RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 USP24Q9UPU5 2620 aa9.02□□□□□ -0.96
CDK5RAP3-209ENST00000578663 KMT2EQ8IZD2 1858 aa9.02□□□□□ -0.96
CDK5RAP3-209ENST00000578663 GFRA3O60609 400 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 CTNND1O60716 968 aaKnown RBP9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ENTPD3O75355 529 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 IGFBP4P22692 258 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TCP10Q12799 353 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PABPC4Q13310 644 aaKnown RBP eCLIP9.02□□□□□ -0.972e-7■■■□□ 15.2
CDK5RAP3-209ENST00000578663 CCDC27Q2M243 656 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PRSS33Q8NF86 280 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 SOCS4Q8WXH5 440 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TRIB2Q92519 343 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TSR2Q969E8 191 aaKnown RBP9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 IDI2Q9BXS1 227 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TBC1D2Q9BYX2 928 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PUS3Q9BZE2 481 aaKnown RBP9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TSPYL2Q9H2G4 693 aaPredicted RBP9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 MORF4L1Q9UBU8 362 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 DMXL1Q9Y485 3027 aa9.02□□□□□ -0.97
CDK5RAP3-209ENST00000578663 GVINP1Q7Z2Y8 2422 aa9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ZBTB22O15209 634 aa9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ALDH1L1O75891 902 aa9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PDE8BO95263 885 aa9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PRKAR2AP13861 404 aaKnown RBP9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PBX2P40425 430 aa9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 METTL24Q5JXM2 366 aa9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 LHX8Q68G74 356 aa9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PRKAG2Q9UGJ0 569 aa9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 GPR179Q6PRD1 2367 aa9.01□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TRIM75PA6NK02 468 aa9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 CCER2I3L3R5 266 aa9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 IFIT1P09914 478 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 FGFR2P21802 821 aa9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ATN1P54259 1190 aaPredicted RBP9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 RTP1P59025 263 aa9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PUM3Q15397 648 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 RABL6Q3YEC7 729 aaPredicted RBP9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 C9orf78Q9NZ63 289 aaPredicted RBP9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 LRRFIP2Q9Y608 721 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 SALL1Q9NSC2 1324 aa9□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ZNF292O60281 2723 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 MED19A0JLT2 244 aaPredicted RBP8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 F6X3S4 739 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ZKSCAN1P17029 563 aaPredicted RBP8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 RGS3P49796 1198 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 DIXDC1Q155Q3 683 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 NCBP3Q53F19 620 aaKnown RBP8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TREML2Q5T2D2 321 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 KAZALD1Q96I82 304 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 CNTNAP3BQ96NU0 1288 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 NUDT12Q9BQG2 462 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PBX4Q9BYU1 374 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 CNTNAP3Q9BZ76 1288 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 SENP6Q9GZR1 1112 aaPredicted RBP8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 USP40Q9NVE5 1235 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 UTYO14607 1347 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 GAKO14976 1311 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TECTAO75443 2155 aa8.99□□□□□ -0.97
CDK5RAP3-209ENST00000578663 COL4A6Q14031 1691 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 FAM208BQ5VWN6 2430 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TRIM43BA6NCK2 446 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 GRXCR1A8MXD5 290 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TBC1D12O60347 775 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 NPM3O75607 178 aaKnown RBP8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 LDHBP07195 334 aaKnown RBP8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PRDX5P30044 214 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 LRRC24Q50LG9 513 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 SH3D19Q5HYK7 790 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 SH3BP5LQ7L8J4 393 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ZFPM1Q8IX07 1006 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ZNF280CQ8ND82 737 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 TRIM43Q96BQ3 446 aaPredicted RBP8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 SUCLG2Q96I99 432 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 OSBPL5Q9H0X9 879 aaPredicted RBP8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ASCC2Q9H1I8 757 aaPredicted RBP8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PDLIM7Q9NR12 457 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 VPS13AQ96RL7 3174 aa8.98□□□□□ -0.97
CDK5RAP3-209ENST00000578663 SEMA3EO15041 775 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 MSCO60682 206 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 VAMP4O75379 141 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 SLC5A1P13866 664 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 CYP2B6P20813 491 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 MAPK4P31152 587 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 CACNB2Q08289 660 aaPredicted RBP8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 CSPP1Q1MSJ5 1256 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ZSCAN29Q8IWY8 852 aaPredicted RBP8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 WWC1Q8IX03 1113 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 MICALL1Q8N3F8 863 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 GTF3C2Q8WUA4 911 aaPredicted RBP8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 LPIN2Q92539 896 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 USP6NLQ92738 828 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 APBA2Q99767 749 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 SRCIN1Q9C0H9 1055 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 PRDM5Q9NQX1 630 aaPredicted RBP8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 ATP11BQ9Y2G3 1177 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 FANCIQ9NVI1 1328 aa8.97□□□□□ -0.97
CDK5RAP3-209ENST00000578663 MYH2Q9UKX2 1941 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms