RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 SH3TC2Q8TF17 1288 aa15.45■□□□□ 0.06
CCDC57-211ENST00000578187 TRIM47Q96LD4 638 aa15.45■□□□□ 0.06
CCDC57-211ENST00000578187 AS3MTQ9HBK9 375 aa15.45■□□□□ 0.06
CCDC57-211ENST00000578187 PI4KBQ9UBF8 816 aa15.45■□□□□ 0.06
CCDC57-211ENST00000578187 ZBTB47Q9UFB7 747 aaPredicted RBP15.45■□□□□ 0.06
CCDC57-211ENST00000578187 ADGRA2Q96PE1 1338 aa15.44■□□□□ 0.06
CCDC57-211ENST00000578187 MYCP01106 439 aaPredicted RBP15.44■□□□□ 0.06
CCDC57-211ENST00000578187 EN2P19622 333 aaPredicted RBP15.44■□□□□ 0.06
CCDC57-211ENST00000578187 SLC9C2Q5TAH2 1124 aa15.44■□□□□ 0.06
CCDC57-211ENST00000578187 CRACR2BQ8N4Y2 399 aaPredicted RBP15.44■□□□□ 0.06
CCDC57-211ENST00000578187 PROCA1Q8NCQ7 364 aaPredicted RBP15.44■□□□□ 0.06
CCDC57-211ENST00000578187 RIOK1Q9BRS2 568 aaKnown RBP15.44■□□□□ 0.06
CCDC57-211ENST00000578187 BIN2Q9UBW5 565 aaPredicted RBP15.44■□□□□ 0.06
CCDC57-211ENST00000578187 AGTPBP1Q9UPW5 1226 aa15.44■□□□□ 0.06
CCDC57-211ENST00000578187 ZSWIM8A7E2V4 1837 aa15.44■□□□□ 0.06
CCDC57-211ENST00000578187 ZNF532Q9HCE3 1301 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 ERC2O15083 957 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 GLRX3O76003 335 aaKnown RBP15.43■□□□□ 0.06
CCDC57-211ENST00000578187 HLA-DOAP06340 250 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 BCRP11274 1271 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 OSBPP22059 807 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 GRK4P32298 578 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 ADD2P35612 726 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 DYNLL1P63167 89 aaKnown RBP15.43■□□□□ 0.06
CCDC57-211ENST00000578187 UBXN2AP68543 259 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 NUCB1Q02818 461 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 MIGA1Q8NAN2 632 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 ZNF280CQ8ND82 737 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 NKX2-3Q8TAU0 364 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 LNPKQ9C0E8 428 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.43■□□□□ 0.063e-7■■□□□ 12.9
CCDC57-211ENST00000578187 STAP2Q9UGK3 403 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 PHIPQ8WWQ0 1821 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 FLT1P17948 1338 aa15.43■□□□□ 0.06
CCDC57-211ENST00000578187 FAM196BA6NMK8 535 aa15.42■□□□□ 0.06
CCDC57-211ENST00000578187 USP17L5A8MUK1 530 aa15.42■□□□□ 0.06
CCDC57-211ENST00000578187 CAP2P40123 477 aa15.42■□□□□ 0.06
CCDC57-211ENST00000578187 CHD1LQ86WJ1 897 aa15.42■□□□□ 0.06
CCDC57-211ENST00000578187 KBTBD3Q8NAB2 608 aa15.42■□□□□ 0.06
CCDC57-211ENST00000578187 TGFBRAP1Q8WUH2 860 aa15.42■□□□□ 0.06
CCDC57-211ENST00000578187 BAZ2AQ9UIF9 1905 aaKnown RBP15.42■□□□□ 0.06
CCDC57-211ENST00000578187 PTPRFP10586 1907 aa15.41■□□□□ 0.06
CCDC57-211ENST00000578187 MAGEB6P1A0A0J9YX57 407 aa15.41■□□□□ 0.06
CCDC57-211ENST00000578187 TNPO2O14787 897 aaKnown RBP15.41■□□□□ 0.06
CCDC57-211ENST00000578187 ABCB7O75027 752 aa15.41■□□□□ 0.06
CCDC57-211ENST00000578187 ASNSP08243 561 aa15.41■□□□□ 0.06
CCDC57-211ENST00000578187 PDE1AP54750 535 aa15.41■□□□□ 0.06
CCDC57-211ENST00000578187 SPP2Q13103 211 aa15.41■□□□□ 0.06
CCDC57-211ENST00000578187 UBE3CQ15386 1083 aa15.41■□□□□ 0.06
CCDC57-211ENST00000578187 B4GALNT3Q6L9W6 998 aa15.41■□□□□ 0.06
CCDC57-211ENST00000578187 FOXP4Q8IVH2 680 aaPredicted RBP15.41■□□□□ 0.06
CCDC57-211ENST00000578187 MAPKAPK5Q8IW41 473 aa15.41■□□□□ 0.06
CCDC57-211ENST00000578187 SLAIN1Q8ND83 568 aa15.41■□□□□ 0.06
CCDC57-211ENST00000578187 MGAMO43451 1857 aa15.4■□□□□ 0.06
CCDC57-211ENST00000578187 SLURP2P0DP57 97 aa15.4■□□□□ 0.06
CCDC57-211ENST00000578187 GCLCP48506 637 aaPredicted RBP15.4■□□□□ 0.06
CCDC57-211ENST00000578187 PRKCZQ05513 592 aa15.4■□□□□ 0.06
CCDC57-211ENST00000578187 ZSCAN25Q6NSZ9 544 aa15.4■□□□□ 0.06
CCDC57-211ENST00000578187 COA7Q96BR5 231 aa15.4■□□□□ 0.06
CCDC57-211ENST00000578187 GINM1Q9NU53 330 aa15.4■□□□□ 0.06
CCDC57-211ENST00000578187 TMOD4Q9NZQ9 345 aa15.4■□□□□ 0.06
CCDC57-211ENST00000578187 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.4■□□□□ 0.06
CCDC57-211ENST00000578187 MYH8P13535 1937 aa15.4■□□□□ 0.06
CCDC57-211ENST00000578187 PDE4DIPQ5VU43 2346 aa15.4■□□□□ 0.06
CCDC57-211ENST00000578187 BRCA2P51587 3418 aa15.4■□□□□ 0.06
CCDC57-211ENST00000578187 LOC285556D6RIA3 1793 aa15.39■□□□□ 0.05
CCDC57-211ENST00000578187 CHGBP05060 677 aa15.39■□□□□ 0.05
CCDC57-211ENST00000578187 CTGFP29279 349 aa15.39■□□□□ 0.05
CCDC57-211ENST00000578187 USP5P45974 858 aa15.39■□□□□ 0.05
CCDC57-211ENST00000578187 HMGCS2P54868 508 aa15.39■□□□□ 0.05
CCDC57-211ENST00000578187 SLFNL1Q499Z3 407 aa15.39■□□□□ 0.05
CCDC57-211ENST00000578187 CCDC84Q86UT8 332 aaPredicted RBP15.39■□□□□ 0.05
CCDC57-211ENST00000578187 ANKRD13CQ8N6S4 541 aa15.39■□□□□ 0.05
CCDC57-211ENST00000578187 FAM110CQ1W6H9 321 aa15.38■□□□□ 0.05
CCDC57-211ENST00000578187 TREML2Q5T2D2 321 aa15.38■□□□□ 0.05
CCDC57-211ENST00000578187 LCORLQ8N3X6 602 aa15.38■□□□□ 0.05
CCDC57-211ENST00000578187 RNF208Q9H0X6 261 aa15.38■□□□□ 0.05
CCDC57-211ENST00000578187 PALD1Q9ULE6 856 aa15.38■□□□□ 0.05
CCDC57-211ENST00000578187 C19orf81C9J6K1 198 aa15.37■□□□□ 0.05
CCDC57-211ENST00000578187 ADCY3O60266 1144 aa15.37■□□□□ 0.05
CCDC57-211ENST00000578187 MBD4O95243 580 aa15.37■□□□□ 0.05
CCDC57-211ENST00000578187 ZFYP08048 801 aaPredicted RBP15.37■□□□□ 0.05
CCDC57-211ENST00000578187 CCL5P13501 91 aa15.37■□□□□ 0.05
CCDC57-211ENST00000578187 IRX3P78415 501 aaPredicted RBP15.37■□□□□ 0.05
CCDC57-211ENST00000578187 METTL16Q86W50 562 aaKnown RBP15.37■□□□□ 0.05
CCDC57-211ENST00000578187 WDR18Q9BV38 432 aa15.37■□□□□ 0.05
CCDC57-211ENST00000578187 CRNKL1Q9BZJ0 848 aaKnown RBP15.37■□□□□ 0.05
CCDC57-211ENST00000578187 OSBPL3Q9H4L5 887 aa15.37■□□□□ 0.05
CCDC57-211ENST00000578187 SAP30BPQ9UHR5 308 aaKnown RBP15.37■□□□□ 0.05
CCDC57-211ENST00000578187 TAOK2Q9UL54 1235 aa15.37■□□□□ 0.05
CCDC57-211ENST00000578187 RNF113AO15541 343 aaKnown RBP15.36■□□□□ 0.05
CCDC57-211ENST00000578187 CAPN2P17655 700 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 FLT3LGP49771 235 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 BACE1P56817 501 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 IRF5Q13568 498 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 MTMR2Q13614 643 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 MTFR1Q15390 333 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 LRRFIP1Q32MZ4 808 aaKnown RBP15.36■□□□□ 0.05
CCDC57-211ENST00000578187 SH3D19Q5HYK7 790 aa15.36■□□□□ 0.05
CCDC57-211ENST00000578187 PLEKHM2Q8IWE5 1019 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms