RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 DCP1AQ9NPI6 582 aaPredicted RBP27.74■■■□□ 2.03
VAPA-205ENST00000578314 PDE4DIPQ5VU43 2346 aa27.74■■■□□ 2.03
VAPA-205ENST00000578314 POLR3DP05423 398 aaPredicted RBP27.73■■■□□ 2.03
VAPA-205ENST00000578314 PRMT2P55345 433 aa27.73■■■□□ 2.03
VAPA-205ENST00000578314 SDR42E1Q8WUS8 393 aa27.73■■■□□ 2.03
VAPA-205ENST00000578314 MCM9Q9NXL9 1143 aa27.73■■■□□ 2.03
VAPA-205ENST00000578314 C19orf81C9J6K1 198 aa27.72■■■□□ 2.03
VAPA-205ENST00000578314 MBD4O95243 580 aa27.72■■■□□ 2.03
VAPA-205ENST00000578314 CHGBP05060 677 aa27.72■■■□□ 2.03
VAPA-205ENST00000578314 PSMC4P43686 418 aa27.72■■■□□ 2.03
VAPA-205ENST00000578314 GABPAQ06546 454 aa27.72■■■□□ 2.03
VAPA-205ENST00000578314 TRIM47Q96LD4 638 aa27.72■■■□□ 2.03
VAPA-205ENST00000578314 PNMA3Q9UL41 463 aa27.72■■■□□ 2.03
VAPA-205ENST00000578314 PTCH2Q9Y6C5 1203 aa27.72■■■□□ 2.03
VAPA-205ENST00000578314 GH2P01242 217 aa27.71■■■□□ 2.03
VAPA-205ENST00000578314 PABPC4Q13310 644 aaKnown RBP eCLIP27.71■■■□□ 2.03
VAPA-205ENST00000578314 MTMR2Q13614 643 aa27.71■■■□□ 2.03
VAPA-205ENST00000578314 AAMPQ13685 434 aa27.71■■■□□ 2.03
VAPA-205ENST00000578314 CERKLQ49MI3 558 aaPredicted RBP27.71■■■□□ 2.03
VAPA-205ENST00000578314 ATP8A2Q9NTI2 1148 aa27.71■■■□□ 2.03
VAPA-205ENST00000578314 TTC41PQ6P2S7 1318 aa27.7■■■□□ 2.03
VAPA-205ENST00000578314 ZSWIM8A7E2V4 1837 aa27.7■■■□□ 2.02
VAPA-205ENST00000578314 USP17L10C9JJH3 530 aa27.7■■■□□ 2.02
VAPA-205ENST00000578314 SHMT1P34896 483 aa27.7■■■□□ 2.02
VAPA-205ENST00000578314 HDAC1Q13547 482 aaPredicted RBP27.7■■■□□ 2.02
VAPA-205ENST00000578314 TSHZ3Q63HK5 1081 aa27.7■■■□□ 2.02
VAPA-205ENST00000578314 KBTBD3Q8NAB2 608 aa27.7■■■□□ 2.02
VAPA-205ENST00000578314 SMCR8Q8TEV9 937 aaPredicted RBP27.7■■■□□ 2.02
VAPA-205ENST00000578314 TAOK2Q9UL54 1235 aa27.7■■■□□ 2.02
VAPA-205ENST00000578314 PTPRFP10586 1907 aa27.69■■■□□ 2.02
VAPA-205ENST00000578314 RBBP6Q7Z6E9 1792 aaKnown RBP27.69■■■□□ 2.02
VAPA-205ENST00000578314 PRKAB2O43741 272 aa27.69■■■□□ 2.02
VAPA-205ENST00000578314 FMNL1O95466 1100 aaPredicted RBP27.69■■■□□ 2.02
VAPA-205ENST00000578314 HOXD10P28358 340 aa27.69■■■□□ 2.02
VAPA-205ENST00000578314 PUS7LQ9H0K6 701 aaKnown RBP27.69■■■□□ 2.02
VAPA-205ENST00000578314 SRRDQ9UH36 339 aa27.69■■■□□ 2.02
VAPA-205ENST00000578314 OSBPP22059 807 aa27.68■■■□□ 2.02
VAPA-205ENST00000578314 HOXA7P31268 230 aaPredicted RBP27.68■■■□□ 2.02
VAPA-205ENST00000578314 TMOD4Q9NZQ9 345 aa27.68■■■□□ 2.02
VAPA-205ENST00000578314 MYH1P12882 1939 aa27.67■■■□□ 2.02
VAPA-205ENST00000578314 POTEFA5A3E0 1075 aa27.67■■■□□ 2.02
VAPA-205ENST00000578314 FCGRTP55899 365 aa27.67■■■□□ 2.02
VAPA-205ENST00000578314 ABCB5Q2M3G0 1257 aa27.67■■■□□ 2.02
VAPA-205ENST00000578314 NBPF11Q86T75 865 aa27.67■■■□□ 2.02
VAPA-205ENST00000578314 ECM2O94769 699 aaPredicted RBP27.66■■■□□ 2.02
VAPA-205ENST00000578314 EVX2Q03828 476 aa27.66■■■□□ 2.02
VAPA-205ENST00000578314 SLC9C1Q4G0N8 1177 aa27.66■■■□□ 2.02
VAPA-205ENST00000578314 PI4K2BQ8TCG2 481 aa27.66■■■□□ 2.02
VAPA-205ENST00000578314 OTUD7AQ8TE49 926 aaPredicted RBP27.66■■■□□ 2.02
VAPA-205ENST00000578314 GCC1Q96CN9 775 aa27.66■■■□□ 2.02
VAPA-205ENST00000578314 ZNF333Q96JL9 665 aa27.66■■■□□ 2.02
VAPA-205ENST00000578314 ASCC2Q9H1I8 757 aaPredicted RBP27.66■■■□□ 2.02
VAPA-205ENST00000578314 CABP5Q9NP86 173 aa27.66■■■□□ 2.02
VAPA-205ENST00000578314 ATAD5Q96QE3 1844 aa27.66■■■□□ 2.02
VAPA-205ENST00000578314 ERC2O15083 957 aa27.65■■■□□ 2.02
VAPA-205ENST00000578314 CYP2D6P10635 497 aa27.65■■■□□ 2.02
VAPA-205ENST00000578314 GCLCP48506 637 aaPredicted RBP27.65■■■□□ 2.02
VAPA-205ENST00000578314 FAM110CQ1W6H9 321 aa27.65■■■□□ 2.02
VAPA-205ENST00000578314 USP17L2Q6R6M4 530 aa27.65■■■□□ 2.02
VAPA-205ENST00000578314 ANKRD13CQ8N6S4 541 aa27.65■■■□□ 2.02
VAPA-205ENST00000578314 EMILIN3Q9NT22 766 aa27.65■■■□□ 2.02
VAPA-205ENST00000578314 SLC4A4Q9Y6R1 1079 aa27.65■■■□□ 2.02
VAPA-205ENST00000578314 DDX60LQ5H9U9 1706 aaKnown RBP27.64■■■□□ 2.02
VAPA-205ENST00000578314 RNF113AO15541 343 aaKnown RBP27.64■■■□□ 2.02
VAPA-205ENST00000578314 GLRX3O76003 335 aaKnown RBP27.64■■■□□ 2.02
VAPA-205ENST00000578314 RAB3GAP1Q15042 981 aa27.64■■■□□ 2.02
VAPA-205ENST00000578314 STRBPQ96SI9 672 aaKnown RBP27.64■■■□□ 2.02
VAPA-205ENST00000578314 SWAP70Q9UH65 585 aa27.64■■■□□ 2.02
VAPA-205ENST00000578314 LOC285556D6RIA3 1793 aa27.63■■■□□ 2.01
VAPA-205ENST00000578314 ZFYP08048 801 aaPredicted RBP27.63■■■□□ 2.01
VAPA-205ENST00000578314 GUCY1A2P33402 732 aa27.63■■■□□ 2.01
VAPA-205ENST00000578314 ANKRD45Q5TZF3 282 aa27.63■■■□□ 2.01
VAPA-205ENST00000578314 C12orf60Q5U649 245 aa27.63■■■□□ 2.01
VAPA-205ENST00000578314 C12orf42Q96LP6 360 aa27.63■■■□□ 2.01
VAPA-205ENST00000578314 SALL3Q9BXA9 1300 aa27.63■■■□□ 2.01
VAPA-205ENST00000578314 USP17L12C9JPN9 530 aa27.62■■■□□ 2.01
VAPA-205ENST00000578314 USP17L21D6R901 530 aa27.62■■■□□ 2.01
VAPA-205ENST00000578314 MX1P20591 662 aa27.62■■■□□ 2.01
VAPA-205ENST00000578314 PRPF38BQ5VTL8 546 aaKnown RBP27.62■■■□□ 2.01
VAPA-205ENST00000578314 APPBP2Q92624 585 aa27.62■■■□□ 2.01
VAPA-205ENST00000578314 OSBP2Q969R2 916 aa27.62■■■□□ 2.01
VAPA-205ENST00000578314 DDRGK1Q96HY6 314 aa27.62■■■□□ 2.01
VAPA-205ENST00000578314 BRCA2P51587 3418 aa27.62■■■□□ 2.01
VAPA-205ENST00000578314 MYPNQ86TC9 1320 aa27.62■■■□□ 2.01
VAPA-205ENST00000578314 IRX3P78415 501 aaPredicted RBP27.61■■■□□ 2.01
VAPA-205ENST00000578314 DYNLL2Q96FJ2 89 aa27.61■■■□□ 2.01
VAPA-205ENST00000578314 P2RX7Q99572 595 aaKnown RBP27.61■■■□□ 2.01
VAPA-205ENST00000578314 KIAA1683Q9H0B3 1180 aa27.61■■■□□ 2.01
VAPA-205ENST00000578314 ZBTB47Q9UFB7 747 aaPredicted RBP27.61■■■□□ 2.01
VAPA-205ENST00000578314 USP14P54578 494 aa27.6■■■□□ 2.01
VAPA-205ENST00000578314 PRKCZQ05513 592 aa27.6■■■□□ 2.01
VAPA-205ENST00000578314 LRRFIP1Q32MZ4 808 aaKnown RBP27.6■■■□□ 2.01
VAPA-205ENST00000578314 CTR9Q6PD62 1173 aa27.6■■■□□ 2.01
VAPA-205ENST00000578314 AMOTL1Q8IY63 956 aa27.6■■■□□ 2.01
VAPA-205ENST00000578314 SLC44A5Q8NCS7 719 aa27.6■■■□□ 2.01
VAPA-205ENST00000578314 RAET1EQ8TD07 263 aa27.6■■■□□ 2.01
VAPA-205ENST00000578314 ACER1Q8TDN7 264 aa27.6■■■□□ 2.01
VAPA-205ENST00000578314 SH3TC2Q8TF17 1288 aa27.6■■■□□ 2.01
VAPA-205ENST00000578314 MORF4L1Q9UBU8 362 aa27.6■■■□□ 2.01
VAPA-205ENST00000578314 KIAA0100Q14667 2235 aaKnown RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms