RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 USP17L12C9JPN9 530 aa27.72■■■□□ 2.03
LIMD2-204ENST00000578297 USP17L21D6R901 530 aa27.72■■■□□ 2.03
LIMD2-204ENST00000578297 GDF11O95390 407 aa27.72■■■□□ 2.03
LIMD2-204ENST00000578297 CYP2D6P10635 497 aa27.72■■■□□ 2.03
LIMD2-204ENST00000578297 PDE4AP27815 886 aa27.72■■■□□ 2.03
LIMD2-204ENST00000578297 SHMT1P34896 483 aa27.72■■■□□ 2.03
LIMD2-204ENST00000578297 EVX2Q03828 476 aa27.72■■■□□ 2.03
LIMD2-204ENST00000578297 C12orf60Q5U649 245 aa27.72■■■□□ 2.03
LIMD2-204ENST00000578297 TRIM75PA6NK02 468 aa27.71■■■□□ 2.03
LIMD2-204ENST00000578297 GPR25O00155 361 aa27.71■■■□□ 2.03
LIMD2-204ENST00000578297 CRHR2Q13324 411 aa27.71■■■□□ 2.03
LIMD2-204ENST00000578297 CERKLQ49MI3 558 aaPredicted RBP27.71■■■□□ 2.03
LIMD2-204ENST00000578297 CTR9Q6PD62 1173 aa27.71■■■□□ 2.03
LIMD2-204ENST00000578297 FASTKD5Q7L8L6 764 aaKnown RBP27.71■■■□□ 2.03
LIMD2-204ENST00000578297 ANKRD23Q86SG2 305 aa27.71■■■□□ 2.03
LIMD2-204ENST00000578297 ZNF280CQ8ND82 737 aa27.71■■■□□ 2.03
LIMD2-204ENST00000578297 RILPL2Q969X0 211 aa27.71■■■□□ 2.03
LIMD2-204ENST00000578297 AS3MTQ9HBK9 375 aa27.71■■■□□ 2.03
LIMD2-204ENST00000578297 SWAP70Q9UH65 585 aa27.71■■■□□ 2.03
LIMD2-204ENST00000578297 ZBTB21Q9ULJ3 1066 aa27.71■■■□□ 2.03
LIMD2-204ENST00000578297 PATL2C9JE40 543 aaKnown RBP27.7■■■□□ 2.02
LIMD2-204ENST00000578297 WDR18Q9BV38 432 aa27.7■■■□□ 2.02
LIMD2-204ENST00000578297 ARPP21Q9UBL0 812 aaPredicted RBP27.7■■■□□ 2.02
LIMD2-204ENST00000578297 PTPRFP10586 1907 aa27.69■■■□□ 2.02
LIMD2-204ENST00000578297 SPP2Q13103 211 aa27.69■■■□□ 2.02
LIMD2-204ENST00000578297 TAF1CQ15572 869 aaPredicted RBP27.69■■■□□ 2.02
LIMD2-204ENST00000578297 SHROOM1Q2M3G4 852 aaPredicted RBP27.69■■■□□ 2.02
LIMD2-204ENST00000578297 SBK1Q52WX2 424 aa27.69■■■□□ 2.02
LIMD2-204ENST00000578297 ZNF296Q8WUU4 475 aaPredicted RBP27.69■■■□□ 2.02
LIMD2-204ENST00000578297 ZFYVE28Q9HCC9 887 aa27.69■■■□□ 2.02
LIMD2-204ENST00000578297 HELLSQ9NRZ9 838 aa27.69■■■□□ 2.02
LIMD2-204ENST00000578297 CYP2D7A0A087X1C5 515 aa27.68■■■□□ 2.02
LIMD2-204ENST00000578297 GH2P01242 217 aa27.68■■■□□ 2.02
LIMD2-204ENST00000578297 PDHXO00330 501 aa27.67■■■□□ 2.02
LIMD2-204ENST00000578297 ABCB5Q2M3G0 1257 aa27.67■■■□□ 2.02
LIMD2-204ENST00000578297 GPAT2Q6NUI2 795 aa27.67■■■□□ 2.02
LIMD2-204ENST00000578297 DYNLL2Q96FJ2 89 aa27.67■■■□□ 2.02
LIMD2-204ENST00000578297 EPB41L4AQ9HCS5 686 aaPredicted RBP27.67■■■□□ 2.02
LIMD2-204ENST00000578297 FKTNO75072 461 aa27.66■■■□□ 2.02
LIMD2-204ENST00000578297 APPP05067 770 aa27.66■■■□□ 2.02
LIMD2-204ENST00000578297 C16orf86Q6ZW13 317 aa27.66■■■□□ 2.02
LIMD2-204ENST00000578297 IFNL3Q8IZI9 196 aa27.66■■■□□ 2.02
LIMD2-204ENST00000578297 CABP5Q9NP86 173 aa27.66■■■□□ 2.02
LIMD2-204ENST00000578297 SMIM22K7EJ46 135 aa27.65■■■□□ 2.02
LIMD2-204ENST00000578297 SH3D19Q5HYK7 790 aa27.65■■■□□ 2.02
LIMD2-204ENST00000578297 GADL1Q6ZQY3 521 aa27.65■■■□□ 2.02
LIMD2-204ENST00000578297 TNS4Q8IZW8 715 aa27.65■■■□□ 2.02
LIMD2-204ENST00000578297 PROCA1Q8NCQ7 364 aaPredicted RBP27.65■■■□□ 2.02
LIMD2-204ENST00000578297 SLC44A5Q8NCS7 719 aa27.65■■■□□ 2.02
LIMD2-204ENST00000578297 NACAP1Q9BZK3 213 aa27.65■■■□□ 2.02
LIMD2-204ENST00000578297 SLC45A1Q9Y2W3 748 aa27.65■■■□□ 2.02
LIMD2-204ENST00000578297 SDSP20132 328 aa27.64■■■□□ 2.02
LIMD2-204ENST00000578297 TDO2P48775 406 aa27.64■■■□□ 2.02
LIMD2-204ENST00000578297 CDK8P49336 464 aa27.64■■■□□ 2.02
LIMD2-204ENST00000578297 MCMDC2Q4G0Z9 681 aa27.64■■■□□ 2.02
LIMD2-204ENST00000578297 CCDC129Q6ZRS4 1044 aa27.64■■■□□ 2.02
LIMD2-204ENST00000578297 FAM227BQ96M60 508 aa27.64■■■□□ 2.02
LIMD2-204ENST00000578297 A0A0D9SFI3 127 aa27.63■■■□□ 2.01
LIMD2-204ENST00000578297 TLR2O60603 784 aa27.63■■■□□ 2.01
LIMD2-204ENST00000578297 BACE1P56817 501 aa27.63■■■□□ 2.01
LIMD2-204ENST00000578297 RAB3GAP1Q15042 981 aa27.63■■■□□ 2.01
LIMD2-204ENST00000578297 CENPQQ7L2Z9 268 aaPredicted RBP27.63■■■□□ 2.01
LIMD2-204ENST00000578297 AGTPBP1Q9UPW5 1226 aa27.63■■■□□ 2.01
LIMD2-204ENST00000578297 C19orf81C9J6K1 198 aa27.62■■■□□ 2.01
LIMD2-204ENST00000578297 USP17L10C9JJH3 530 aa27.62■■■□□ 2.01
LIMD2-204ENST00000578297 CENPBP07199 599 aaPredicted RBP27.62■■■□□ 2.01
LIMD2-204ENST00000578297 HMGCS2P54868 508 aa27.62■■■□□ 2.01
LIMD2-204ENST00000578297 NMIQ13287 307 aaPredicted RBP27.62■■■□□ 2.01
LIMD2-204ENST00000578297 MTMR2Q13614 643 aa27.62■■■□□ 2.01
LIMD2-204ENST00000578297 TTC22Q5TAA0 569 aa27.62■■■□□ 2.01
LIMD2-204ENST00000578297 ROBO3Q96MS0 1386 aa27.61■■■□□ 2.01
LIMD2-204ENST00000578297 MYH8P13535 1937 aa27.61■■■□□ 2.01
LIMD2-204ENST00000578297 LOC285556D6RIA3 1793 aa27.61■■■□□ 2.01
LIMD2-204ENST00000578297 MINDY4BA8MYZ0 360 aa27.61■■■□□ 2.01
LIMD2-204ENST00000578297 GUCY1A2P33402 732 aa27.61■■■□□ 2.01
LIMD2-204ENST00000578297 CCDC17Q96LX7 622 aa27.61■■■□□ 2.01
LIMD2-204ENST00000578297 HIP1O00291 1037 aa27.6■■■□□ 2.01
LIMD2-204ENST00000578297 MPHOSPH10O00566 681 aaKnown RBP27.6■■■□□ 2.01
LIMD2-204ENST00000578297 FOXP2O15409 715 aa27.6■■■□□ 2.01
LIMD2-204ENST00000578297 NEFLP07196 543 aa27.6■■■□□ 2.01
LIMD2-204ENST00000578297 GSPT1P15170 499 aaKnown RBP27.6■■■□□ 2.01
LIMD2-204ENST00000578297 SP3Q02447 781 aa27.6■■■□□ 2.01
LIMD2-204ENST00000578297 TMEM179Q6ZVK1 233 aa27.6■■■□□ 2.01
LIMD2-204ENST00000578297 PARK7Q99497 189 aaKnown RBP27.6■■■□□ 2.01
LIMD2-204ENST00000578297 NAPBQ9H115 298 aa27.6■■■□□ 2.01
LIMD2-204ENST00000578297 SEPT2Q15019 361 aa27.59■■■□□ 2.01
LIMD2-204ENST00000578297 TREML2Q5T2D2 321 aa27.59■■■□□ 2.01
LIMD2-204ENST00000578297 CTU1Q7Z7A3 348 aaKnown RBP27.59■■■□□ 2.01
LIMD2-204ENST00000578297 AKR1B1P15121 316 aa27.58■■■□□ 2.01
LIMD2-204ENST00000578297 VPS53Q5VIR6 699 aa27.58■■■□□ 2.01
LIMD2-204ENST00000578297 C17orf99Q6UX52 265 aa27.58■■■□□ 2.01
LIMD2-204ENST00000578297 TMOD4Q9NZQ9 345 aa27.58■■■□□ 2.01
LIMD2-204ENST00000578297 ADGRA2Q96PE1 1338 aa27.58■■■□□ 2.01
LIMD2-204ENST00000578297 CYP2C8P10632 490 aa27.57■■■□□ 2
LIMD2-204ENST00000578297 PABPC4Q13310 644 aaKnown RBP eCLIP27.57■■■□□ 2
LIMD2-204ENST00000578297 DGKZQ13574 1117 aa27.57■■■□□ 2
LIMD2-204ENST00000578297 ZNF589Q86UQ0 364 aaPredicted RBP27.57■■■□□ 2
LIMD2-204ENST00000578297 ERO1AQ96HE7 468 aa27.57■■■□□ 2
LIMD2-204ENST00000578297 DIAPH3Q9NSV4 1193 aa27.57■■■□□ 2
LIMD2-204ENST00000578297 MFAP1P55081 439 aaKnown RBP27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms