RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	HOOK2	Q96ED9	719 aa		7.78	□□□□□ -1.16
KPNB1-209	ENST00000580158	MRGPRX2	Q96LB1	330 aa		7.78	□□□□□ -1.16
KPNB1-209	ENST00000580158	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.78	□□□□□ -1.16
KPNB1-209	ENST00000580158	LRFN3	Q9BTN0	628 aa		7.78	□□□□□ -1.16
KPNB1-209	ENST00000580158	REPIN1	Q9BWE0	567 aa	Known RBP	7.78	□□□□□ -1.16
KPNB1-209	ENST00000580158	TTYH1	Q9H313	450 aa	Predicted RBP	7.78	□□□□□ -1.16
KPNB1-209	ENST00000580158	THEG	Q9P2T0	379 aa		7.78	□□□□□ -1.16
KPNB1-209	ENST00000580158	PCDHAC2	Q9Y5I4	1007 aa		7.78	□□□□□ -1.16
KPNB1-209	ENST00000580158	DXO	O77932	396 aa	Known RBP	7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	HMGCR	P04035	888 aa		7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	BCR	P11274	1271 aa		7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	LCE2A	Q5TA79	106 aa	Predicted RBP	7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	WRNIP1	Q96S55	665 aa		7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	BSDC1	Q9NW68	430 aa	Predicted RBP	7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	ZNF70	Q9UC06	446 aa	Predicted RBP	7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	TSPYL4	Q9UJ04	414 aa		7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	OGDHL	Q9ULD0	1010 aa		7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	MINPP1	Q9UNW1	487 aa		7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	KCNH4	Q9UQ05	1017 aa		7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	SNCAIP	Q9Y6H5	919 aa		7.77	□□□□□ -1.17
KPNB1-209	ENST00000580158	LAMA2	P24043	3122 aa	Known RBP	7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	TCP10L2	B9ZVM9	353 aa		7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	KCNJ4	P48050	445 aa		7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	FKBP1A	P62942	108 aa	Known RBP	7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	TRIM28	Q13263	835 aa	Known RBP	7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	TMEM31	Q5JXX7	168 aa		7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	TXNRD3	Q86VQ6	643 aa		7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	USP38	Q8NB14	1042 aa		7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	PPM1E	Q8WY54	764 aa		7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	ZKSCAN4	Q969J2	545 aa	Predicted RBP	7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	CD209	Q9NNX6	404 aa		7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	PFAS	O15067	1338 aa		7.76	□□□□□ -1.17
KPNB1-209	ENST00000580158	LTBP2	Q14767	1821 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	MAST2	Q6P0Q8	1798 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158		J3QL48	77 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	CYP2C8	P10632	490 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	SHH	Q15465	462 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	LRRC26	Q2I0M4	334 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	DCAF15	Q66K64	600 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	CERS5	Q8N5B7	392 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	TEPSIN	Q96N21	525 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	GAS2L1	Q99501	681 aa	Predicted RBP	7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	TMEM39B	Q9GZU3	492 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	ANKRD2	Q9GZV1	360 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	TDRD3	Q9H7E2	651 aa	Known RBP	7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	SENP2	Q9HC62	589 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	ATP13A2	Q9NQ11	1180 aa		7.75	□□□□□ -1.17
KPNB1-209	ENST00000580158	IGHMBP2	P38935	993 aa	Known RBP	7.74	□□□□□ -1.17
KPNB1-209	ENST00000580158	MRE11	P49959	708 aa		7.74	□□□□□ -1.17
KPNB1-209	ENST00000580158	CNGB1	Q14028	1251 aa	Predicted RBP	7.74	□□□□□ -1.17
KPNB1-209	ENST00000580158	PDE3A	Q14432	1141 aa		7.74	□□□□□ -1.17
KPNB1-209	ENST00000580158	FASTKD5	Q7L8L6	764 aa	Known RBP	7.74	□□□□□ -1.17
KPNB1-209	ENST00000580158	RIC3	Q7Z5B4	369 aa		7.74	□□□□□ -1.17
KPNB1-209	ENST00000580158	KRI1	Q8N9T8	703 aa	Known RBP	7.74	□□□□□ -1.17
KPNB1-209	ENST00000580158	SMCR8	Q8TEV9	937 aa	Predicted RBP	7.74	□□□□□ -1.17
KPNB1-209	ENST00000580158	PIEZO1	Q92508	2521 aa		7.74	□□□□□ -1.17
KPNB1-209	ENST00000580158	MUC6	Q6W4X9	2439 aa		7.73	□□□□□ -1.17
KPNB1-209	ENST00000580158	FRMPD3	Q5JV73	1810 aa		7.73	□□□□□ -1.17
KPNB1-209	ENST00000580158	HOXA2	O43364	376 aa		7.73	□□□□□ -1.17
KPNB1-209	ENST00000580158	PCCA	P05165	728 aa	Predicted RBP	7.73	□□□□□ -1.17
KPNB1-209	ENST00000580158	COL6A1	P12109	1028 aa		7.73	□□□□□ -1.17
KPNB1-209	ENST00000580158	WNT7B	P56706	349 aa		7.73	□□□□□ -1.17
KPNB1-209	ENST00000580158	GRIN2C	Q14957	1233 aa		7.73	□□□□□ -1.17
KPNB1-209	ENST00000580158	ZNF341	Q9BYN7	854 aa		7.73	□□□□□ -1.17
KPNB1-209	ENST00000580158	SERPINA10	Q9UK55	444 aa		7.73	□□□□□ -1.17
KPNB1-209	ENST00000580158	AOX1	Q06278	1338 aa		7.73	□□□□□ -1.17
KPNB1-209	ENST00000580158	PTPRF	P10586	1907 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	CDH23	Q9H251	3354 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	CXCL11	O14625	94 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	AKNAD1	Q5T1N1	836 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	ERICH6	Q7L0X2	663 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	ZNF804A	Q7Z570	1209 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	DZIP1L	Q8IYY4	767 aa	Known RBP	7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	CCDC191	Q8NCU4	936 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	HPS1	Q92902	700 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	HLA-C	Q95604	372 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	MPHOSPH8	Q99549	860 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	SENP6	Q9GZR1	1112 aa	Predicted RBP	7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	BABAM1	Q9NWV8	329 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	TMOD2	Q9NZR1	351 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	CHPF2	Q9P2E5	772 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	DBF4	Q9UBU7	674 aa	Predicted RBP	7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	TTF2	Q9UNY4	1162 aa	Known RBP	7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	PLXNA1	Q9UIW2	1896 aa		7.72	□□□□□ -1.17
KPNB1-209	ENST00000580158	GPR37L1	O60883	481 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	HSPA5	P11021	654 aa	Known RBP	7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	KLRK1	P26718	216 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	CLCN1	P35523	988 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	CTSW	P56202	376 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	NFX1	Q12986	1120 aa	Known RBP	7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	AAK1	Q2M2I8	961 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	C9orf50	Q5SZB4	431 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	GPAT2	Q6NUI2	795 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	KIFC2	Q96AC6	838 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	ZNF576	Q9H609	170 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	EPHX3	Q9H6B9	360 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	GPCPD1	Q9NPB8	672 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	HYPK	Q9NX55	129 aa		7.71	□□□□□ -1.18
KPNB1-209	ENST00000580158	CWC25	Q9NXE8	425 aa	Predicted RBP	7.71	□□□□□ -1.18

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