RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 PLEKHH3Q7Z736 793 aa18.19■□□□□ 0.5
IFT20-211ENST00000580991 GTF3C2Q8WUA4 911 aaPredicted RBP18.19■□□□□ 0.5
IFT20-211ENST00000580991 SYMPKQ92797 1274 aaKnown RBP18.19■□□□□ 0.5
IFT20-211ENST00000580991 PORCNQ9H237 461 aa18.19■□□□□ 0.5
IFT20-211ENST00000580991 SEMA6BQ9H3T3 888 aa18.19■□□□□ 0.5
IFT20-211ENST00000580991 MRS2Q9HD23 443 aa18.19■□□□□ 0.5
IFT20-211ENST00000580991 LDHCP07864 332 aa18.18■□□□□ 0.5
IFT20-211ENST00000580991 GSTO1P78417 241 aa18.18■□□□□ 0.5
IFT20-211ENST00000580991 ZNF384Q8TF68 577 aa18.18■□□□□ 0.5
IFT20-211ENST00000580991 MUC3AQ02505 3323 aa18.18■□□□□ 0.5
IFT20-211ENST00000580991 MSCO60682 206 aa18.17■□□□□ 0.5
IFT20-211ENST00000580991 ATN1P54259 1190 aaPredicted RBP18.17■□□□□ 0.5
IFT20-211ENST00000580991 Q3C1V9 767 aa18.17■□□□□ 0.5
IFT20-211ENST00000580991 MFSD14CQ5VZR4 134 aa18.17■□□□□ 0.5
IFT20-211ENST00000580991 PAGR1Q9BTK6 254 aa18.17■□□□□ 0.5
IFT20-211ENST00000580991 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
IFT20-211ENST00000580991 PI4KBQ9UBF8 816 aa18.17■□□□□ 0.5
IFT20-211ENST00000580991 USP17L10C9JJH3 530 aa18.16■□□□□ 0.5
IFT20-211ENST00000580991 UBTFL1P0CB47 393 aaPredicted RBP18.16■□□□□ 0.5
IFT20-211ENST00000580991 TIMM10P62072 90 aa18.16■□□□□ 0.5
IFT20-211ENST00000580991 MAP2K5Q13163 448 aa18.16■□□□□ 0.5
IFT20-211ENST00000580991 LPAR1Q92633 364 aa18.16■□□□□ 0.5
IFT20-211ENST00000580991 EDC3Q96F86 508 aaKnown RBP18.16■□□□□ 0.5
IFT20-211ENST00000580991 DHX36Q9H2U1 1008 aaKnown RBP18.16■□□□□ 0.5
IFT20-211ENST00000580991 DDX20Q9UHI6 824 aaKnown RBP18.16■□□□□ 0.5
IFT20-211ENST00000580991 LTBP2Q14767 1821 aa18.15■□□□□ 0.5
IFT20-211ENST00000580991 DNM1LO00429 736 aa18.15■□□□□ 0.5
IFT20-211ENST00000580991 GLRX3O76003 335 aaKnown RBP18.15■□□□□ 0.5
IFT20-211ENST00000580991 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
IFT20-211ENST00000580991 SHHQ15465 462 aa18.15■□□□□ 0.5
IFT20-211ENST00000580991 TEX11Q8IYF3 940 aa18.15■□□□□ 0.5
IFT20-211ENST00000580991 NSUN4Q96CB9 384 aaKnown RBP18.15■□□□□ 0.5
IFT20-211ENST00000580991 COPRSQ9NQ92 184 aa18.15■□□□□ 0.5
IFT20-211ENST00000580991 PA2G4Q9UQ80 394 aaKnown RBP18.15■□□□□ 0.5
IFT20-211ENST00000580991 NCOR1O75376 2440 aa18.14■□□□□ 0.5
IFT20-211ENST00000580991 RTP1P59025 263 aa18.14■□□□□ 0.49
IFT20-211ENST00000580991 SMAD3P84022 425 aaKnown RBP18.14■□□□□ 0.49
IFT20-211ENST00000580991 MYLIPQ8WY64 445 aa18.14■□□□□ 0.49
IFT20-211ENST00000580991 XAGE2Q96GT9 111 aa18.14■□□□□ 0.49
IFT20-211ENST00000580991 GINM1Q9NU53 330 aa18.14■□□□□ 0.49
IFT20-211ENST00000580991 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
IFT20-211ENST00000580991 A0A1B0GUL7 405 aa18.13■□□□□ 0.49
IFT20-211ENST00000580991 FOSL2P15408 326 aa18.13■□□□□ 0.49
IFT20-211ENST00000580991 CNGA1P29973 690 aa18.13■□□□□ 0.49
IFT20-211ENST00000580991 CCNA1P78396 465 aa18.13■□□□□ 0.49
IFT20-211ENST00000580991 SSH1Q8WYL5 1049 aa18.13■□□□□ 0.49
IFT20-211ENST00000580991 TTYH1Q9H313 450 aaPredicted RBP18.13■□□□□ 0.49
IFT20-211ENST00000580991 HDAC5Q9UQL6 1122 aa18.13■□□□□ 0.49
IFT20-211ENST00000580991 ATP11BQ9Y2G3 1177 aa18.13■□□□□ 0.49
IFT20-211ENST00000580991 JAG1P78504 1218 aa18.12■□□□□ 0.49
IFT20-211ENST00000580991 C9orf50Q5SZB4 431 aa18.12■□□□□ 0.49
IFT20-211ENST00000580991 POTEEQ6S8J3 1075 aa18.12■□□□□ 0.49
IFT20-211ENST00000580991 SPATA5Q8NB90 893 aa18.12■□□□□ 0.49
IFT20-211ENST00000580991 NOL10Q9BSC4 688 aaKnown RBP18.12■□□□□ 0.49
IFT20-211ENST00000580991 FLRT1Q9NZU1 646 aa18.12■□□□□ 0.49
IFT20-211ENST00000580991 RAI14Q9P0K7 980 aa18.12■□□□□ 0.49
IFT20-211ENST00000580991 HMG20BQ9P0W2 317 aa18.12■□□□□ 0.49
IFT20-211ENST00000580991 RABGAP1Q9Y3P9 1069 aa18.12■□□□□ 0.49
IFT20-211ENST00000580991 SIPA1L1O43166 1804 aa18.12■□□□□ 0.49
IFT20-211ENST00000580991 SLC15A5A6NIM6 579 aa18.11■□□□□ 0.49
IFT20-211ENST00000580991 HOXC6P09630 235 aa18.11■□□□□ 0.49
IFT20-211ENST00000580991 ATP2B2Q01814 1243 aa18.11■□□□□ 0.49
IFT20-211ENST00000580991 TBC1D9Q6ZT07 1266 aa18.11■□□□□ 0.49
IFT20-211ENST00000580991 METTL16Q86W50 562 aaKnown RBP18.11■□□□□ 0.49
IFT20-211ENST00000580991 FOXP4Q8IVH2 680 aaPredicted RBP18.11■□□□□ 0.49
IFT20-211ENST00000580991 CRACR2BQ8N4Y2 399 aaPredicted RBP18.11■□□□□ 0.49
IFT20-211ENST00000580991 SH3RF3Q8TEJ3 882 aaPredicted RBP18.11■□□□□ 0.49
IFT20-211ENST00000580991 TRIM34Q9BYJ4 488 aa18.11■□□□□ 0.49
IFT20-211ENST00000580991 EMILIN3Q9NT22 766 aa18.11■□□□□ 0.49
IFT20-211ENST00000580991 ZBTB21Q9ULJ3 1066 aa18.11■□□□□ 0.49
IFT20-211ENST00000580991 RLFQ13129 1914 aa18.11■□□□□ 0.49
IFT20-211ENST00000580991 GDF11O95390 407 aa18.1■□□□□ 0.49
IFT20-211ENST00000580991 COL9A1P20849 921 aa18.1■□□□□ 0.49
IFT20-211ENST00000580991 PTPREP23469 700 aa18.1■□□□□ 0.49
IFT20-211ENST00000580991 WDR78Q5VTH9 848 aa18.1■□□□□ 0.49
IFT20-211ENST00000580991 USP17L2Q6R6M4 530 aa18.1■□□□□ 0.49
IFT20-211ENST00000580991 PI16Q6UXB8 463 aa18.1■□□□□ 0.49
IFT20-211ENST00000580991 ARRDC4Q8NCT1 418 aa18.1■□□□□ 0.49
IFT20-211ENST00000580991 DNAJC18Q9H819 358 aa18.1■□□□□ 0.49
IFT20-211ENST00000580991 PRDM5Q9NQX1 630 aaPredicted RBP18.1■□□□□ 0.49
IFT20-211ENST00000580991 NDUFB9Q9Y6M9 179 aa18.1■□□□□ 0.49
IFT20-211ENST00000580991 IVNS1ABPQ9Y6Y0 642 aa18.1■□□□□ 0.49
IFT20-211ENST00000580991 TMEM265A0A087WTH1 108 aa18.09■□□□□ 0.49
IFT20-211ENST00000580991 BAG3O95817 575 aa18.09■□□□□ 0.49
IFT20-211ENST00000580991 PLCG2P16885 1265 aa18.09■□□□□ 0.49
IFT20-211ENST00000580991 TFCP2Q12800 502 aa18.09■□□□□ 0.49
IFT20-211ENST00000580991 SLC39A5Q6ZMH5 540 aa18.09■□□□□ 0.49
IFT20-211ENST00000580991 BADQ92934 168 aa18.09■□□□□ 0.49
IFT20-211ENST00000580991 NEUROD6Q96NK8 337 aa18.09■□□□□ 0.49
IFT20-211ENST00000580991 BDP1A6H8Y1 2624 aa18.08■□□□□ 0.49
IFT20-211ENST00000580991 USP17L15C9J2P7 530 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 USP17L13C9JLJ4 530 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 KBTBD13C9JR72 458 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 USP17L11C9JVI0 530 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 USP17L18D6R9N7 530 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 USP17L22D6RA61 530 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 USP17L17D6RBQ6 530 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 USP17L19D6RCP7 530 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 USP17L20D6RJB6 530 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 CNMDO75829 334 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms