B-210ENST00000582288 ZNF280CQ8ND82 737 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 LPIN2Q92539 896 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 USP6NLQ92738 828 aa7.81□□□□□ -1.16
TVP23B-210ENST00000582288 OSBPL5Q9H0X9 879 aaPredicted RBP7.81□□□□□ -1.16
TVP23B-210ENST00000582288 PLXNB2O15031 1838 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 MAST2Q6P0Q8 1798 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 ZKSCAN1P17029 563 aaPredicted RBP7.8□□□□□ -1.16
TVP23B-210ENST00000582288 PRDX5P30044 214 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 MAPK4P31152 587 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 HOXA7P31268 230 aaPredicted RBP7.8□□□□□ -1.16
TVP23B-210ENST00000582288 PLA2G5P39877 138 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 CACNB2Q08289 660 aaPredicted RBP7.8□□□□□ -1.16
TVP23B-210ENST00000582288 SPP2Q13103 211 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 DIXDC1Q155Q3 683 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 TJAP1Q5JTD0 557 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 SH3BP5LQ7L8J4 393 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 ZSCAN29Q8IWY8 852 aaPredicted RBP7.8□□□□□ -1.16
TVP23B-210ENST00000582288 GTF3C2Q8WUA4 911 aaPredicted RBP7.8□□□□□ -1.16
TVP23B-210ENST00000582288 FAM161BQ96MY7 647 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 SRCIN1Q9C0H9 1055 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 ASCC2Q9H1I8 757 aaPredicted RBP7.8□□□□□ -1.16
TVP23B-210ENST00000582288 GNL3LQ9NVN8 582 aaKnown RBP7.8□□□□□ -1.16
TVP23B-210ENST00000582288 PRKAG2Q9UGJ0 569 aa7.8□□□□□ -1.16
TVP23B-210ENST00000582288 PDS5AQ29RF7 1337 aaKnown RBP7.79□□□□□ -1.16
TVP23B-210ENST00000582288 DDTLA6NHG4 134 aaPredicted RBP7.79□□□□□ -1.16
TVP23B-210ENST00000582288 DNM1LO00429 736 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 NBPF7P0C2Y1 421 aaPredicted RBP7.79□□□□□ -1.16
TVP23B-210ENST00000582288 SLC5A1P13866 664 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 CYP2B6P20813 491 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 RGS2P41220 211 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 PDE3AQ14432 1141 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 GPRC5AQ8NFJ5 357 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 LPAR1Q92633 364 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 SUCLG2Q96I99 432 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 WDR18Q9BV38 432 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 AS3MTQ9HBK9 375 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 DENND2AQ9ULE3 1009 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 ARIH1Q9Y4X5 557 aaPredicted RBP7.79□□□□□ -1.16
TVP23B-210ENST00000582288 PCDHGA4Q9Y5G9 962 aa7.79□□□□□ -1.16
TVP23B-210ENST00000582288 FANCIQ9NVI1 1328 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 LTBP2Q14767 1821 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 AK9Q5TCS8 1911 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 USP17L5A8MUK1 530 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 FOSL2P15408 326 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 CAP2P40123 477 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 SHHQ15465 462 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 MORN1Q5T089 497 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 WDR63Q8IWG1 891 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 ANKRD44Q8N8A2 993 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 ATXN2LQ8WWM7 1075 aaKnown RBP7.78□□□□□ -1.16
TVP23B-210ENST00000582288 MYLIPQ8WY64 445 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 APBA2Q99767 749 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 SENP6Q9GZR1 1112 aaPredicted RBP7.78□□□□□ -1.16
TVP23B-210ENST00000582288 TTYH1Q9H313 450 aaPredicted RBP7.78□□□□□ -1.16
TVP23B-210ENST00000582288 BICC1Q9H694 974 aaKnown RBP7.78□□□□□ -1.16
TVP23B-210ENST00000582288 PRKRIP1Q9H875 184 aaPredicted RBP7.78□□□□□ -1.16
TVP23B-210ENST00000582288 DOCK3Q8IZD9 2030 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 MYH13Q9UKX3 1938 aa7.78□□□□□ -1.16
TVP23B-210ENST00000582288 C19orf81C9J6K1 198 aa7.77□□□□□ -1.17
TVP23B-210ENST00000582288 EYA2O00167 538 aa7.77□□□□□ -1.17
TVP23B-210ENST00000582288 GLRX3O76003 335 aaKnown RBP7.77□□□□□ -1.17
TVP23B-210ENST00000582288 HOXC6P09630 235 aa7.77□□□□□ -1.17
TVP23B-210ENST00000582288 CCND3P30281 292 aaPredicted RBP7.77□□□□□ -1.17
TVP23B-210ENST00000582288 HMGCS2P54868 508 aa7.77□□□□□ -1.17
TVP23B-210ENST00000582288 BACE1P56817 501 aa7.77□□□□□ -1.17
TVP23B-210ENST00000582288 HERVK_113P62684 666 aa7.77□□□□□ -1.17
TVP23B-210ENST00000582288 IRX3P78415 501 aaPredicted RBP7.77□□□□□ -1.17
TVP23B-210ENST00000582288 LAPTM4AQ15012 233 aa7.77□□□□□ -1.17
TVP23B-210ENST00000582288 C1orf53Q5VUE5 145 aa7.77□□□□□ -1.17
TVP23B-210ENST00000582288 SPTY2D1Q68D10 685 aaPredicted RBP7.77□□□□□ -1.17
TVP23B-210ENST00000582288 FAM122AQ96E09 287 aa7.77□□□□□ -1.17
TVP23B-210ENST00000582288 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.77□□□□□ -1.17
TVP23B-210ENST00000582288 GINM1Q9NU53 330 aa7.77□□□□□ -1.17
TVP23B-210ENST00000582288 DDX20Q9UHI6 824 aaKnown RBP7.77□□□□□ -1.17
TVP23B-210ENST00000582288 HERC5Q9UII4 1024 aaKnown RBP7.77□□□□□ -1.17
TVP23B-210ENST00000582288 CIZ1Q9ULV3 898 aaPredicted RBP7.77□□□□□ -1.17
TVP23B-210ENST00000582288 GPR75-ASB3A0A0A6YYF3 556 aa7.76□□□□□ -1.17
TVP23B-210ENST00000582288 CIAO1O76071 339 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms