RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ELP3Q9H9T3 547 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 GSG1L2A8MUP6 293 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 IGF2BP3O00425 579 aaKnown RBP eCLIP14.86□□□□□ -0.03
SRSF1-204ENST00000581979 RGS19P49795 217 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 VGLL4Q14135 290 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 ANKRD1Q15327 319 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 CDC42EP5Q6NZY7 148 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 OPTNQ96CV9 577 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 RIOK1Q9BRS2 568 aaKnown RBP14.86□□□□□ -0.03
SRSF1-204ENST00000581979 R3HDMLQ9H3Y0 253 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 EPB41L4AQ9HCS5 686 aaPredicted RBP14.86□□□□□ -0.03
SRSF1-204ENST00000581979 LIMCH1Q9UPQ0 1083 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 LDHCP07864 332 aa14.85□□□□□ -0.03
SRSF1-204ENST00000581979 PKN2Q16513 984 aaKnown RBP14.85□□□□□ -0.03
SRSF1-204ENST00000581979 FAM151AQ8WW52 585 aa14.85□□□□□ -0.03
SRSF1-204ENST00000581979 MS4A4AQ96JQ5 239 aa14.85□□□□□ -0.03
SRSF1-204ENST00000581979 TCEANC2Q96MN5 208 aa14.85□□□□□ -0.03
SRSF1-204ENST00000581979 NOL10Q9BSC4 688 aaKnown RBP14.85□□□□□ -0.03
SRSF1-204ENST00000581979 AATFQ9NY61 560 aaKnown RBP eCLIP14.85□□□□□ -0.03
SRSF1-204ENST00000581979 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.85□□□□□ -0.03
SRSF1-204ENST00000581979 COL9A3Q14050 684 aaPredicted RBP14.84□□□□□ -0.03
SRSF1-204ENST00000581979 DHX32Q7L7V1 743 aaKnown RBP14.84□□□□□ -0.03
SRSF1-204ENST00000581979 SDR42E1Q8WUS8 393 aa14.84□□□□□ -0.03
SRSF1-204ENST00000581979 ZSCAN31Q96LW9 406 aaPredicted RBP14.84□□□□□ -0.03
SRSF1-204ENST00000581979 LARP6Q9BRS8 491 aaKnown RBP14.84□□□□□ -0.03
SRSF1-204ENST00000581979 ALDH8A1Q9H2A2 487 aaPredicted RBP14.84□□□□□ -0.03
SRSF1-204ENST00000581979 CSADQ9Y600 493 aa14.84□□□□□ -0.03
SRSF1-204ENST00000581979 GAKO14976 1311 aa14.84□□□□□ -0.03
SRSF1-204ENST00000581979 FKTNO75072 461 aa14.83□□□□□ -0.03
SRSF1-204ENST00000581979 FGD1P98174 961 aa14.83□□□□□ -0.03
SRSF1-204ENST00000581979 OTUD7BQ6GQQ9 843 aa14.83□□□□□ -0.03
SRSF1-204ENST00000581979 RALYLQ86SE5 291 aaKnown RBP14.83□□□□□ -0.03
SRSF1-204ENST00000581979 NCOA7Q8NI08 942 aa14.83□□□□□ -0.03
SRSF1-204ENST00000581979 FAM163AQ96GL9 167 aaPredicted RBP14.83□□□□□ -0.03
SRSF1-204ENST00000581979 PTPN18Q99952 460 aa14.83□□□□□ -0.03
SRSF1-204ENST00000581979 CRNKL1Q9BZJ0 848 aaKnown RBP14.83□□□□□ -0.03
SRSF1-204ENST00000581979 CHMP5Q9NZZ3 219 aa14.83□□□□□ -0.03
SRSF1-204ENST00000581979 SPDYE5A6NIY4 337 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 NFIAQ12857 509 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 TRDNQ13061 729 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 CUL4AQ13619 759 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 DCAF15Q66K64 600 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 Q6ZUG5 572 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 SLF2Q8IX21 1173 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 WRNIP1Q96S55 665 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 USP40Q9NVE5 1235 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 FAM198AQ9UFP1 575 aa14.83□□□□□ -0.04
SRSF1-204ENST00000581979 BAZ2AQ9UIF9 1905 aaKnown RBP14.82□□□□□ -0.04
SRSF1-204ENST00000581979 MROH7-TTC4A0A0A0MT08 1334 aa14.82□□□□□ -0.04
SRSF1-204ENST00000581979 BAG3O95817 575 aa14.82□□□□□ -0.04
SRSF1-204ENST00000581979 GTF2A2P52657 109 aa14.82□□□□□ -0.04
SRSF1-204ENST00000581979 SNCAIPQ9Y6H5 919 aa14.82□□□□□ -0.04
SRSF1-204ENST00000581979 DDIT3P35638 169 aa14.81□□□□□ -0.04
SRSF1-204ENST00000581979 TCP10Q12799 353 aa14.81□□□□□ -0.04
SRSF1-204ENST00000581979 TOB2Q14106 344 aaPredicted RBP14.81□□□□□ -0.04
SRSF1-204ENST00000581979 ERO1BQ86YB8 467 aa14.81□□□□□ -0.04
SRSF1-204ENST00000581979 TBC1D10CQ8IV04 446 aa14.81□□□□□ -0.04
SRSF1-204ENST00000581979 BRI3BPQ8WY22 251 aa14.81□□□□□ -0.04
SRSF1-204ENST00000581979 IDI2Q9BXS1 227 aa14.81□□□□□ -0.04
SRSF1-204ENST00000581979 ZNF341Q9BYN7 854 aa14.81□□□□□ -0.04
SRSF1-204ENST00000581979 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
SRSF1-204ENST00000581979 NBPF3Q9H094 633 aa14.81□□□□□ -0.04
SRSF1-204ENST00000581979 CWC22Q9HCG8 908 aaKnown RBP14.81□□□□□ -0.04
SRSF1-204ENST00000581979 SH2B1Q9NRF2 756 aaPredicted RBP14.81□□□□□ -0.04
SRSF1-204ENST00000581979 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
SRSF1-204ENST00000581979 EXOSC10Q01780 885 aaKnown RBP14.8□□□□□ -0.04
SRSF1-204ENST00000581979 CTDSPL2Q05D32 466 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 CRHR2Q13324 411 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 GIMAP6Q6P9H5 292 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 MIGA2Q7L4E1 593 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 ZKSCAN4Q969J2 545 aaPredicted RBP14.8□□□□□ -0.04
SRSF1-204ENST00000581979 OTUD5Q96G74 571 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 INTS4Q96HW7 963 aaKnown RBP14.8□□□□□ -0.04
SRSF1-204ENST00000581979 ZNF112Q9UJU3 913 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 TPCN1Q9ULQ1 816 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 MINDY4BA8MYZ0 360 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 ENTPD3O75355 529 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 LARGE1O95461 756 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 MCM5P33992 734 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 BTDP43251 543 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 PPARAQ07869 468 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 CHST3Q7LGC8 479 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 CERS3Q8IU89 383 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 MB21D2Q8IYB1 491 aaPredicted RBP14.8□□□□□ -0.04
SRSF1-204ENST00000581979 ATP8A2Q9NTI2 1148 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 HPS5Q9UPZ3 1129 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 NAV1Q8NEY1 1877 aa14.8□□□□□ -0.04
SRSF1-204ENST00000581979 CDK5RAP2Q96SN8 1893 aa14.79□□□□□ -0.04
SRSF1-204ENST00000581979 CCL15-CCL14A0A0B4J2E2 113 aa14.79□□□□□ -0.04
SRSF1-204ENST00000581979 USP5P45974 858 aa14.79□□□□□ -0.04
SRSF1-204ENST00000581979 CCL15Q16663 113 aa14.79□□□□□ -0.04
SRSF1-204ENST00000581979 ME3Q16798 604 aa14.79□□□□□ -0.04
SRSF1-204ENST00000581979 AKNAD1Q5T1N1 836 aa14.79□□□□□ -0.04
SRSF1-204ENST00000581979 FBXO46Q6PJ61 603 aaPredicted RBP14.79□□□□□ -0.04
SRSF1-204ENST00000581979 ZFPM1Q8IX07 1006 aa14.79□□□□□ -0.04
SRSF1-204ENST00000581979 SH3RF3Q8TEJ3 882 aaPredicted RBP14.79□□□□□ -0.04
SRSF1-204ENST00000581979 BRF1Q92994 677 aa14.79□□□□□ -0.04
SRSF1-204ENST00000581979 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms