RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 USP17L2Q6R6M4 530 aa17.35■□□□□ 0.37
SMARCD2-205ENST00000577686 DBNDD2Q9BQY9 259 aa17.35■□□□□ 0.37
SMARCD2-205ENST00000577686 ZBTB21Q9ULJ3 1066 aa17.35■□□□□ 0.37
SMARCD2-205ENST00000577686 BCAR3O75815 825 aa17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 XRCC5P13010 732 aaKnown RBP17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 ZKSCAN1P17029 563 aaPredicted RBP17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 USP5P45974 858 aa17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 HERVK_113P62684 666 aa17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 CCNA1P78396 465 aa17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 ATP8B2P98198 1209 aa17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 METTL16Q86W50 562 aaKnown RBP17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 TMEM57Q8N5G2 664 aa17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 SSH3Q8TE77 659 aa17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 FEZ1Q99689 392 aa17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.34■□□□□ 0.37
SMARCD2-205ENST00000577686 ATAD5Q96QE3 1844 aa17.33■□□□□ 0.37
SMARCD2-205ENST00000577686 CYP2E1P05181 493 aaPredicted RBP17.33■□□□□ 0.36
SMARCD2-205ENST00000577686 CYP7A1P22680 504 aa17.33■□□□□ 0.36
SMARCD2-205ENST00000577686 RGS2P41220 211 aa17.33■□□□□ 0.36
SMARCD2-205ENST00000577686 USP14P54578 494 aa17.33■□□□□ 0.36
SMARCD2-205ENST00000577686 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.36
SMARCD2-205ENST00000577686 PRO3102Q9H379 93 aa17.33■□□□□ 0.36
SMARCD2-205ENST00000577686 C11orf49Q9H6J7 331 aa17.33■□□□□ 0.36
SMARCD2-205ENST00000577686 GJD2Q9UKL4 321 aa17.33■□□□□ 0.36
SMARCD2-205ENST00000577686 CEP290O15078 2479 aa17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 IDH1O75874 414 aaKnown RBP17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 GDF11O95390 407 aa17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 CYP2B6P20813 491 aa17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 ZAP70P43403 619 aa17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 MAP3K12Q12852 859 aa17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 RRP1BQ14684 758 aaKnown RBP17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 TTC6Q86TZ1 520 aa17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 ITPRIPQ8IWB1 547 aa17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 P2RX7Q99572 595 aaKnown RBP17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 PALD1Q9ULE6 856 aa17.32■□□□□ 0.36
SMARCD2-205ENST00000577686 BRCA2P51587 3418 aa17.31■□□□□ 0.36
SMARCD2-205ENST00000577686 PRKAR2AP13861 404 aaKnown RBP17.31■□□□□ 0.36
SMARCD2-205ENST00000577686 ERVK-9P63128 1117 aa17.31■□□□□ 0.36
SMARCD2-205ENST00000577686 ERVK-24P63145 666 aa17.31■□□□□ 0.36
SMARCD2-205ENST00000577686 C7orf61Q8IZ16 206 aa17.31■□□□□ 0.36
SMARCD2-205ENST00000577686 APBA2Q99767 749 aa17.31■□□□□ 0.36
SMARCD2-205ENST00000577686 CABP5Q9NP86 173 aa17.31■□□□□ 0.36
SMARCD2-205ENST00000577686 SAP30BPQ9UHR5 308 aaKnown RBP17.31■□□□□ 0.36
SMARCD2-205ENST00000577686 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
SMARCD2-205ENST00000577686 TRIOBPQ9H2D6 2365 aa17.31■□□□□ 0.36
SMARCD2-205ENST00000577686 USP17L15C9J2P7 530 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 USP17L13C9JLJ4 530 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 USP17L11C9JVI0 530 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 USP17L18D6R9N7 530 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 USP17L22D6RA61 530 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 USP17L17D6RBQ6 530 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 USP17L19D6RCP7 530 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 USP17L20D6RJB6 530 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 USP17L24Q0WX57 530 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 HSP90AB4PQ58FF6 505 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 PLEKHH3Q7Z736 793 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 TRIB2Q92519 343 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 PAGR1Q9BTK6 254 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 EHD4Q9H223 541 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 SERPINB13Q9UIV8 391 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 OGDHLQ9ULD0 1010 aa17.3■□□□□ 0.36
SMARCD2-205ENST00000577686 BMP8BP34820 402 aa17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 MAP3K21Q5TCX8 1036 aa17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 DIS3LQ8TF46 1054 aaKnown RBP17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 C12orf42Q96LP6 360 aa17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 DNAJC18Q9H819 358 aa17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 PIH1D3Q9NQM4 214 aaKnown RBP17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 STAP2Q9UGK3 403 aa17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 TNNQ9UQP3 1299 aa17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 RABGAP1Q9Y3P9 1069 aa17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 IVNS1ABPQ9Y6Y0 642 aa17.29■□□□□ 0.36
SMARCD2-205ENST00000577686 GH2P01242 217 aa17.28■□□□□ 0.36
SMARCD2-205ENST00000577686 TTF1Q15361 905 aaPredicted RBP17.28■□□□□ 0.36
SMARCD2-205ENST00000577686 MFSD14CQ5VZR4 134 aa17.28■□□□□ 0.36
SMARCD2-205ENST00000577686 GPR142Q7Z601 462 aa17.28■□□□□ 0.36
SMARCD2-205ENST00000577686 ADGRA1Q86SQ6 560 aa17.28■□□□□ 0.36
SMARCD2-205ENST00000577686 MAGEB6Q8N7X4 407 aa17.28■□□□□ 0.36
SMARCD2-205ENST00000577686 CCDC8Q9H0W5 538 aaPredicted RBP17.28■□□□□ 0.36
SMARCD2-205ENST00000577686 DYNLL1P63167 89 aaKnown RBP17.27■□□□□ 0.36
SMARCD2-205ENST00000577686 RAB3GAP1Q15042 981 aa17.27■□□□□ 0.36
SMARCD2-205ENST00000577686 ABCB5Q2M3G0 1257 aa17.27■□□□□ 0.36
SMARCD2-205ENST00000577686 CERKLQ49MI3 558 aaPredicted RBP17.27■□□□□ 0.36
SMARCD2-205ENST00000577686 WDR78Q5VTH9 848 aa17.27■□□□□ 0.36
SMARCD2-205ENST00000577686 GPR153Q6NV75 609 aa17.27■□□□□ 0.36
SMARCD2-205ENST00000577686 MIGA1Q8NAN2 632 aa17.27■□□□□ 0.36
SMARCD2-205ENST00000577686 C1orf115Q9H7X2 142 aa17.27■□□□□ 0.36
SMARCD2-205ENST00000577686 RBPJLQ9UBG7 517 aa17.27■□□□□ 0.36
SMARCD2-205ENST00000577686 MSCO60682 206 aa17.26■□□□□ 0.35
SMARCD2-205ENST00000577686 MS4A1P11836 297 aa17.26■□□□□ 0.35
SMARCD2-205ENST00000577686 TRIM32Q13049 653 aa17.26■□□□□ 0.35
SMARCD2-205ENST00000577686 TATDN1Q6P1N9 297 aa17.26■□□□□ 0.35
SMARCD2-205ENST00000577686 GDF15Q99988 308 aa17.26■□□□□ 0.35
SMARCD2-205ENST00000577686 KIAA1683Q9H0B3 1180 aa17.26■□□□□ 0.35
SMARCD2-205ENST00000577686 TXNRD2Q9NNW7 524 aa17.26■□□□□ 0.35
SMARCD2-205ENST00000577686 EMILIN3Q9NT22 766 aa17.26■□□□□ 0.35
SMARCD2-205ENST00000577686 ZMYND8Q9ULU4 1186 aaPredicted RBP17.26■□□□□ 0.35
SMARCD2-205ENST00000577686 POLR3DP05423 398 aaPredicted RBP17.25■□□□□ 0.35
SMARCD2-205ENST00000577686 CACNB2Q08289 660 aaPredicted RBP17.25■□□□□ 0.35
SMARCD2-205ENST00000577686 MAP2K5Q13163 448 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms