RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 ZNF532Q9HCE3 1301 aa10.31□□□□□ -0.76
PPP4R1-210ENST00000578557 RFX7Q2KHR2 1363 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 TCRBV5S4A2TA0A5A2 114 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 DDTLA6NHG4 134 aaPredicted RBP10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 USP17L5A8MUK1 530 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 SMARCA5O60264 1052 aaPredicted RBP10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 AOC2O75106 756 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 GNRH1P01148 92 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 POLR3DP05423 398 aaPredicted RBP10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 CAP2P40123 477 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 PDE1AP54750 535 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 TATDN1Q6P1N9 297 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 DLK2Q6UY11 383 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 MIGA2Q7L4E1 593 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 WDR18Q9BV38 432 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 ZFYVE28Q9HCC9 887 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 FLT1P17948 1338 aa10.3□□□□□ -0.76
PPP4R1-210ENST00000578557 PATL2C9JE40 543 aaKnown RBP10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 SLC3A2P08195 630 aaKnown RBP10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 PTPRAP18433 802 aa10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 SBK1Q52WX2 424 aa10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 MOB2Q70IA6 237 aa10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 ANKRD23Q86SG2 305 aa10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 PROCA1Q8NCQ7 364 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 PI4K2BQ8TCG2 481 aa10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 GTF3C2Q8WUA4 911 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 ELP3Q9H9T3 547 aa10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 DDX4Q9NQI0 724 aaKnown RBP10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 HELLSQ9NRZ9 838 aa10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 ARPP21Q9UBL0 812 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 SCAF8Q9UPN6 1271 aaKnown RBP10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 SNCAIPQ9Y6H5 919 aa10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 SALL3Q9BXA9 1300 aa10.29□□□□□ -0.76
PPP4R1-210ENST00000578557 FOXN1O15353 648 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 TRPA1O75762 1119 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 NEFLP07196 543 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 CAPN2P17655 700 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 USP14P54578 494 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 SH3BP5LQ7L8J4 393 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 ZFPM1Q8IX07 1006 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 ZKSCAN4Q969J2 545 aaPredicted RBP10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 STRBPQ96SI9 672 aaKnown RBP10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 DCP1AQ9NPI6 582 aaPredicted RBP10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 TSHZ2Q9NRE2 1034 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 MCM9Q9NXL9 1143 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 PNMA3Q9UL41 463 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 AFG3L2Q9Y4W6 797 aa10.28□□□□□ -0.76
PPP4R1-210ENST00000578557 CCL15-CCL14A0A0B4J2E2 113 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 IRF6O14896 467 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 SNPHO15079 494 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 IGHDP01880 384 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 HSPA8P11142 646 aaKnown RBP10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 PCP11498 1178 aaKnown RBP10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 PRMT2P55345 433 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 FOXK1P85037 733 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 KIF22Q14807 665 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 CCL15Q16663 113 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 CERKLQ49MI3 558 aaPredicted RBP10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 ADGRA1Q86SQ6 560 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 MAPKAPK5Q8IW41 473 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 MIGA1Q8NAN2 632 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 ZNF280CQ8ND82 737 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 CLMNQ96JQ2 1002 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 FSD1Q9BTV5 496 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 SH2D4AQ9H788 454 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 SYNPO2Q9UMS6 1093 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 SLC4A4Q9Y6R1 1079 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 ZHX2Q9Y6X8 837 aa10.27□□□□□ -0.77
PPP4R1-210ENST00000578557 CEP350Q5VT06 3117 aa10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 A0A0G2JLL6 359 aaPredicted RBP10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 FKTNO75072 461 aa10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 INPP5BP32019 993 aa10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 LBX1P52954 281 aa10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 DYNLL1P63167 89 aaKnown RBP10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 ALX1Q15699 326 aa10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 C12orf60Q5U649 245 aa10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 CENPQQ7L2Z9 268 aaPredicted RBP10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 PRRT2Q7Z6L0 340 aaPredicted RBP10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 ERO1AQ96HE7 468 aa10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 PARK7Q99497 189 aaKnown RBP10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 PALD1Q9ULE6 856 aa10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 ARAP2Q8WZ64 1704 aa10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 SPEF2Q9C093 1822 aa10.26□□□□□ -0.77
PPP4R1-210ENST00000578557 USP17L10C9JJH3 530 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 GPR25O00155 361 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 TLR2O60603 784 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 MBD4O95243 580 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 HOXD10P28358 340 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 GABPAQ06546 454 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 PDE4BQ07343 736 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 MCMDC2Q4G0Z9 681 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 ZMYM1Q5SVZ6 1142 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 TMEM179Q6ZVK1 233 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 PLEKHM2Q8IWE5 1019 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 RUFY2Q8WXA3 655 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 LARP6Q9BRS8 491 aaKnown RBP10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 LNPKQ9C0E8 428 aa10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 PUS7LQ9H0K6 701 aaKnown RBP10.25□□□□□ -0.77
PPP4R1-210ENST00000578557 TMOD4Q9NZQ9 345 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms