RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 PRR33A8MZF0 331 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 C8AP07357 584 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 DAB2P98082 770 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 MEI1Q5TIA1 1274 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 PRAMEF13Q5VWM6 474 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 LETMD1Q6P1Q0 360 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 NPAS4Q8IUM7 802 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 MFSD4AQ8N468 514 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 TMEM40Q8WWA1 233 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 COX4I2Q96KJ9 171 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 NOC4LQ9BVI4 516 aaKnown RBP8.82□□□□□ -1
SMCHD1-202ENST00000577300 MIR1-1HGQ9H1L0 117 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 PRDM7Q9NQW5 492 aa8.82□□□□□ -1
SMCHD1-202ENST00000577300 FAM155AB1AL88 458 aaPredicted RBP8.81□□□□□ -1
SMCHD1-202ENST00000577300 TFE3P19532 575 aaPredicted RBP8.81□□□□□ -1
SMCHD1-202ENST00000577300 ST13P50502 369 aaKnown RBP8.81□□□□□ -1
SMCHD1-202ENST00000577300 MAP3K11Q16584 847 aa8.81□□□□□ -1
SMCHD1-202ENST00000577300 DNAJC14Q6Y2X3 702 aaPredicted RBP8.81□□□□□ -1
SMCHD1-202ENST00000577300 AEBP1Q8IUX7 1158 aa8.81□□□□□ -1
SMCHD1-202ENST00000577300 MRPL41Q8IXM3 137 aaKnown RBP8.81□□□□□ -1
SMCHD1-202ENST00000577300 RIN3Q8TB24 985 aa8.81□□□□□ -1
SMCHD1-202ENST00000577300 HSPA12BQ96MM6 686 aa8.81□□□□□ -1
SMCHD1-202ENST00000577300 CAPN6Q9Y6Q1 641 aa8.81□□□□□ -1
SMCHD1-202ENST00000577300 PSMD2Q13200 908 aa8.8□□□□□ -1
SMCHD1-202ENST00000577300 TAF1CQ15572 869 aaPredicted RBP8.8□□□□□ -1
SMCHD1-202ENST00000577300 TSNAXIP1Q2TAA8 658 aa8.8□□□□□ -1
SMCHD1-202ENST00000577300 PDIA4P13667 645 aaKnown RBP8.79□□□□□ -1
SMCHD1-202ENST00000577300 CYP7A1P22680 504 aa8.79□□□□□ -1
SMCHD1-202ENST00000577300 FZD5Q13467 585 aa8.79□□□□□ -1
SMCHD1-202ENST00000577300 TMC4Q7Z404 712 aa8.79□□□□□ -1
SMCHD1-202ENST00000577300 TJP2Q9UDY2 1190 aa8.79□□□□□ -1
SMCHD1-202ENST00000577300 CTNND2Q9UQB3 1225 aa8.79□□□□□ -1
SMCHD1-202ENST00000577300 ST14Q9Y5Y6 855 aa8.79□□□□□ -1
SMCHD1-202ENST00000577300 USP31Q70CQ4 1352 aa8.78□□□□□ -1
SMCHD1-202ENST00000577300 PGRP06401 933 aa8.78□□□□□ -1
SMCHD1-202ENST00000577300 KIR3DL1P43629 444 aa8.78□□□□□ -1
SMCHD1-202ENST00000577300 RPL6Q02878 288 aaKnown RBP8.78□□□□□ -1
SMCHD1-202ENST00000577300 PDE4BQ07343 736 aa8.78□□□□□ -1
SMCHD1-202ENST00000577300 SLC6A19Q695T7 634 aa8.78□□□□□ -1
SMCHD1-202ENST00000577300 THAP5Q7Z6K1 395 aa8.78□□□□□ -1
SMCHD1-202ENST00000577300 CCDC84Q86UT8 332 aaPredicted RBP8.78□□□□□ -1
SMCHD1-202ENST00000577300 ATP13A1Q9HD20 1204 aa8.78□□□□□ -1
SMCHD1-202ENST00000577300 CTSHP09668 335 aa8.77□□□□□ -1.01
SMCHD1-202ENST00000577300 XPCQ01831 940 aaPredicted RBP8.77□□□□□ -1.01
SMCHD1-202ENST00000577300 CDKAL1Q5VV42 579 aa8.77□□□□□ -1.01
SMCHD1-202ENST00000577300 ZSWIM9Q86XI8 627 aa8.77□□□□□ -1.01
SMCHD1-202ENST00000577300 XAGE3Q8WTP9 111 aa8.77□□□□□ -1.01
SMCHD1-202ENST00000577300 TMEM87BQ96K49 555 aa8.77□□□□□ -1.01
SMCHD1-202ENST00000577300 CARS2Q9HA77 564 aaKnown RBP8.77□□□□□ -1.01
SMCHD1-202ENST00000577300 ADAM30Q9UKF2 790 aa8.77□□□□□ -1.01
SMCHD1-202ENST00000577300 ARID1BQ8NFD5 2236 aaPredicted RBP8.76□□□□□ -1.01
SMCHD1-202ENST00000577300 H3BS24 57 aa8.76□□□□□ -1.01
SMCHD1-202ENST00000577300 FARP2O94887 1054 aaPredicted RBP8.76□□□□□ -1.01
SMCHD1-202ENST00000577300 JAG1P78504 1218 aa8.76□□□□□ -1.01
SMCHD1-202ENST00000577300 FBXO33Q7Z6M2 555 aa8.76□□□□□ -1.01
SMCHD1-202ENST00000577300 MCATQ8IVS2 390 aaKnown RBP8.76□□□□□ -1.01
SMCHD1-202ENST00000577300 PHC3Q8NDX5 983 aa8.76□□□□□ -1.01
SMCHD1-202ENST00000577300 TLR6Q9Y2C9 796 aa8.76□□□□□ -1.01
SMCHD1-202ENST00000577300 CBX7O95931 251 aa8.75□□□□□ -1.01
SMCHD1-202ENST00000577300 AFMP43652 599 aa8.75□□□□□ -1.01
SMCHD1-202ENST00000577300 ZNF648Q5T619 568 aaPredicted RBP8.75□□□□□ -1.01
SMCHD1-202ENST00000577300 DIEXFQ68CQ4 756 aaKnown RBP8.75□□□□□ -1.01
SMCHD1-202ENST00000577300 CDH24Q86UP0 819 aa8.75□□□□□ -1.01
SMCHD1-202ENST00000577300 ETV3P41162 512 aa8.74□□□□□ -1.01
SMCHD1-202ENST00000577300 KCNMB1Q16558 191 aa8.74□□□□□ -1.01
SMCHD1-202ENST00000577300 PIWIL2Q8TC59 973 aaKnown RBP8.74□□□□□ -1.01
SMCHD1-202ENST00000577300 JARID2Q92833 1246 aaPredicted RBP8.74□□□□□ -1.01
SMCHD1-202ENST00000577300 ACSF2Q96CM8 615 aaPredicted RBP8.74□□□□□ -1.01
SMCHD1-202ENST00000577300 DPH2Q9BQC3 489 aaPredicted RBP8.74□□□□□ -1.01
SMCHD1-202ENST00000577300 FAM53CQ9NYF3 392 aa8.74□□□□□ -1.01
SMCHD1-202ENST00000577300 TNK2Q07912 1038 aa8.73□□□□□ -1.01
SMCHD1-202ENST00000577300 CRELD1Q96HD1 420 aa8.73□□□□□ -1.01
SMCHD1-202ENST00000577300 ZNF503-AS2A6NEH8 195 aa8.72□□□□□ -1.01
SMCHD1-202ENST00000577300 GDNFP39905 211 aa8.72□□□□□ -1.01
SMCHD1-202ENST00000577300 LMNB2Q03252 620 aa8.72□□□□□ -1.01
SMCHD1-202ENST00000577300 DNAJB8Q8NHS0 232 aa8.72□□□□□ -1.01
SMCHD1-202ENST00000577300 UBE2FQ969M7 185 aa8.72□□□□□ -1.01
SMCHD1-202ENST00000577300 CCDC120Q96HB5 630 aa8.72□□□□□ -1.01
SMCHD1-202ENST00000577300 FAM161BQ96MY7 647 aa8.72□□□□□ -1.01
SMCHD1-202ENST00000577300 C19orf73Q9NVV2 129 aa8.72□□□□□ -1.01
SMCHD1-202ENST00000577300 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.02
SMCHD1-202ENST00000577300 SORBS3O60504 671 aa8.71□□□□□ -1.02
SMCHD1-202ENST00000577300 CILPO75339 1184 aa8.71□□□□□ -1.02
SMCHD1-202ENST00000577300 ERCC3P19447 782 aa8.71□□□□□ -1.02
SMCHD1-202ENST00000577300 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.71□□□□□ -1.02
SMCHD1-202ENST00000577300 ZSWIM5Q9P217 1185 aa8.71□□□□□ -1.02
SMCHD1-202ENST00000577300 CEP131Q9UPN4 1083 aa8.71□□□□□ -1.02
SMCHD1-202ENST00000577300 FAM221AA4D161 298 aa8.7□□□□□ -1.02
SMCHD1-202ENST00000577300 LRRC10BA6NIK2 292 aa8.7□□□□□ -1.02
SMCHD1-202ENST00000577300 MESP2Q0VG99 397 aa8.7□□□□□ -1.02
SMCHD1-202ENST00000577300 CAMK2GQ13555 558 aaPredicted RBP8.7□□□□□ -1.02
SMCHD1-202ENST00000577300 TMEM201Q5SNT2 666 aa8.7□□□□□ -1.02
SMCHD1-202ENST00000577300 FYB2Q5VWT5 728 aa8.7□□□□□ -1.02
SMCHD1-202ENST00000577300 TMPRSS7Q7RTY8 843 aa8.7□□□□□ -1.02
SMCHD1-202ENST00000577300 GATAD2BQ8WXI9 593 aa8.7□□□□□ -1.02
SMCHD1-202ENST00000577300 ALPK1Q96QP1 1244 aa8.7□□□□□ -1.02
SMCHD1-202ENST00000577300 CORINQ9Y5Q5 1042 aa8.7□□□□□ -1.02
SMCHD1-202ENST00000577300 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 BPNT1O95861 308 aa8.69□□□□□ -1.02
SMCHD1-202ENST00000577300 GLI1P08151 1106 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms