RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 CACNB2Q08289 660 aaPredicted RBP7.59□□□□□ -1.19
CDK12-207ENST00000581963 MTMR2Q13614 643 aa7.59□□□□□ -1.19
CDK12-207ENST00000581963 MVPQ14764 893 aaKnown RBP7.59□□□□□ -1.19
CDK12-207ENST00000581963 SHROOM1Q2M3G4 852 aaPredicted RBP7.59□□□□□ -1.19
CDK12-207ENST00000581963 POTEEQ6S8J3 1075 aa7.59□□□□□ -1.19
CDK12-207ENST00000581963 TEX11Q8IYF3 940 aa7.59□□□□□ -1.19
CDK12-207ENST00000581963 USP6NLQ92738 828 aa7.59□□□□□ -1.19
CDK12-207ENST00000581963 WDR18Q9BV38 432 aa7.59□□□□□ -1.19
CDK12-207ENST00000581963 UBE2OQ9C0C9 1292 aaKnown RBP7.59□□□□□ -1.19
CDK12-207ENST00000581963 AS3MTQ9HBK9 375 aa7.59□□□□□ -1.19
CDK12-207ENST00000581963 HERC5Q9UII4 1024 aaKnown RBP7.59□□□□□ -1.19
CDK12-207ENST00000581963 PLXNA1Q9UIW2 1896 aa7.59□□□□□ -1.19
CDK12-207ENST00000581963 COL11A1P12107 1806 aaPredicted RBP7.59□□□□□ -1.19
CDK12-207ENST00000581963 LDHCP07864 332 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 ARID4AP29374 1257 aaPredicted RBP7.58□□□□□ -1.2
CDK12-207ENST00000581963 CCND3P30281 292 aaPredicted RBP7.58□□□□□ -1.2
CDK12-207ENST00000581963 MCAMP43121 646 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 IRX3P78415 501 aaPredicted RBP7.58□□□□□ -1.2
CDK12-207ENST00000581963 GSTO1P78417 241 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 MTX1Q13505 466 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 CCL14Q16627 93 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 LRRC26Q2I0M4 334 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 Q3C1V9 767 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 LHX8Q68G74 356 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 SPATA5Q8NB90 893 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 SH3RF3Q8TEJ3 882 aaPredicted RBP7.58□□□□□ -1.2
CDK12-207ENST00000581963 SOCS4Q8WXH5 440 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 CDCA7LQ96GN5 454 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 NEUROD6Q96NK8 337 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 NUDT12Q9BQG2 462 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 PORCNQ9H237 461 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 RAI14Q9P0K7 980 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 RBPJLQ9UBG7 517 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 NOB1Q9ULX3 412 aaKnown RBP7.58□□□□□ -1.2
CDK12-207ENST00000581963 AKAP2Q9Y2D5 859 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 NCOR1O75376 2440 aa7.58□□□□□ -1.2
CDK12-207ENST00000581963 SRGAP3O43295 1099 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 GDF11O95390 407 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 ASNSP08243 561 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 ZKSCAN1P17029 563 aaPredicted RBP7.57□□□□□ -1.2
CDK12-207ENST00000581963 MAPK4P31152 587 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 ERVK-9P63128 1117 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 ERVK-24P63145 666 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 MDM2Q00987 491 aaPredicted RBP7.57□□□□□ -1.2
CDK12-207ENST00000581963 MORN1Q5T089 497 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 GPR142Q7Z601 462 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 ADGRA1Q86SQ6 560 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 METTL16Q86W50 562 aaKnown RBP7.57□□□□□ -1.2
CDK12-207ENST00000581963 MAPKAPK5Q8IW41 473 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 TRMT2AQ8IZ69 625 aaKnown RBP7.57□□□□□ -1.2
CDK12-207ENST00000581963 GPRC5AQ8NFJ5 357 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 GUCD1Q96NT3 240 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 APBA2Q99767 749 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 COL25A1Q9BXS0 654 aaPredicted RBP7.57□□□□□ -1.2
CDK12-207ENST00000581963 API5Q9BZZ5 524 aaKnown RBP7.57□□□□□ -1.2
CDK12-207ENST00000581963 AATFQ9NY61 560 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDK12-207ENST00000581963 TMOD4Q9NZQ9 345 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 PI4KBQ9UBF8 816 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 ZBTB21Q9ULJ3 1066 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 MUC3AQ02505 3323 aa7.57□□□□□ -1.2
CDK12-207ENST00000581963 FLT1P17948 1338 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 C19orf81C9J6K1 198 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 USP17L10C9JJH3 530 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 POTEB2H3BUK9 544 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 CNMDO75829 334 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 RGS2P41220 211 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 PDE3AQ14432 1141 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 PLEKHH3Q7Z736 793 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 TRMT44Q8IYL2 757 aaKnown RBP7.56□□□□□ -1.2
CDK12-207ENST00000581963 PAGR1Q9BTK6 254 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 DHX36Q9H2U1 1008 aaKnown RBP7.56□□□□□ -1.2
CDK12-207ENST00000581963 EMILIN3Q9NT22 766 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 FLRT1Q9NZU1 646 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 HDAC5Q9UQL6 1122 aa7.56□□□□□ -1.2
CDK12-207ENST00000581963 BAZ2AQ9UIF9 1905 aaKnown RBP7.56□□□□□ -1.2
CDK12-207ENST00000581963 PNMA6EA0A0J9YXQ4 647 aa7.55□□□□□ -1.2
CDK12-207ENST00000581963 GNAI3P08754 354 aa7.55□□□□□ -1.2
CDK12-207ENST00000581963 PPP4CP60510 307 aa7.55□□□□□ -1.2
CDK12-207ENST00000581963 MAP2K5Q13163 448 aa7.55□□□□□ -1.2
CDK12-207ENST00000581963 GORABQ5T7V8 394 aa7.55□□□□□ -1.2
CDK12-207ENST00000581963 FAM109BQ6ICB4 259 aaPredicted RBP7.55□□□□□ -1.2
CDK12-207ENST00000581963 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDK12-207ENST00000581963 GTF3C2Q8WUA4 911 aaPredicted RBP7.55□□□□□ -1.2
CDK12-207ENST00000581963 TGFBRAP1Q8WUH2 860 aa7.55□□□□□ -1.2
CDK12-207ENST00000581963 SNRKQ9NRH2 765 aa7.55□□□□□ -1.2
CDK12-207ENST00000581963 GINM1Q9NU53 330 aa7.55□□□□□ -1.2
CDK12-207ENST00000581963 LRP2BPQ9P2M1 347 aa7.55□□□□□ -1.2
CDK12-207ENST00000581963 PALD1Q9ULE6 856 aa7.55□□□□□ -1.2
CDK12-207ENST00000581963 MYH7P12883 1935 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 MCM3APO60318 1980 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 BAG3O95817 575 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 CYP2E1P05181 493 aaPredicted RBP7.54□□□□□ -1.2
CDK12-207ENST00000581963 CT47B1P0C2W7 299 aaPredicted RBP7.54□□□□□ -1.2
CDK12-207ENST00000581963 UQCRFS1P1P0C7P4 283 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 PLCG2P16885 1265 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 DYNLL1P63167 89 aaKnown RBP7.54□□□□□ -1.2
CDK12-207ENST00000581963 NAA16Q6N069 864 aaPredicted RBP7.54□□□□□ -1.2
CDK12-207ENST00000581963 USP17L2Q6R6M4 530 aa7.54□□□□□ -1.2
CDK12-207ENST00000581963 FOXP4Q8IVH2 680 aaPredicted RBP7.54□□□□□ -1.2
CDK12-207ENST00000581963 CRACR2BQ8N4Y2 399 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms