RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 MAP4K1Q92918 833 aa23.83■■□□□ 1.41
TOP3A-213ENST00000582230 OPTNQ96CV9 577 aa23.83■■□□□ 1.41
TOP3A-213ENST00000582230 CABP5Q9NP86 173 aa23.83■■□□□ 1.41
TOP3A-213ENST00000582230 WDR33Q9C0J8 1336 aaKnown RBP23.83■■□□□ 1.4
TOP3A-213ENST00000582230 PPATQ06203 517 aa23.82■■□□□ 1.4
TOP3A-213ENST00000582230 NOGQ13253 232 aa23.82■■□□□ 1.4
TOP3A-213ENST00000582230 ABCB5Q2M3G0 1257 aa23.82■■□□□ 1.4
TOP3A-213ENST00000582230 DNAJC5GQ8N7S2 189 aa23.82■■□□□ 1.4
TOP3A-213ENST00000582230 WNK4Q96J92 1243 aa23.82■■□□□ 1.4
TOP3A-213ENST00000582230 TBC1D2Q9BYX2 928 aa23.82■■□□□ 1.4
TOP3A-213ENST00000582230 LSG1Q9H089 658 aaKnown RBP23.82■■□□□ 1.4
TOP3A-213ENST00000582230 ANO2Q9NQ90 1003 aa23.82■■□□□ 1.4
TOP3A-213ENST00000582230 GDF11O95390 407 aa23.81■■□□□ 1.4
TOP3A-213ENST00000582230 PCP11498 1178 aaKnown RBP23.81■■□□□ 1.4
TOP3A-213ENST00000582230 CTDSPL2Q05D32 466 aa23.81■■□□□ 1.4
TOP3A-213ENST00000582230 GRM1Q13255 1194 aa23.81■■□□□ 1.4
TOP3A-213ENST00000582230 STK11IPQ8N1F8 1099 aa23.81■■□□□ 1.4
TOP3A-213ENST00000582230 ZBTB21Q9ULJ3 1066 aa23.81■■□□□ 1.4
TOP3A-213ENST00000582230 GH2P01242 217 aa23.8■■□□□ 1.4
TOP3A-213ENST00000582230 PPIL2Q13356 520 aa23.8■■□□□ 1.4
TOP3A-213ENST00000582230 ZNF444Q8N0Y2 327 aaPredicted RBP23.8■■□□□ 1.4
TOP3A-213ENST00000582230 OTUD5Q96G74 571 aa23.8■■□□□ 1.4
TOP3A-213ENST00000582230 RNF41Q9H4P4 317 aaPredicted RBP23.8■■□□□ 1.4
TOP3A-213ENST00000582230 ZHX2Q9Y6X8 837 aa23.8■■□□□ 1.4
TOP3A-213ENST00000582230 USP17L5A8MUK1 530 aa23.79■■□□□ 1.4
TOP3A-213ENST00000582230 MPHOSPH10O00566 681 aaKnown RBP23.79■■□□□ 1.4
TOP3A-213ENST00000582230 REC8O95072 547 aa23.79■■□□□ 1.4
TOP3A-213ENST00000582230 FGRP09769 529 aa23.79■■□□□ 1.4
TOP3A-213ENST00000582230 RASA1P20936 1047 aa23.79■■□□□ 1.4
TOP3A-213ENST00000582230 MAP2K2P36507 400 aa23.79■■□□□ 1.4
TOP3A-213ENST00000582230 HAND2P61296 217 aa23.79■■□□□ 1.4
TOP3A-213ENST00000582230 JAG1P78504 1218 aa23.79■■□□□ 1.4
TOP3A-213ENST00000582230 TMEM179Q6ZVK1 233 aa23.79■■□□□ 1.4
TOP3A-213ENST00000582230 CNKSR2Q8WXI2 1034 aa23.79■■□□□ 1.4
TOP3A-213ENST00000582230 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.79■■□□□ 1.4
TOP3A-213ENST00000582230 OTOFQ9HC10 1997 aa23.78■■□□□ 1.4
TOP3A-213ENST00000582230 ORC4O43929 436 aa23.78■■□□□ 1.4
TOP3A-213ENST00000582230 AKNAD1Q5T1N1 836 aa23.78■■□□□ 1.4
TOP3A-213ENST00000582230 MFSD6Q6ZSS7 791 aa23.78■■□□□ 1.4
TOP3A-213ENST00000582230 STAG1Q8WVM7 1258 aa23.78■■□□□ 1.4
TOP3A-213ENST00000582230 AS3MTQ9HBK9 375 aa23.78■■□□□ 1.4
TOP3A-213ENST00000582230 RBM8AQ9Y5S9 174 aaKnown RBP23.78■■□□□ 1.4
TOP3A-213ENST00000582230 EIF5BO60841 1220 aaKnown RBP23.77■■□□□ 1.4
TOP3A-213ENST00000582230 PRDM1O75626 825 aa23.77■■□□□ 1.4
TOP3A-213ENST00000582230 AKR1B1P15121 316 aa23.77■■□□□ 1.4
TOP3A-213ENST00000582230 GJA5P36382 358 aa23.77■■□□□ 1.4
TOP3A-213ENST00000582230 NT5C2P49902 561 aa23.77■■□□□ 1.4
TOP3A-213ENST00000582230 REM2Q8IYK8 340 aaPredicted RBP23.77■■□□□ 1.4
TOP3A-213ENST00000582230 NBPF3Q9H094 633 aa23.77■■□□□ 1.4
TOP3A-213ENST00000582230 AFG3L2Q9Y4W6 797 aa23.77■■□□□ 1.4
TOP3A-213ENST00000582230 LAMB1P07942 1786 aa23.77■■□□□ 1.4
TOP3A-213ENST00000582230 MANSC4A6NHS7 340 aaPredicted RBP23.76■■□□□ 1.39
TOP3A-213ENST00000582230 CXCL11O14625 94 aa23.76■■□□□ 1.39
TOP3A-213ENST00000582230 IRF6O14896 467 aa23.76■■□□□ 1.39
TOP3A-213ENST00000582230 GTF2A2P52657 109 aa23.76■■□□□ 1.39
TOP3A-213ENST00000582230 INHBEP58166 350 aa23.76■■□□□ 1.39
TOP3A-213ENST00000582230 MKRN3Q13064 507 aaKnown RBP23.76■■□□□ 1.39
TOP3A-213ENST00000582230 SNAPC2Q13487 334 aa23.76■■□□□ 1.39
TOP3A-213ENST00000582230 RAB3GAP1Q15042 981 aa23.76■■□□□ 1.39
TOP3A-213ENST00000582230 SHROOM1Q2M3G4 852 aaPredicted RBP23.76■■□□□ 1.39
TOP3A-213ENST00000582230 TBC1D10CQ8IV04 446 aa23.76■■□□□ 1.39
TOP3A-213ENST00000582230 WDR18Q9BV38 432 aa23.76■■□□□ 1.39
TOP3A-213ENST00000582230 KCNH4Q9UQ05 1017 aa23.76■■□□□ 1.39
TOP3A-213ENST00000582230 EPB41L2O43491 1005 aaKnown RBP23.75■■□□□ 1.39
TOP3A-213ENST00000582230 AOC2O75106 756 aa23.75■■□□□ 1.39
TOP3A-213ENST00000582230 KIF23Q02241 960 aaPredicted RBP23.75■■□□□ 1.39
TOP3A-213ENST00000582230 ZNF280CQ8ND82 737 aa23.75■■□□□ 1.39
TOP3A-213ENST00000582230 KANSL2Q9H9L4 492 aa23.75■■□□□ 1.39
TOP3A-213ENST00000582230 TOMM22Q9NS69 142 aa23.75■■□□□ 1.39
TOP3A-213ENST00000582230 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.75■■□□□ 1.39
TOP3A-213ENST00000582230 DOCK1Q14185 1865 aa23.75■■□□□ 1.39
TOP3A-213ENST00000582230 CYP21A2P08686 494 aa23.74■■□□□ 1.39
TOP3A-213ENST00000582230 TSPY3P0CV98 308 aa23.74■■□□□ 1.39
TOP3A-213ENST00000582230 TSPY8P0CW00 308 aa23.74■■□□□ 1.39
TOP3A-213ENST00000582230 GUCY1A2P33402 732 aa23.74■■□□□ 1.39
TOP3A-213ENST00000582230 SREBF2Q12772 1141 aa23.74■■□□□ 1.39
TOP3A-213ENST00000582230 SEPT2Q15019 361 aa23.74■■□□□ 1.39
TOP3A-213ENST00000582230 NECTIN1Q15223 517 aa23.74■■□□□ 1.39
TOP3A-213ENST00000582230 INCENPQ9NQS7 918 aa23.74■■□□□ 1.39
TOP3A-213ENST00000582230 TACC3Q9Y6A5 838 aa23.74■■□□□ 1.39
TOP3A-213ENST00000582230 CETPP11597 493 aa23.73■■□□□ 1.39
TOP3A-213ENST00000582230 TFAP4Q01664 338 aa23.73■■□□□ 1.39
TOP3A-213ENST00000582230 SPP2Q13103 211 aa23.73■■□□□ 1.39
TOP3A-213ENST00000582230 RNF20Q5VTR2 975 aa23.73■■□□□ 1.39
TOP3A-213ENST00000582230 CCDC84Q86UT8 332 aaPredicted RBP23.73■■□□□ 1.39
TOP3A-213ENST00000582230 NEDD1Q8NHV4 660 aa23.73■■□□□ 1.39
TOP3A-213ENST00000582230 MS4A4AQ96JQ5 239 aa23.73■■□□□ 1.39
TOP3A-213ENST00000582230 CNNM2Q9H8M5 875 aa23.73■■□□□ 1.39
TOP3A-213ENST00000582230 TRIM75PA6NK02 468 aa23.72■■□□□ 1.39
TOP3A-213ENST00000582230 TSPY2A6NKD2 308 aa23.72■■□□□ 1.39
TOP3A-213ENST00000582230 RANBP6O60518 1105 aaKnown RBP23.72■■□□□ 1.39
TOP3A-213ENST00000582230 RRP12Q5JTH9 1297 aaKnown RBP23.72■■□□□ 1.39
TOP3A-213ENST00000582230 ESR2Q92731 530 aa23.72■■□□□ 1.39
TOP3A-213ENST00000582230 ZIC5Q96T25 663 aa23.72■■□□□ 1.39
TOP3A-213ENST00000582230 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.72■■□□□ 1.39
TOP3A-213ENST00000582230 KRT23Q9C075 422 aa23.72■■□□□ 1.39
TOP3A-213ENST00000582230 PLIN4Q96Q06 1357 aa23.71■■□□□ 1.39
TOP3A-213ENST00000582230 TESPA1A2RU30 521 aaPredicted RBP23.71■■□□□ 1.39
TOP3A-213ENST00000582230 SLC27A2O14975 620 aa23.71■■□□□ 1.39
TOP3A-213ENST00000582230 TM4SF4P48230 202 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms