RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 WBP1LQ9NX94 342 aa28.34■■■□□ 2.13
ERBB2-209ENST00000578709 RAD50Q92878 1312 aa28.34■■■□□ 2.13
ERBB2-209ENST00000578709 PHIPQ8WWQ0 1821 aa28.34■■■□□ 2.13
ERBB2-209ENST00000578709 ASNSP08243 561 aa28.33■■■□□ 2.13
ERBB2-209ENST00000578709 TM4SF4P48230 202 aa28.33■■■□□ 2.13
ERBB2-209ENST00000578709 JAG1P78504 1218 aa28.33■■■□□ 2.13
ERBB2-209ENST00000578709 KCNH4Q9UQ05 1017 aa28.33■■■□□ 2.13
ERBB2-209ENST00000578709 GTF2A2P52657 109 aa28.32■■■□□ 2.12
ERBB2-209ENST00000578709 INHBEP58166 350 aa28.32■■■□□ 2.12
ERBB2-209ENST00000578709 SREBF2Q12772 1141 aa28.32■■■□□ 2.12
ERBB2-209ENST00000578709 CERKLQ49MI3 558 aaPredicted RBP28.32■■■□□ 2.12
ERBB2-209ENST00000578709 SLC44A5Q8NCS7 719 aa28.32■■■□□ 2.12
ERBB2-209ENST00000578709 RUFY2Q8WXA3 655 aa28.32■■■□□ 2.12
ERBB2-209ENST00000578709 IL25Q9H293 177 aa28.32■■■□□ 2.12
ERBB2-209ENST00000578709 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.32■■■□□ 2.12
ERBB2-209ENST00000578709 ZHX2Q9Y6X8 837 aa28.32■■■□□ 2.12
ERBB2-209ENST00000578709 ZMYM6O95789 1325 aa28.32■■■□□ 2.12
ERBB2-209ENST00000578709 MYH8P13535 1937 aa28.31■■■□□ 2.12
ERBB2-209ENST00000578709 TESPA1A2RU30 521 aaPredicted RBP28.31■■■□□ 2.12
ERBB2-209ENST00000578709 MINDY4BA8MYZ0 360 aa28.31■■■□□ 2.12
ERBB2-209ENST00000578709 GDF11O95390 407 aa28.31■■■□□ 2.12
ERBB2-209ENST00000578709 CDK8P49336 464 aa28.31■■■□□ 2.12
ERBB2-209ENST00000578709 TBC1D2Q9BYX2 928 aa28.31■■■□□ 2.12
ERBB2-209ENST00000578709 ZBTB21Q9ULJ3 1066 aa28.31■■■□□ 2.12
ERBB2-209ENST00000578709 AFG3L2Q9Y4W6 797 aa28.31■■■□□ 2.12
ERBB2-209ENST00000578709 SNAPC2Q13487 334 aa28.3■■■□□ 2.12
ERBB2-209ENST00000578709 SHROOM1Q2M3G4 852 aaPredicted RBP28.3■■■□□ 2.12
ERBB2-209ENST00000578709 USP17L5A8MUK1 530 aa28.29■■■□□ 2.12
ERBB2-209ENST00000578709 CXCL11O14625 94 aa28.29■■■□□ 2.12
ERBB2-209ENST00000578709 FGAP02671 866 aa28.29■■■□□ 2.12
ERBB2-209ENST00000578709 PPARAQ07869 468 aa28.29■■■□□ 2.12
ERBB2-209ENST00000578709 ABCB5Q2M3G0 1257 aa28.29■■■□□ 2.12
ERBB2-209ENST00000578709 GH2P01242 217 aa28.28■■■□□ 2.12
ERBB2-209ENST00000578709 CCDC84Q86UT8 332 aaPredicted RBP28.28■■■□□ 2.12
ERBB2-209ENST00000578709 SGSM2O43147 1006 aa28.27■■■□□ 2.12
ERBB2-209ENST00000578709 CETPP11597 493 aa28.27■■■□□ 2.12
ERBB2-209ENST00000578709 BRI3BPQ8WY22 251 aa28.27■■■□□ 2.12
ERBB2-209ENST00000578709 CCDC17Q96LX7 622 aa28.27■■■□□ 2.12
ERBB2-209ENST00000578709 WDR18Q9BV38 432 aa28.27■■■□□ 2.12
ERBB2-209ENST00000578709 DSCC1Q9BVC3 393 aa28.27■■■□□ 2.12
ERBB2-209ENST00000578709 ANAPC4Q9UJX5 808 aa28.27■■■□□ 2.12
ERBB2-209ENST00000578709 PTPRFP10586 1907 aa28.27■■■□□ 2.12
ERBB2-209ENST00000578709 CCL15-CCL14A0A0B4J2E2 113 aa28.26■■■□□ 2.11
ERBB2-209ENST00000578709 CCL15Q16663 113 aa28.26■■■□□ 2.11
ERBB2-209ENST00000578709 IFNL1Q8IU54 200 aa28.26■■■□□ 2.11
ERBB2-209ENST00000578709 ZNF280CQ8ND82 737 aa28.26■■■□□ 2.11
ERBB2-209ENST00000578709 BEGAINQ9BUH8 593 aa28.26■■■□□ 2.11
ERBB2-209ENST00000578709 CABP5Q9NP86 173 aa28.26■■■□□ 2.11
ERBB2-209ENST00000578709 CA12O43570 354 aa28.25■■■□□ 2.11
ERBB2-209ENST00000578709 SLC3A2P08195 630 aaKnown RBP28.25■■■□□ 2.11
ERBB2-209ENST00000578709 HSPA1AP0DMV8 641 aaKnown RBP28.25■■■□□ 2.11
ERBB2-209ENST00000578709 HSPA1BP0DMV9 641 aaKnown RBP28.25■■■□□ 2.11
ERBB2-209ENST00000578709 GUCY1A2P33402 732 aa28.25■■■□□ 2.11
ERBB2-209ENST00000578709 PTPN18Q99952 460 aa28.25■■■□□ 2.11
ERBB2-209ENST00000578709 AS3MTQ9HBK9 375 aa28.25■■■□□ 2.11
ERBB2-209ENST00000578709 ZNF287Q9HBT7 754 aa28.25■■■□□ 2.11
ERBB2-209ENST00000578709 A0A0G2JLL6 359 aaPredicted RBP28.24■■■□□ 2.11
ERBB2-209ENST00000578709 IGF2BP3O00425 579 aaKnown RBP eCLIP28.24■■■□□ 2.11
ERBB2-209ENST00000578709 PRRT2Q7Z6L0 340 aaPredicted RBP28.24■■■□□ 2.11
ERBB2-209ENST00000578709 RNF186Q9NXI6 227 aa28.24■■■□□ 2.11
ERBB2-209ENST00000578709 SAGE1Q9NXZ1 904 aa28.24■■■□□ 2.11
ERBB2-209ENST00000578709 TRIM75PA6NK02 468 aa28.23■■■□□ 2.11
ERBB2-209ENST00000578709 AKR1B1P15121 316 aa28.23■■■□□ 2.11
ERBB2-209ENST00000578709 RASA1P20936 1047 aa28.23■■■□□ 2.11
ERBB2-209ENST00000578709 SPP2Q13103 211 aa28.23■■■□□ 2.11
ERBB2-209ENST00000578709 MOGSQ13724 837 aa28.23■■■□□ 2.11
ERBB2-209ENST00000578709 TMEM179Q6ZVK1 233 aa28.23■■■□□ 2.11
ERBB2-209ENST00000578709 MKNK2Q9HBH9 465 aa28.23■■■□□ 2.11
ERBB2-209ENST00000578709 PDE4BQ07343 736 aa28.22■■■□□ 2.11
ERBB2-209ENST00000578709 STK11IPQ8N1F8 1099 aa28.22■■■□□ 2.11
ERBB2-209ENST00000578709 MPHOSPH10O00566 681 aaKnown RBP28.21■■■□□ 2.11
ERBB2-209ENST00000578709 CDC45O75419 566 aa28.21■■■□□ 2.11
ERBB2-209ENST00000578709 ALDH1A1P00352 501 aa28.21■■■□□ 2.11
ERBB2-209ENST00000578709 CTDSPL2Q05D32 466 aa28.21■■■□□ 2.11
ERBB2-209ENST00000578709 SEPT2Q15019 361 aa28.21■■■□□ 2.11
ERBB2-209ENST00000578709 RAB3GAP1Q15042 981 aa28.21■■■□□ 2.11
ERBB2-209ENST00000578709 OTUD7BQ6GQQ9 843 aa28.21■■■□□ 2.11
ERBB2-209ENST00000578709 ESYT1Q9BSJ8 1104 aa28.21■■■□□ 2.11
ERBB2-209ENST00000578709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.21■■■□□ 2.11
ERBB2-209ENST00000578709 GREB1LQ9C091 1923 aaPredicted RBP28.2■■■□□ 2.11
ERBB2-209ENST00000578709 FGRP09769 529 aa28.2■■■□□ 2.1
ERBB2-209ENST00000578709 FASTKD5Q7L8L6 764 aaKnown RBP28.2■■■□□ 2.1
ERBB2-209ENST00000578709 ZCCHC17Q9NP64 241 aaKnown RBP28.2■■■□□ 2.1
ERBB2-209ENST00000578709 CTNNA3Q9UI47 895 aa28.2■■■□□ 2.1
ERBB2-209ENST00000578709 LAMA4Q16363 1823 aa28.2■■■□□ 2.1
ERBB2-209ENST00000578709 BTBD19C9JJ37 291 aa28.19■■■□□ 2.1
ERBB2-209ENST00000578709 FOXN1O15353 648 aa28.19■■■□□ 2.1
ERBB2-209ENST00000578709 PRDM1O75626 825 aa28.19■■■□□ 2.1
ERBB2-209ENST00000578709 TRPA1O75762 1119 aa28.19■■■□□ 2.1
ERBB2-209ENST00000578709 BACE1P56817 501 aa28.19■■■□□ 2.1
ERBB2-209ENST00000578709 SH3D19Q5HYK7 790 aa28.19■■■□□ 2.1
ERBB2-209ENST00000578709 CFHR5Q9BXR6 569 aa28.19■■■□□ 2.1
ERBB2-209ENST00000578709 TACC3Q9Y6A5 838 aa28.19■■■□□ 2.1
ERBB2-209ENST00000578709 PTH1RQ03431 593 aa28.18■■■□□ 2.1
ERBB2-209ENST00000578709 ANKRD23Q86SG2 305 aa28.18■■■□□ 2.1
ERBB2-209ENST00000578709 ZNF444Q8N0Y2 327 aaPredicted RBP28.18■■■□□ 2.1
ERBB2-209ENST00000578709 FAM43AQ8N2R8 423 aa28.18■■■□□ 2.1
ERBB2-209ENST00000578709 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.18■■■□□ 2.1
ERBB2-209ENST00000578709 NBPF3Q9H094 633 aa28.18■■■□□ 2.1
ERBB2-209ENST00000578709 LOC285556D6RIA3 1793 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms