RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ANKRD45Q5TZF3 282 aa23.52■■□□□ 1.36
SREBF1-220ENST00000581707 KBTBD3Q8NAB2 608 aa23.52■■□□□ 1.36
SREBF1-220ENST00000581707 ZBTB21Q9ULJ3 1066 aa23.52■■□□□ 1.36
SREBF1-220ENST00000581707 TTC41PQ6P2S7 1318 aa23.52■■□□□ 1.36
SREBF1-220ENST00000581707 DDX60LQ5H9U9 1706 aaKnown RBP23.51■■□□□ 1.35
SREBF1-220ENST00000581707 ERC2O15083 957 aa23.51■■□□□ 1.35
SREBF1-220ENST00000581707 SH3D19Q5HYK7 790 aa23.51■■□□□ 1.35
SREBF1-220ENST00000581707 OTUD7AQ8TE49 926 aaPredicted RBP23.51■■□□□ 1.35
SREBF1-220ENST00000581707 GCC1Q96CN9 775 aa23.51■■□□□ 1.35
SREBF1-220ENST00000581707 ARHGAP39Q9C0H5 1083 aa23.51■■□□□ 1.35
SREBF1-220ENST00000581707 ATP8A2Q9NTI2 1148 aa23.51■■□□□ 1.35
SREBF1-220ENST00000581707 PRKAB2O43741 272 aa23.5■■□□□ 1.35
SREBF1-220ENST00000581707 GH2P01242 217 aa23.5■■□□□ 1.35
SREBF1-220ENST00000581707 RGS19P49795 217 aa23.5■■□□□ 1.35
SREBF1-220ENST00000581707 CERKLQ49MI3 558 aaPredicted RBP23.5■■□□□ 1.35
SREBF1-220ENST00000581707 TREML2Q5T2D2 321 aa23.5■■□□□ 1.35
SREBF1-220ENST00000581707 BACE1P56817 501 aa23.49■■□□□ 1.35
SREBF1-220ENST00000581707 MTMR2Q13614 643 aa23.49■■□□□ 1.35
SREBF1-220ENST00000581707 PUS7LQ9H0K6 701 aaKnown RBP23.49■■□□□ 1.35
SREBF1-220ENST00000581707 LOC285556D6RIA3 1793 aa23.49■■□□□ 1.35
SREBF1-220ENST00000581707 HTTP42858 3142 aa23.49■■□□□ 1.35
SREBF1-220ENST00000581707 ZSWIM8A7E2V4 1837 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 C19orf81C9J6K1 198 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 GLRX3O76003 335 aaKnown RBP23.48■■□□□ 1.35
SREBF1-220ENST00000581707 ECM2O94769 699 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-220ENST00000581707 GNRH1P01148 92 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 BCRP11274 1271 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 MX1P20591 662 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 SHMT1P34896 483 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 SOX10P56693 466 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 GABPAQ06546 454 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 PI4K2BQ8TCG2 481 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 SMCR8Q8TEV9 937 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-220ENST00000581707 TMOD4Q9NZQ9 345 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 PNMA3Q9UL41 463 aa23.48■■□□□ 1.35
SREBF1-220ENST00000581707 SUPT16HQ9Y5B9 1047 aaKnown RBP23.48■■□□□ 1.35
SREBF1-220ENST00000581707 BAZ2AQ9UIF9 1905 aaKnown RBP23.47■■□□□ 1.35
SREBF1-220ENST00000581707 USP17L10C9JJH3 530 aa23.47■■□□□ 1.35
SREBF1-220ENST00000581707 RNF113AO15541 343 aaKnown RBP23.47■■□□□ 1.35
SREBF1-220ENST00000581707 CYP2D6P10635 497 aa23.47■■□□□ 1.35
SREBF1-220ENST00000581707 PSMC4P43686 418 aa23.47■■□□□ 1.35
SREBF1-220ENST00000581707 EVX2Q03828 476 aa23.47■■□□□ 1.35
SREBF1-220ENST00000581707 PABPC4Q13310 644 aaKnown RBP eCLIP23.47■■□□□ 1.35
SREBF1-220ENST00000581707 ABCB5Q2M3G0 1257 aa23.47■■□□□ 1.35
SREBF1-220ENST00000581707 EXOC6Q8TAG9 804 aa23.47■■□□□ 1.35
SREBF1-220ENST00000581707 DDRGK1Q96HY6 314 aa23.47■■□□□ 1.35
SREBF1-220ENST00000581707 SLC4A4Q9Y6R1 1079 aa23.47■■□□□ 1.35
SREBF1-220ENST00000581707 ZFYP08048 801 aaPredicted RBP23.46■■□□□ 1.35
SREBF1-220ENST00000581707 TRIM47Q96LD4 638 aa23.46■■□□□ 1.35
SREBF1-220ENST00000581707 RWDD1Q9H446 243 aaPredicted RBP23.46■■□□□ 1.35
SREBF1-220ENST00000581707 CABP5Q9NP86 173 aa23.46■■□□□ 1.35
SREBF1-220ENST00000581707 FMNL1O95466 1100 aaPredicted RBP23.45■■□□□ 1.34
SREBF1-220ENST00000581707 OSBPP22059 807 aa23.45■■□□□ 1.34
SREBF1-220ENST00000581707 CTGFP29279 349 aa23.45■■□□□ 1.34
SREBF1-220ENST00000581707 RAB3GAP1Q15042 981 aa23.45■■□□□ 1.34
SREBF1-220ENST00000581707 LRRFIP1Q32MZ4 808 aaKnown RBP23.45■■□□□ 1.34
SREBF1-220ENST00000581707 AMOTL1Q8IY63 956 aa23.45■■□□□ 1.34
SREBF1-220ENST00000581707 APPBP2Q92624 585 aa23.45■■□□□ 1.34
SREBF1-220ENST00000581707 STRBPQ96SI9 672 aaKnown RBP23.45■■□□□ 1.34
SREBF1-220ENST00000581707 PTCH2Q9Y6C5 1203 aa23.45■■□□□ 1.34
SREBF1-220ENST00000581707 SALL3Q9BXA9 1300 aa23.44■■□□□ 1.34
SREBF1-220ENST00000581707 USP17L12C9JPN9 530 aa23.44■■□□□ 1.34
SREBF1-220ENST00000581707 USP17L21D6R901 530 aa23.44■■□□□ 1.34
SREBF1-220ENST00000581707 HOXD10P28358 340 aa23.44■■□□□ 1.34
SREBF1-220ENST00000581707 OSBP2Q969R2 916 aa23.44■■□□□ 1.34
SREBF1-220ENST00000581707 ASCC2Q9H1I8 757 aaPredicted RBP23.44■■□□□ 1.34
SREBF1-220ENST00000581707 SWAP70Q9UH65 585 aa23.44■■□□□ 1.34
SREBF1-220ENST00000581707 TAOK2Q9UL54 1235 aa23.44■■□□□ 1.34
SREBF1-220ENST00000581707 PRMT2P55345 433 aa23.43■■□□□ 1.34
SREBF1-220ENST00000581707 MLLT1Q03111 559 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-220ENST00000581707 C12orf60Q5U649 245 aa23.43■■□□□ 1.34
SREBF1-220ENST00000581707 DYNLL2Q96FJ2 89 aa23.43■■□□□ 1.34
SREBF1-220ENST00000581707 CENPFP49454 3210 aa23.43■■□□□ 1.34
SREBF1-220ENST00000581707 MGAMO43451 1857 aa23.43■■□□□ 1.34
SREBF1-220ENST00000581707 CYP2D7A0A087X1C5 515 aa23.42■■□□□ 1.34
SREBF1-220ENST00000581707 HOXA7P31268 230 aaPredicted RBP23.42■■□□□ 1.34
SREBF1-220ENST00000581707 GCLCP48506 637 aaPredicted RBP23.42■■□□□ 1.34
SREBF1-220ENST00000581707 FCGRTP55899 365 aa23.42■■□□□ 1.34
SREBF1-220ENST00000581707 USP17L2Q6R6M4 530 aa23.42■■□□□ 1.34
SREBF1-220ENST00000581707 ANKRD13CQ8N6S4 541 aa23.42■■□□□ 1.34
SREBF1-220ENST00000581707 SLC44A5Q8NCS7 719 aa23.42■■□□□ 1.34
SREBF1-220ENST00000581707 ARMC5Q96C12 935 aa23.42■■□□□ 1.34
SREBF1-220ENST00000581707 EMILIN3Q9NT22 766 aa23.42■■□□□ 1.34
SREBF1-220ENST00000581707 STAP2Q9UGK3 403 aa23.42■■□□□ 1.34
SREBF1-220ENST00000581707 SRRDQ9UH36 339 aa23.42■■□□□ 1.34
SREBF1-220ENST00000581707 MYH8P13535 1937 aa23.41■■□□□ 1.34
SREBF1-220ENST00000581707 MPHOSPH10O00566 681 aaKnown RBP23.41■■□□□ 1.34
SREBF1-220ENST00000581707 IRX3P78415 501 aaPredicted RBP23.41■■□□□ 1.34
SREBF1-220ENST00000581707 SLC9C1Q4G0N8 1177 aa23.41■■□□□ 1.34
SREBF1-220ENST00000581707 NBPF11Q86T75 865 aa23.41■■□□□ 1.34
SREBF1-220ENST00000581707 FEZ1Q99689 392 aa23.41■■□□□ 1.34
SREBF1-220ENST00000581707 FSD1Q9BTV5 496 aa23.41■■□□□ 1.34
SREBF1-220ENST00000581707 IGHDP01880 384 aa23.4■■□□□ 1.34
SREBF1-220ENST00000581707 GUCY1A2P33402 732 aa23.4■■□□□ 1.34
SREBF1-220ENST00000581707 PDE1AP54750 535 aa23.4■■□□□ 1.34
SREBF1-220ENST00000581707 SEPT2Q15019 361 aa23.4■■□□□ 1.34
SREBF1-220ENST00000581707 CTR9Q6PD62 1173 aa23.4■■□□□ 1.34
SREBF1-220ENST00000581707 SMC5Q8IY18 1101 aa23.4■■□□□ 1.34
SREBF1-220ENST00000581707 ACER1Q8TDN7 264 aa23.4■■□□□ 1.34
SREBF1-220ENST00000581707 GSG1L2A8MUP6 293 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms