RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 CAP1Q01518 475 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 RRP1BQ14684 758 aaKnown RBP11.84□□□□□ -0.51
TOP3A-211ENST00000581536 CCL15Q16663 113 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 SLFNL1Q499Z3 407 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 ERO1BQ86YB8 467 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 TEX11Q8IYF3 940 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 FAM43AQ8N2R8 423 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 MAGEB6Q8N7X4 407 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 TGFBRAP1Q8WUH2 860 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 HOOK2Q96ED9 719 aa11.84□□□□□ -0.51
TOP3A-211ENST00000581536 CHMP4BQ9H444 224 aaKnown RBP11.84□□□□□ -0.51
TOP3A-211ENST00000581536 MAST2Q6P0Q8 1798 aa11.83□□□□□ -0.52
TOP3A-211ENST00000581536 GTF2A2P52657 109 aa11.83□□□□□ -0.52
TOP3A-211ENST00000581536 RRP1P56182 461 aaKnown RBP11.83□□□□□ -0.52
TOP3A-211ENST00000581536 PPATQ06203 517 aa11.83□□□□□ -0.52
TOP3A-211ENST00000581536 CRHR2Q13324 411 aa11.83□□□□□ -0.52
TOP3A-211ENST00000581536 CCDC84Q86UT8 332 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-211ENST00000581536 MAPKAPK5Q8IW41 473 aa11.83□□□□□ -0.52
TOP3A-211ENST00000581536 MIGA1Q8NAN2 632 aa11.83□□□□□ -0.52
TOP3A-211ENST00000581536 CRBNQ96SW2 442 aa11.83□□□□□ -0.52
TOP3A-211ENST00000581536 CFHR5Q9BXR6 569 aa11.83□□□□□ -0.52
TOP3A-211ENST00000581536 OSBPL5Q9H0X9 879 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-211ENST00000581536 BOLA2Q9H3K6 86 aa11.83□□□□□ -0.52
TOP3A-211ENST00000581536 PTPRFP10586 1907 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 BTBD19C9JJ37 291 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 FKTNO75072 461 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 BAG3O95817 575 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 ALDH1A1P00352 501 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 CHGBP05060 677 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 FOSBP53539 338 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 PPIL2Q13356 520 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 SLC4A8Q2Y0W8 1093 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 NOL10Q9BSC4 688 aaKnown RBP11.82□□□□□ -0.52
TOP3A-211ENST00000581536 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
TOP3A-211ENST00000581536 SAP30BPQ9UHR5 308 aaKnown RBP11.82□□□□□ -0.52
TOP3A-211ENST00000581536 ZSWIM8A7E2V4 1837 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 DOCK1Q14185 1865 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 GOLIM4O00461 696 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 MAP4K4O95819 1239 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-211ENST00000581536 PTPRAP18433 802 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 JAG1P78504 1218 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 MOGSQ13724 837 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 NOL9Q5SY16 702 aaKnown RBP11.81□□□□□ -0.52
TOP3A-211ENST00000581536 OTUD7BQ6GQQ9 843 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 CTU1Q7Z7A3 348 aaKnown RBP11.81□□□□□ -0.52
TOP3A-211ENST00000581536 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 DNAJC2Q99543 621 aaKnown RBP11.81□□□□□ -0.52
TOP3A-211ENST00000581536 LRRCC1Q9C099 1032 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.81□□□□□ -0.52
TOP3A-211ENST00000581536 PALD1Q9ULE6 856 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 ZHX2Q9Y6X8 837 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 MYH7P12883 1935 aa11.81□□□□□ -0.52
TOP3A-211ENST00000581536 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
TOP3A-211ENST00000581536 CETPP11597 493 aa11.8□□□□□ -0.52
TOP3A-211ENST00000581536 MAP3K12Q12852 859 aa11.8□□□□□ -0.52
TOP3A-211ENST00000581536 SNAPC2Q13487 334 aa11.8□□□□□ -0.52
TOP3A-211ENST00000581536 SHROOM1Q2M3G4 852 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-211ENST00000581536 NOM1Q5C9Z4 860 aaKnown RBP11.8□□□□□ -0.52
TOP3A-211ENST00000581536 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
TOP3A-211ENST00000581536 SCYL3Q8IZE3 742 aa11.8□□□□□ -0.52
TOP3A-211ENST00000581536 ZNF687Q8N1G0 1237 aa11.8□□□□□ -0.52
TOP3A-211ENST00000581536 CD99L2Q8TCZ2 262 aa11.8□□□□□ -0.52
TOP3A-211ENST00000581536 KCNH4Q9UQ05 1017 aa11.8□□□□□ -0.52
TOP3A-211ENST00000581536 AFG3L2Q9Y4W6 797 aa11.8□□□□□ -0.52
TOP3A-211ENST00000581536 BAZ2AQ9UIF9 1905 aaKnown RBP11.8□□□□□ -0.52
TOP3A-211ENST00000581536 TCRBV5S4A2TA0A5A2 114 aa11.79□□□□□ -0.52
TOP3A-211ENST00000581536 TNRC18O15417 2968 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-211ENST00000581536 CTNND1O60716 968 aaKnown RBP11.79□□□□□ -0.52
TOP3A-211ENST00000581536 ATP5JP18859 108 aa11.79□□□□□ -0.52
TOP3A-211ENST00000581536 TAF1CQ15572 869 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-211ENST00000581536 SLC9C2Q5TAH2 1124 aa11.79□□□□□ -0.52
TOP3A-211ENST00000581536 TSHZ3Q63HK5 1081 aa11.79□□□□□ -0.52
TOP3A-211ENST00000581536 GPAT2Q6NUI2 795 aa11.79□□□□□ -0.52
TOP3A-211ENST00000581536 EPAS1Q99814 870 aa11.79□□□□□ -0.52
TOP3A-211ENST00000581536 FLT1P17948 1338 aa11.79□□□□□ -0.52
TOP3A-211ENST00000581536 ZNF532Q9HCE3 1301 aa11.79□□□□□ -0.52
TOP3A-211ENST00000581536 HTTP42858 3142 aa11.79□□□□□ -0.52
TOP3A-211ENST00000581536 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
TOP3A-211ENST00000581536 PDE6AP16499 860 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 USP5P45974 858 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 SP3Q02447 781 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.78□□□□□ -0.52
TOP3A-211ENST00000581536 DDX12PQ92771 950 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 HAUS7Q99871 368 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 RIOK1Q9BRS2 568 aaKnown RBP11.78□□□□□ -0.52
TOP3A-211ENST00000581536 DNAJC18Q9H819 358 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 ZFYVE28Q9HCC9 887 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 PICK1Q9NRD5 415 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 PAG1Q9NWQ8 432 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 PI4KBQ9UBF8 816 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 PCDHGA10Q9Y5H3 936 aa11.78□□□□□ -0.52
TOP3A-211ENST00000581536 MAGEB6P1A0A0J9YX57 407 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 PDHXO00330 501 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 CXCL11O14625 94 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 CAP2P40123 477 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-211ENST00000581536 TYW1BQ6NUM6 668 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 OTOP1Q7RTM1 612 aa11.77□□□□□ -0.53
TOP3A-211ENST00000581536 METTL16Q86W50 562 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms