RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 PCDHA4Q9UN74 947 aa8.77□□□□□ -1.01
SMCHD1-207ENST00000581711 CAPN6Q9Y6Q1 641 aa8.77□□□□□ -1.01
SMCHD1-207ENST00000581711 MED14OSP0DP75 135 aa8.76□□□□□ -1.01
SMCHD1-207ENST00000581711 CIAPIN1Q6FI81 312 aa8.76□□□□□ -1.01
SMCHD1-207ENST00000581711 LLGL2Q6P1M3 1020 aa8.76□□□□□ -1.01
SMCHD1-207ENST00000581711 ELMO3Q96BJ8 720 aa8.76□□□□□ -1.01
SMCHD1-207ENST00000581711 TCAF2A6NFQ2 919 aa8.75□□□□□ -1.01
SMCHD1-207ENST00000581711 RASIP1Q5U651 963 aa8.75□□□□□ -1.01
SMCHD1-207ENST00000581711 MIPEPQ99797 713 aa8.75□□□□□ -1.01
SMCHD1-207ENST00000581711 FBRSQ9HAH7 460 aa8.75□□□□□ -1.01
SMCHD1-207ENST00000581711 SLAMF8Q9P0V8 285 aa8.75□□□□□ -1.01
SMCHD1-207ENST00000581711 SLBPQ14493 270 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMCHD1-207ENST00000581711 THAP5Q7Z6K1 395 aa8.74□□□□□ -1.01
SMCHD1-207ENST00000581711 ABHD4Q8TB40 342 aa8.74□□□□□ -1.01
SMCHD1-207ENST00000581711 CEP44Q9C0F1 390 aa8.74□□□□□ -1.01
SMCHD1-207ENST00000581711 PRAMEF27A3QJZ7 478 aa8.73□□□□□ -1.01
SMCHD1-207ENST00000581711 ETV2O00321 342 aaPredicted RBP8.73□□□□□ -1.01
SMCHD1-207ENST00000581711 FBXO24O75426 580 aa8.73□□□□□ -1.01
SMCHD1-207ENST00000581711 RAC2P15153 192 aa8.73□□□□□ -1.01
SMCHD1-207ENST00000581711 GLDCP23378 1020 aa8.73□□□□□ -1.01
SMCHD1-207ENST00000581711 LRRC14Q15048 493 aa8.73□□□□□ -1.01
SMCHD1-207ENST00000581711 SCARA3Q6AZY7 606 aa8.73□□□□□ -1.01
SMCHD1-207ENST00000581711 TMC7Q7Z402 723 aa8.73□□□□□ -1.01
SMCHD1-207ENST00000581711 TXNDC2Q86VQ3 553 aa8.73□□□□□ -1.01
SMCHD1-207ENST00000581711 GSTT1P30711 240 aa8.72□□□□□ -1.01
SMCHD1-207ENST00000581711 CTSWP56202 376 aa8.72□□□□□ -1.01
SMCHD1-207ENST00000581711 INPP5AQ14642 412 aa8.72□□□□□ -1.01
SMCHD1-207ENST00000581711 LRFN4Q6PJG9 635 aa8.72□□□□□ -1.01
SMCHD1-207ENST00000581711 TTC6Q86TZ1 520 aa8.72□□□□□ -1.01
SMCHD1-207ENST00000581711 UBE2FQ969M7 185 aa8.72□□□□□ -1.01
SMCHD1-207ENST00000581711 SMG5Q9UPR3 1016 aaKnown RBP8.72□□□□□ -1.01
SMCHD1-207ENST00000581711 PNMA6FA0A0J9YX94 578 aa8.71□□□□□ -1.02
SMCHD1-207ENST00000581711 NKG7Q16617 165 aa8.71□□□□□ -1.02
SMCHD1-207ENST00000581711 MFSD2AQ8NA29 543 aa8.71□□□□□ -1.02
SMCHD1-207ENST00000581711 PPM1HQ9ULR3 514 aa8.71□□□□□ -1.02
SMCHD1-207ENST00000581711 DNAJC25-GNG10A0A024R161 153 aa8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 NUAK1O60285 661 aa8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 CBX7O95931 251 aa8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 CAP2P40123 477 aa8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 LINC00310P59036 64 aa8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 RALGPS1Q5JS13 557 aa8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 ZNF746Q6NUN9 644 aaPredicted RBP8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 LETMD1Q6P1Q0 360 aa8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 RIN3Q8TB24 985 aa8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 SLC26A8Q96RN1 970 aa8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 ZSWIM5Q9P217 1185 aa8.7□□□□□ -1.02
SMCHD1-207ENST00000581711 ERVFC1P60507 584 aa8.69□□□□□ -1.02
SMCHD1-207ENST00000581711 ENOX2Q16206 610 aaKnown RBP8.69□□□□□ -1.02
SMCHD1-207ENST00000581711 MYLIPQ8WY64 445 aa8.69□□□□□ -1.02
SMCHD1-207ENST00000581711 TMEM59LQ9UK28 342 aa8.69□□□□□ -1.02
SMCHD1-207ENST00000581711 CYP8B1Q9UNU6 501 aa8.69□□□□□ -1.02
SMCHD1-207ENST00000581711 KCNN1Q92952 543 aa8.68□□□□□ -1.02
SMCHD1-207ENST00000581711 PLPPR2Q96GM1 343 aa8.68□□□□□ -1.02
SMCHD1-207ENST00000581711 WNT10AQ9GZT5 417 aa8.68□□□□□ -1.02
SMCHD1-207ENST00000581711 RBAK-RBAKDNI3L0D1 243 aa8.67□□□□□ -1.02
SMCHD1-207ENST00000581711 HOXA5P20719 270 aa8.67□□□□□ -1.02
SMCHD1-207ENST00000581711 HK2P52789 917 aa8.67□□□□□ -1.02
SMCHD1-207ENST00000581711 PTPN11Q06124 597 aaPredicted RBP8.67□□□□□ -1.02
SMCHD1-207ENST00000581711 TNK2Q07912 1038 aa8.67□□□□□ -1.02
SMCHD1-207ENST00000581711 DSC3Q14574 896 aa8.67□□□□□ -1.02
SMCHD1-207ENST00000581711 PCNX4Q63HM2 1172 aa8.67□□□□□ -1.02
SMCHD1-207ENST00000581711 HDXQ7Z353 690 aa8.67□□□□□ -1.02
SMCHD1-207ENST00000581711 SRCIN1Q9C0H9 1055 aa8.67□□□□□ -1.02
SMCHD1-207ENST00000581711 HPXP02790 462 aa8.66□□□□□ -1.02
SMCHD1-207ENST00000581711 ESR1P03372 595 aa8.66□□□□□ -1.02
SMCHD1-207ENST00000581711 CELA3AP09093 270 aa8.66□□□□□ -1.02
SMCHD1-207ENST00000581711 SRFP11831 508 aa8.66□□□□□ -1.02
SMCHD1-207ENST00000581711 KIR3DL1P43629 444 aa8.66□□□□□ -1.02
SMCHD1-207ENST00000581711 ETF1P62495 437 aaKnown RBP8.66□□□□□ -1.02
SMCHD1-207ENST00000581711 TMPRSS7Q7RTY8 843 aa8.66□□□□□ -1.02
SMCHD1-207ENST00000581711 COX4I2Q96KJ9 171 aa8.66□□□□□ -1.02
SMCHD1-207ENST00000581711 C20orf173Q96LM9 149 aa8.66□□□□□ -1.02
SMCHD1-207ENST00000581711 PRAMEF13Q5VWM6 474 aa8.65□□□□□ -1.02
SMCHD1-207ENST00000581711 HID1Q8IV36 788 aa8.65□□□□□ -1.02
SMCHD1-207ENST00000581711 ANKRD24Q8TF21 1146 aa8.65□□□□□ -1.02
SMCHD1-207ENST00000581711 IRF2BPLQ9H1B7 796 aa8.65□□□□□ -1.02
SMCHD1-207ENST00000581711 CST3P01034 146 aaPredicted RBP8.64□□□□□ -1.03
SMCHD1-207ENST00000581711 CYP7A1P22680 504 aa8.64□□□□□ -1.03
SMCHD1-207ENST00000581711 PLCB3Q01970 1234 aa8.64□□□□□ -1.03
SMCHD1-207ENST00000581711 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.64□□□□□ -1.03
SMCHD1-207ENST00000581711 XAGE3Q8WTP9 111 aa8.64□□□□□ -1.03
SMCHD1-207ENST00000581711 GAL3ST3Q96A11 431 aa8.64□□□□□ -1.03
SMCHD1-207ENST00000581711 OSBPL7Q9BZF2 842 aa8.64□□□□□ -1.03
SMCHD1-207ENST00000581711 DCTN4Q9UJW0 460 aa8.64□□□□□ -1.03
SMCHD1-207ENST00000581711 TREHO43280 583 aa8.63□□□□□ -1.03
SMCHD1-207ENST00000581711 WIPI1Q5MNZ9 446 aaPredicted RBP8.63□□□□□ -1.03
SMCHD1-207ENST00000581711 RNF32Q9H0A6 362 aa8.63□□□□□ -1.03
SMCHD1-207ENST00000581711 ADAMTS10Q9H324 1103 aa8.63□□□□□ -1.03
SMCHD1-207ENST00000581711 SOWAHDA6NJG2 315 aa8.62□□□□□ -1.03
SMCHD1-207ENST00000581711 TRHRP34981 398 aaPredicted RBP8.62□□□□□ -1.03
SMCHD1-207ENST00000581711 PIWIL2Q8TC59 973 aaKnown RBP8.62□□□□□ -1.03
SMCHD1-207ENST00000581711 PARD6AQ9NPB6 346 aa8.62□□□□□ -1.03
SMCHD1-207ENST00000581711 SNCAIPQ9Y6H5 919 aa8.62□□□□□ -1.03
SMCHD1-207ENST00000581711 WASH4PA8MWX3 477 aa8.61□□□□□ -1.03
SMCHD1-207ENST00000581711 CDK8P49336 464 aa8.61□□□□□ -1.03
SMCHD1-207ENST00000581711 CDH24Q86UP0 819 aa8.61□□□□□ -1.03
SMCHD1-207ENST00000581711 CREG2Q8IUH2 290 aa8.61□□□□□ -1.03
SMCHD1-207ENST00000581711 FBF1Q8TES7 1133 aa8.61□□□□□ -1.03
SMCHD1-207ENST00000581711 RELTQ969Z4 430 aa8.61□□□□□ -1.03
SMCHD1-207ENST00000581711 GRK4P32298 578 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms