RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 H3BQV1 296 aa19.81■□□□□ 0.76
SREBF1-218ENST00000578469 CDKL5O76039 1030 aa19.81■□□□□ 0.76
SREBF1-218ENST00000578469 CELF2O95319 508 aaKnown RBP19.81■□□□□ 0.76
SREBF1-218ENST00000578469 METAP2P50579 478 aaKnown RBP eCLIP19.81■□□□□ 0.762e-6■□□□□ 9
SREBF1-218ENST00000578469 MLLT1Q03111 559 aaPredicted RBP19.81■□□□□ 0.76
SREBF1-218ENST00000578469 KIAA2012Q0VF49 1180 aa19.81■□□□□ 0.76
SREBF1-218ENST00000578469 STRIP1Q5VSL9 837 aa19.81■□□□□ 0.76
SREBF1-218ENST00000578469 CST9Q5W186 159 aa19.81■□□□□ 0.76
SREBF1-218ENST00000578469 IQCA1Q86XH1 822 aa19.81■□□□□ 0.76
SREBF1-218ENST00000578469 TGFBRAP1Q8WUH2 860 aa19.81■□□□□ 0.76
SREBF1-218ENST00000578469 DDX11Q96FC9 970 aa19.81■□□□□ 0.76
SREBF1-218ENST00000578469 NCOA5Q9HCD5 579 aaKnown RBP19.81■□□□□ 0.76
SREBF1-218ENST00000578469 TTF2Q9UNY4 1162 aaKnown RBP19.81■□□□□ 0.76
SREBF1-218ENST00000578469 HPS5Q9UPZ3 1129 aa19.81■□□□□ 0.76
SREBF1-218ENST00000578469 ECE2O60344 883 aa19.8■□□□□ 0.76
SREBF1-218ENST00000578469 RANBP6O60518 1105 aaKnown RBP19.8■□□□□ 0.76
SREBF1-218ENST00000578469 CTDNEP1O95476 244 aa19.8■□□□□ 0.76
SREBF1-218ENST00000578469 POLR3DP05423 398 aaPredicted RBP19.8■□□□□ 0.76
SREBF1-218ENST00000578469 C12orf60Q5U649 245 aa19.8■□□□□ 0.76
SREBF1-218ENST00000578469 APOA5Q6Q788 366 aa19.8■□□□□ 0.76
SREBF1-218ENST00000578469 HHIPL1Q96JK4 782 aa19.8■□□□□ 0.76
SREBF1-218ENST00000578469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.8■□□□□ 0.76
SREBF1-218ENST00000578469 F8W031 263 aaPredicted RBP19.79■□□□□ 0.76
SREBF1-218ENST00000578469 SLC34A2O95436 690 aa19.79■□□□□ 0.76
SREBF1-218ENST00000578469 USP17L8P0C7I0 530 aa19.79■□□□□ 0.76
SREBF1-218ENST00000578469 CIAPIN1Q6FI81 312 aa19.79■□□□□ 0.76
SREBF1-218ENST00000578469 HHIPL2Q6UWX4 724 aa19.79■□□□□ 0.76
SREBF1-218ENST00000578469 SAPCD2Q86UD0 394 aa19.79■□□□□ 0.76
SREBF1-218ENST00000578469 CERS5Q8N5B7 392 aa19.79■□□□□ 0.76
SREBF1-218ENST00000578469 NKX2-3Q8TAU0 364 aa19.79■□□□□ 0.76
SREBF1-218ENST00000578469 TEKT1Q969V4 418 aa19.79■□□□□ 0.76
SREBF1-218ENST00000578469 ZNF287Q9HBT7 754 aa19.79■□□□□ 0.76
SREBF1-218ENST00000578469 DAGLAQ9Y4D2 1042 aa19.79■□□□□ 0.76
SREBF1-218ENST00000578469 BAZ2AQ9UIF9 1905 aaKnown RBP19.78■□□□□ 0.76
SREBF1-218ENST00000578469 USP17L3A6NCW0 530 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 USP17L4A6NCW7 530 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 GOLGA8AA7E2F4 631 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 AOC2O75106 756 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 CYP2D6P10635 497 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 GMPSP49915 693 aaPredicted RBP19.78■□□□□ 0.76
SREBF1-218ENST00000578469 RCAN1P53805 252 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 CXCL9Q07325 125 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 TNIP1Q15025 636 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 CSPP1Q1MSJ5 1256 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 USP17L1Q7RTZ2 530 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 MAPKAPK5Q8IW41 473 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 ZSCAN10Q96SZ4 725 aaPredicted RBP19.78■□□□□ 0.76
SREBF1-218ENST00000578469 ZKSCAN3Q9BRR0 538 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 TSKSQ9UJT2 592 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 LAMB1P07942 1786 aa19.78■□□□□ 0.76
SREBF1-218ENST00000578469 DTNBO60941 627 aa19.77■□□□□ 0.76
SREBF1-218ENST00000578469 RHBDL3P58872 404 aa19.77■□□□□ 0.76
SREBF1-218ENST00000578469 CCDC178Q5BJE1 867 aa19.77■□□□□ 0.76
SREBF1-218ENST00000578469 MICU3Q86XE3 530 aa19.77■□□□□ 0.76
SREBF1-218ENST00000578469 ZC3H15Q8WU90 426 aaKnown RBP19.77■□□□□ 0.76
SREBF1-218ENST00000578469 MRIQ9BWK5 157 aa19.77■□□□□ 0.76
SREBF1-218ENST00000578469 ZNF408Q9H9D4 720 aa19.77■□□□□ 0.76
SREBF1-218ENST00000578469 TNKSO95271 1327 aa19.76■□□□□ 0.75
SREBF1-218ENST00000578469 ROBO3Q96MS0 1386 aa19.76■□□□□ 0.75
SREBF1-218ENST00000578469 CCDC196A0A1B0GTZ2 297 aa19.76■□□□□ 0.75
SREBF1-218ENST00000578469 PRPF40AO75400 957 aaKnown RBP19.76■□□□□ 0.75
SREBF1-218ENST00000578469 PRDM1O75626 825 aa19.76■□□□□ 0.75
SREBF1-218ENST00000578469 HDLBPQ00341 1268 aaKnown RBP19.76■□□□□ 0.75
SREBF1-218ENST00000578469 DACT2Q5SW24 774 aa19.76■□□□□ 0.75
SREBF1-218ENST00000578469 GLIS2Q9BZE0 524 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-218ENST00000578469 MKNK2Q9HBH9 465 aa19.76■□□□□ 0.75
SREBF1-218ENST00000578469 LMBRD1Q9NUN5 540 aa19.76■□□□□ 0.75
SREBF1-218ENST00000578469 NID2Q14112 1375 aa19.75■□□□□ 0.75
SREBF1-218ENST00000578469 NCLP19338 710 aaKnown RBP19.75■□□□□ 0.75
SREBF1-218ENST00000578469 PPP2R5BQ15173 497 aa19.75■□□□□ 0.75
SREBF1-218ENST00000578469 SEC23AQ15436 765 aa19.75■□□□□ 0.75
SREBF1-218ENST00000578469 IFIT1BQ5T764 474 aaKnown RBP19.75■□□□□ 0.75
SREBF1-218ENST00000578469 CDC37L1Q7L3B6 337 aa19.75■□□□□ 0.75
SREBF1-218ENST00000578469 RAB11FIP4Q86YS3 637 aa19.75■□□□□ 0.75
SREBF1-218ENST00000578469 MXD3Q9BW11 206 aa19.75■□□□□ 0.75
SREBF1-218ENST00000578469 ZSCAN16Q9H4T2 348 aaPredicted RBP19.75■□□□□ 0.75
SREBF1-218ENST00000578469 SENP2Q9HC62 589 aa19.75■□□□□ 0.75
SREBF1-218ENST00000578469 ORC3Q9UBD5 711 aaPredicted RBP19.75■□□□□ 0.75
SREBF1-218ENST00000578469 SAP30BPQ9UHR5 308 aaKnown RBP19.75■□□□□ 0.75
SREBF1-218ENST00000578469 DDX49Q9Y6V7 483 aaKnown RBP19.75■□□□□ 0.75
SREBF1-218ENST00000578469 NAV1Q8NEY1 1877 aa19.75■□□□□ 0.75
SREBF1-218ENST00000578469 FLT1P17948 1338 aa19.75■□□□□ 0.75
SREBF1-218ENST00000578469 TSPY2A6NKD2 308 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 SMIM22K7EJ46 135 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 RAD17O75943 681 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 CALM1P0DP23 149 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 CALM2P0DP24 149 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 CALM3P0DP25 149 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 RTN1Q16799 776 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 FOXD4L6Q3SYB3 417 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-218ENST00000578469 FOXD4L3Q6VB84 417 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-218ENST00000578469 CATIPQ7Z7H3 387 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 ZNF654Q8IZM8 581 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 ZNF444Q8N0Y2 327 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-218ENST00000578469 RGS22Q8NE09 1264 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 USP40Q9NVE5 1235 aa19.74■□□□□ 0.75
SREBF1-218ENST00000578469 H7C1D1 291 aa19.73■□□□□ 0.75
SREBF1-218ENST00000578469 CRKP46108 304 aa19.73■□□□□ 0.75
SREBF1-218ENST00000578469 RGS19P49795 217 aa19.73■□□□□ 0.75
SREBF1-218ENST00000578469 NOGQ13253 232 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms