RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 COL25A1Q9BXS0 654 aaPredicted RBP23.61■■□□□ 1.37
NDEL1-209ENST00000580738 PORCNQ9H237 461 aa23.61■■□□□ 1.37
NDEL1-209ENST00000580738 PI4KBQ9UBF8 816 aa23.61■■□□□ 1.37
NDEL1-209ENST00000580738 HDAC5Q9UQL6 1122 aa23.61■■□□□ 1.37
NDEL1-209ENST00000580738 LAMA2P24043 3122 aaKnown RBP23.6■■□□□ 1.37
NDEL1-209ENST00000580738 SRGAP3O43295 1099 aa23.6■■□□□ 1.37
NDEL1-209ENST00000580738 POTEEQ6S8J3 1075 aa23.6■■□□□ 1.37
NDEL1-209ENST00000580738 DNAJC18Q9H819 358 aa23.6■■□□□ 1.37
NDEL1-209ENST00000580738 ASNSP08243 561 aa23.59■■□□□ 1.37
NDEL1-209ENST00000580738 MAPK4P31152 587 aa23.59■■□□□ 1.37
NDEL1-209ENST00000580738 PDE3AQ14432 1141 aa23.59■■□□□ 1.37
NDEL1-209ENST00000580738 GORABQ5T7V8 394 aa23.59■■□□□ 1.37
NDEL1-209ENST00000580738 TRMT44Q8IYL2 757 aaKnown RBP23.59■■□□□ 1.37
NDEL1-209ENST00000580738 ARID4AP29374 1257 aaPredicted RBP23.58■■□□□ 1.37
NDEL1-209ENST00000580738 MCAMP43121 646 aa23.58■■□□□ 1.37
NDEL1-209ENST00000580738 ERVK-9P63128 1117 aa23.58■■□□□ 1.37
NDEL1-209ENST00000580738 ERVK-24P63145 666 aa23.58■■□□□ 1.37
NDEL1-209ENST00000580738 MORN1Q5T089 497 aa23.58■■□□□ 1.37
NDEL1-209ENST00000580738 GPR142Q7Z601 462 aa23.58■■□□□ 1.37
NDEL1-209ENST00000580738 DHX36Q9H2U1 1008 aaKnown RBP23.58■■□□□ 1.37
NDEL1-209ENST00000580738 LRP2BPQ9P2M1 347 aa23.58■■□□□ 1.37
NDEL1-209ENST00000580738 C19orf81C9J6K1 198 aa23.57■■□□□ 1.36
NDEL1-209ENST00000580738 USP17L10C9JJH3 530 aa23.57■■□□□ 1.36
NDEL1-209ENST00000580738 GDF11O95390 407 aa23.57■■□□□ 1.36
NDEL1-209ENST00000580738 RGS2P41220 211 aa23.57■■□□□ 1.36
NDEL1-209ENST00000580738 PAGR1Q9BTK6 254 aa23.57■■□□□ 1.36
NDEL1-209ENST00000580738 API5Q9BZZ5 524 aaKnown RBP23.57■■□□□ 1.36
NDEL1-209ENST00000580738 AATFQ9NY61 560 aaKnown RBP eCLIP23.57■■□□□ 1.36
NDEL1-209ENST00000580738 DNAH12Q6ZR08 3092 aa23.57■■□□□ 1.36
NDEL1-209ENST00000580738 POTEB2H3BUK9 544 aa23.56■■□□□ 1.36
NDEL1-209ENST00000580738 PLEKHH3Q7Z736 793 aa23.56■■□□□ 1.36
NDEL1-209ENST00000580738 MAPKAPK5Q8IW41 473 aa23.56■■□□□ 1.36
NDEL1-209ENST00000580738 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.56■■□□□ 1.36
NDEL1-209ENST00000580738 CCAR1Q8IX12 1150 aaKnown RBP23.56■■□□□ 1.36
NDEL1-209ENST00000580738 GUCD1Q96NT3 240 aa23.56■■□□□ 1.36
NDEL1-209ENST00000580738 EMILIN3Q9NT22 766 aa23.56■■□□□ 1.36
NDEL1-209ENST00000580738 SIPA1L1O43166 1804 aa23.56■■□□□ 1.36
NDEL1-209ENST00000580738 MTX1Q13505 466 aa23.55■■□□□ 1.36
NDEL1-209ENST00000580738 METTL16Q86W50 562 aaKnown RBP23.55■■□□□ 1.36
NDEL1-209ENST00000580738 TGFBRAP1Q8WUH2 860 aa23.55■■□□□ 1.36
NDEL1-209ENST00000580738 FAM161BQ96MY7 647 aa23.55■■□□□ 1.36
NDEL1-209ENST00000580738 APBA2Q99767 749 aa23.55■■□□□ 1.36
NDEL1-209ENST00000580738 NOL10Q9BSC4 688 aaKnown RBP23.55■■□□□ 1.36
NDEL1-209ENST00000580738 PALD1Q9ULE6 856 aa23.55■■□□□ 1.36
NDEL1-209ENST00000580738 VCANP13611 3396 aa23.54■■□□□ 1.36
NDEL1-209ENST00000580738 FOXP4Q8IVH2 680 aaPredicted RBP23.54■■□□□ 1.36
NDEL1-209ENST00000580738 CRACR2BQ8N4Y2 399 aaPredicted RBP23.54■■□□□ 1.36
NDEL1-209ENST00000580738 SNRKQ9NRH2 765 aa23.54■■□□□ 1.36
NDEL1-209ENST00000580738 ZBTB21Q9ULJ3 1066 aa23.54■■□□□ 1.36
NDEL1-209ENST00000580738 NDUFB9Q9Y6M9 179 aa23.54■■□□□ 1.36
NDEL1-209ENST00000580738 FAM109BQ6ICB4 259 aaPredicted RBP23.53■■□□□ 1.36
NDEL1-209ENST00000580738 NAA16Q6N069 864 aaPredicted RBP23.53■■□□□ 1.36
NDEL1-209ENST00000580738 ADGRA1Q86SQ6 560 aa23.53■■□□□ 1.36
NDEL1-209ENST00000580738 SENP6Q9GZR1 1112 aaPredicted RBP23.53■■□□□ 1.36
NDEL1-209ENST00000580738 FLRT1Q9NZU1 646 aa23.53■■□□□ 1.36
NDEL1-209ENST00000580738 FLT1P17948 1338 aa23.53■■□□□ 1.36
NDEL1-209ENST00000580738 BAG3O95817 575 aa23.52■■□□□ 1.36
NDEL1-209ENST00000580738 MAP2K5Q13163 448 aa23.52■■□□□ 1.36
NDEL1-209ENST00000580738 TRMT2AQ8IZ69 625 aaKnown RBP23.52■■□□□ 1.36
NDEL1-209ENST00000580738 TRIM34Q9BYJ4 488 aa23.52■■□□□ 1.36
NDEL1-209ENST00000580738 CNMDO75829 334 aa23.51■■□□□ 1.35
NDEL1-209ENST00000580738 GNAI3P08754 354 aa23.51■■□□□ 1.35
NDEL1-209ENST00000580738 PPP4CP60510 307 aa23.51■■□□□ 1.35
NDEL1-209ENST00000580738 GTF3C2Q8WUA4 911 aaPredicted RBP23.51■■□□□ 1.35
NDEL1-209ENST00000580738 EDC3Q96F86 508 aaKnown RBP23.51■■□□□ 1.35
NDEL1-209ENST00000580738 GINM1Q9NU53 330 aa23.51■■□□□ 1.35
NDEL1-209ENST00000580738 SAP30BPQ9UHR5 308 aaKnown RBP23.51■■□□□ 1.35
NDEL1-209ENST00000580738 UQCRFS1P1P0C7P4 283 aa23.5■■□□□ 1.35
NDEL1-209ENST00000580738 PLCG2P16885 1265 aa23.5■■□□□ 1.35
NDEL1-209ENST00000580738 USP17L2Q6R6M4 530 aa23.5■■□□□ 1.35
NDEL1-209ENST00000580738 LBHD1Q9BQE6 289 aaPredicted RBP23.5■■□□□ 1.35
NDEL1-209ENST00000580738 CWC22Q9HCG8 908 aaKnown RBP23.5■■□□□ 1.35
NDEL1-209ENST00000580738 EYSQ5T1H1 3165 aa23.5■■□□□ 1.35
NDEL1-209ENST00000580738 ATN1P54259 1190 aaPredicted RBP23.49■■□□□ 1.35
NDEL1-209ENST00000580738 ZYXQ15942 572 aaKnown RBP23.49■■□□□ 1.35
NDEL1-209ENST00000580738 RABGAP1Q9Y3P9 1069 aa23.49■■□□□ 1.35
NDEL1-209ENST00000580738 PNMA6EA0A0J9YXQ4 647 aa23.48■■□□□ 1.35
NDEL1-209ENST00000580738 GH2P01242 217 aa23.48■■□□□ 1.35
NDEL1-209ENST00000580738 WDR78Q5VTH9 848 aa23.48■■□□□ 1.35
NDEL1-209ENST00000580738 MFSD14CQ5VZR4 134 aa23.48■■□□□ 1.35
NDEL1-209ENST00000580738 CYP2E1P05181 493 aaPredicted RBP23.47■■□□□ 1.35
NDEL1-209ENST00000580738 CT47B1P0C2W7 299 aaPredicted RBP23.47■■□□□ 1.35
NDEL1-209ENST00000580738 CNGA1P29973 690 aa23.47■■□□□ 1.35
NDEL1-209ENST00000580738 G3BP1Q13283 466 aaKnown RBP eCLIP23.47■■□□□ 1.35
NDEL1-209ENST00000580738 DDX20Q9UHI6 824 aaKnown RBP23.47■■□□□ 1.35
NDEL1-209ENST00000580738 SLC15A5A6NIM6 579 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 USP17L15C9J2P7 530 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 USP17L13C9JLJ4 530 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 USP17L11C9JVI0 530 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 USP17L18D6R9N7 530 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 USP17L22D6RA61 530 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 USP17L17D6RBQ6 530 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 USP17L19D6RCP7 530 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 USP17L20D6RJB6 530 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 DYNLL1P63167 89 aaKnown RBP23.46■■□□□ 1.35
NDEL1-209ENST00000580738 USP17L24Q0WX57 530 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 C12orf42Q96LP6 360 aa23.46■■□□□ 1.35
NDEL1-209ENST00000580738 GLRX3O76003 335 aaKnown RBP23.45■■□□□ 1.34
NDEL1-209ENST00000580738 HLA-DOAP06340 250 aa23.45■■□□□ 1.34
NDEL1-209ENST00000580738 PTPREP23469 700 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms