RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 IGSF3O75054 1194 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 PRKAR2AP13861 404 aaKnown RBP10.5□□□□□ -0.73
CASC3-206ENST00000579238 TRIM27P14373 513 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 MAPK4P31152 587 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 HERVK_113P62684 666 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 JAG1P78504 1218 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 TTC39AQ5SRH9 613 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 MAPKAPK5Q8IW41 473 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 TRMT44Q8IYL2 757 aaKnown RBP10.5□□□□□ -0.73
CASC3-206ENST00000579238 CRACR2BQ8N4Y2 399 aaPredicted RBP10.5□□□□□ -0.73
CASC3-206ENST00000579238 GTF3C2Q8WUA4 911 aaPredicted RBP10.5□□□□□ -0.73
CASC3-206ENST00000579238 TRIM34Q9BYJ4 488 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 DNAJC18Q9H819 358 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 TXNRD2Q9NNW7 524 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 GPR108Q9NPR9 543 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 FLT1P17948 1338 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 DLL1O00548 723 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 ZKSCAN1P17029 563 aaPredicted RBP10.49□□□□□ -0.73
CASC3-206ENST00000579238 ERVK-9P63128 1117 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 ERVK-24P63145 666 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 PDE3AQ14432 1141 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 TNNI3KQ59H18 835 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 CCDC158Q5M9N0 1113 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 ATF7IPQ6VMQ6 1270 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 USP6NLQ92738 828 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 SNRKQ9NRH2 765 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 RBPJLQ9UBG7 517 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 PALD1Q9ULE6 856 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 ZBTB21Q9ULJ3 1066 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 FPGT-TNNI3KV9GXZ4 949 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 PLXNB2O15031 1838 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 SIPA1L1O43166 1804 aa10.49□□□□□ -0.73
CASC3-206ENST00000579238 COL6A3P12111 3177 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 PEX10O60683 326 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 GDF11O95390 407 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 CYP2E1P05181 493 aaPredicted RBP10.48□□□□□ -0.73
CASC3-206ENST00000579238 HLA-DOAP06340 250 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 SYN1P17600 705 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 RGS2P41220 211 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 MAGEA10P43363 369 aaPredicted RBP10.48□□□□□ -0.73
CASC3-206ENST00000579238 POLA2Q14181 598 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 SHROOM1Q2M3G4 852 aaPredicted RBP10.48□□□□□ -0.73
CASC3-206ENST00000579238 Q3C1V9 767 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 LRIT3Q3SXY7 679 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 MORN1Q5T089 497 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 USP17L2Q6R6M4 530 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 ADGRA1Q86SQ6 560 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 CCAR1Q8IX12 1150 aaKnown RBP10.48□□□□□ -0.73
CASC3-206ENST00000579238 ZNF512BQ96KM6 892 aaPredicted RBP10.48□□□□□ -0.73
CASC3-206ENST00000579238 DBNDD2Q9BQY9 259 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 EMILIN3Q9NT22 766 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 PFASO15067 1338 aa10.48□□□□□ -0.73
CASC3-206ENST00000579238 DDX60LQ5H9U9 1706 aaKnown RBP10.47□□□□□ -0.73
CASC3-206ENST00000579238 MAST2Q6P0Q8 1798 aa10.47□□□□□ -0.73
CASC3-206ENST00000579238 COL6A1P12109 1028 aa10.47□□□□□ -0.73
CASC3-206ENST00000579238 CACNB2Q08289 660 aaPredicted RBP10.47□□□□□ -0.73
CASC3-206ENST00000579238 OS9Q13438 667 aaPredicted RBP10.47□□□□□ -0.73
CASC3-206ENST00000579238 GPR142Q7Z601 462 aa10.47□□□□□ -0.73
CASC3-206ENST00000579238 PLEKHH3Q7Z736 793 aa10.47□□□□□ -0.73
CASC3-206ENST00000579238 CERS3Q8IU89 383 aa10.47□□□□□ -0.73
CASC3-206ENST00000579238 TDHQ8IZJ6 230 aa10.47□□□□□ -0.73
CASC3-206ENST00000579238 FRAT1Q92837 279 aaPredicted RBP10.47□□□□□ -0.73
CASC3-206ENST00000579238 APBA2Q99767 749 aa10.47□□□□□ -0.73
CASC3-206ENST00000579238 PAGR1Q9BTK6 254 aa10.47□□□□□ -0.73
CASC3-206ENST00000579238 PORCNQ9H237 461 aa10.47□□□□□ -0.73
CASC3-206ENST00000579238 SAP30BPQ9UHR5 308 aaKnown RBP10.47□□□□□ -0.73
CASC3-206ENST00000579238 TNNQ9UQP3 1299 aa10.47□□□□□ -0.73
CASC3-206ENST00000579238 BCAR3O75815 825 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 GH2P01242 217 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 CYP7A1P22680 504 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 CCND3P30281 292 aaPredicted RBP10.46□□□□□ -0.73
CASC3-206ENST00000579238 ZAP70P43403 619 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 ATP8B2P98198 1209 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 CCL14Q16627 93 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 LHX8Q68G74 356 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 POTEEQ6S8J3 1075 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 DEFB123Q8N688 67 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 SSH3Q8TE77 659 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 CLUAP1Q96AJ1 413 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 C12orf42Q96LP6 360 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 UBE2OQ9C0C9 1292 aaKnown RBP10.46□□□□□ -0.73
CASC3-206ENST00000579238 CWC22Q9HCG8 908 aaKnown RBP10.46□□□□□ -0.73
CASC3-206ENST00000579238 PIH1D3Q9NQM4 214 aaKnown RBP10.46□□□□□ -0.73
CASC3-206ENST00000579238 RABGAP1Q9Y3P9 1069 aa10.46□□□□□ -0.73
CASC3-206ENST00000579238 FOCADQ5VW36 1801 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 USP17L15C9J2P7 530 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 USP17L13C9JLJ4 530 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 USP17L11C9JVI0 530 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 USP17L18D6R9N7 530 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 USP17L22D6RA61 530 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 USP17L17D6RBQ6 530 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 USP17L19D6RCP7 530 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 USP17L20D6RJB6 530 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 SURF6O75683 361 aaKnown RBP10.45□□□□□ -0.74
CASC3-206ENST00000579238 GLRX3O76003 335 aaKnown RBP10.45□□□□□ -0.74
CASC3-206ENST00000579238 DYNLL1P63167 89 aaKnown RBP10.45□□□□□ -0.74
CASC3-206ENST00000579238 CCNA1P78396 465 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 USP17L24Q0WX57 530 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
CASC3-206ENST00000579238 TATDN1Q6P1N9 297 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms