RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 NOVP48745 357 aa14.6□□□□□ -0.07
TSEN54-204ENST00000577197 HMGN5P82970 282 aaKnown RBP14.6□□□□□ -0.07
TSEN54-204ENST00000577197 COL9A3Q14050 684 aaPredicted RBP14.6□□□□□ -0.07
TSEN54-204ENST00000577197 WTAPQ15007 396 aa14.6□□□□□ -0.07
TSEN54-204ENST00000577197 SEC23AQ15436 765 aa14.6□□□□□ -0.07
TSEN54-204ENST00000577197 TMEM67Q5HYA8 995 aa14.6□□□□□ -0.07
TSEN54-204ENST00000577197 APOBEC3FQ8IUX4 373 aaKnown RBP14.6□□□□□ -0.07
TSEN54-204ENST00000577197 FAM151AQ8WW52 585 aa14.6□□□□□ -0.07
TSEN54-204ENST00000577197 ZSCAN10Q96SZ4 725 aaPredicted RBP14.6□□□□□ -0.07
TSEN54-204ENST00000577197 FAM198AQ9UFP1 575 aa14.6□□□□□ -0.07
TSEN54-204ENST00000577197 HERC5Q9UII4 1024 aaKnown RBP14.6□□□□□ -0.07
TSEN54-204ENST00000577197 MYH8P13535 1937 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 GREB1LQ9C091 1923 aaPredicted RBP14.59□□□□□ -0.07
TSEN54-204ENST00000577197 CYP2D7A0A087X1C5 515 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 CCDC196A0A1B0GTZ2 297 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 CLRN2A0PK11 232 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 CALM1P0DP23 149 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 CALM2P0DP24 149 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 CALM3P0DP25 149 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 RASA1P20936 1047 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 TNNI2P48788 182 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 CDK8P49336 464 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 PLCD1P51178 756 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 EAPPQ56P03 285 aaPredicted RBP14.59□□□□□ -0.07
TSEN54-204ENST00000577197 ANGEL2Q5VTE6 544 aaKnown RBP14.59□□□□□ -0.07
TSEN54-204ENST00000577197 APOA5Q6Q788 366 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 SYNE3Q6ZMZ3 975 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 LDHDQ86WU2 507 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 ZNF444Q8N0Y2 327 aaPredicted RBP14.59□□□□□ -0.07
TSEN54-204ENST00000577197 NEDD1Q8NHV4 660 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 DCPSQ96C86 337 aaKnown RBP14.59□□□□□ -0.07
TSEN54-204ENST00000577197 TCEANC2Q96MN5 208 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 MKNK2Q9HBH9 465 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 TOMM22Q9NS69 142 aa14.59□□□□□ -0.07
TSEN54-204ENST00000577197 SIPA1L1O43166 1804 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 TSPY2A6NKD2 308 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 TBC1D12O60347 775 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 RANBP6O60518 1105 aaKnown RBP14.58□□□□□ -0.08
TSEN54-204ENST00000577197 CDKL5O76039 1030 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 DDAH1O94760 285 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 CYP2D6P10635 497 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 NFIAQ12857 509 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 CPLX2Q6PUV4 134 aaKnown RBP14.58□□□□□ -0.08
TSEN54-204ENST00000577197 SMARCC2Q8TAQ2 1214 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 VEZTQ9HBM0 779 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 GGA3Q9NZ52 723 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 SYNPO2Q9UMS6 1093 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 SMC3Q9UQE7 1217 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 PPP2R3BQ9Y5P8 575 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 SLC12A7Q9Y666 1083 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 TNKSO95271 1327 aa14.58□□□□□ -0.08
TSEN54-204ENST00000577197 KLF18A0A0U1RQI7 1052 aa14.57□□□□□ -0.08
TSEN54-204ENST00000577197 CCDC69A6NI79 296 aa14.57□□□□□ -0.08
TSEN54-204ENST00000577197 LARGE1O95461 756 aa14.57□□□□□ -0.08
TSEN54-204ENST00000577197 MAP3K10Q02779 954 aa14.57□□□□□ -0.08
TSEN54-204ENST00000577197 APOBRQ0VD83 1088 aa14.57□□□□□ -0.08
TSEN54-204ENST00000577197 PICALMQ13492 652 aa14.57□□□□□ -0.08
TSEN54-204ENST00000577197 RRP12Q5JTH9 1297 aaKnown RBP14.57□□□□□ -0.08
TSEN54-204ENST00000577197 TATDN1Q6P1N9 297 aa14.57□□□□□ -0.08
TSEN54-204ENST00000577197 ENAHQ8N8S7 591 aaPredicted RBP14.57□□□□□ -0.08
TSEN54-204ENST00000577197 CLEC11AQ9Y240 323 aa14.57□□□□□ -0.08
TSEN54-204ENST00000577197 GOLGA8BA8MQT2 603 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 ZBTB43O43298 467 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 TSPY3P0CV98 308 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 TSPY8P0CW00 308 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 CACNB3P54284 484 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 ST3GAL1Q11201 340 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 SCRN1Q12765 414 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 IFIT1BQ5T764 474 aaKnown RBP14.56□□□□□ -0.08
TSEN54-204ENST00000577197 CLEC17AQ6ZS10 378 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 CCDC83Q8IWF9 413 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 SULF1Q8IWU6 871 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 HOOK2Q96ED9 719 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 LRRC2Q9BYS8 371 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 GINM1Q9NU53 330 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 RBM28Q9NW13 759 aaKnown RBP14.56□□□□□ -0.08
TSEN54-204ENST00000577197 SAP30BPQ9UHR5 308 aaKnown RBP14.56□□□□□ -0.08
TSEN54-204ENST00000577197 BRPF3Q9ULD4 1205 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 HPS5Q9UPZ3 1129 aa14.56□□□□□ -0.08
TSEN54-204ENST00000577197 ASTN2O75129 1339 aaPredicted RBP14.56□□□□□ -0.08
TSEN54-204ENST00000577197 TCP10L2B9ZVM9 353 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 KIF3CO14782 793 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 METAP2P50579 478 aaKnown RBP eCLIP14.55□□□□□ -0.08
TSEN54-204ENST00000577197 TFAP4Q01664 338 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 RAB3GAP1Q15042 981 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 NFXL1Q6ZNB6 911 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 NOL8Q76FK4 1167 aaKnown RBP14.55□□□□□ -0.08
TSEN54-204ENST00000577197 CDC37L1Q7L3B6 337 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 CHST3Q7LGC8 479 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 ZNF784Q8NCA9 323 aaPredicted RBP14.55□□□□□ -0.08
TSEN54-204ENST00000577197 DYNLL2Q96FJ2 89 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 INCENPQ9NQS7 918 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 STK36Q9NRP7 1315 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 CNTNAP1P78357 1384 aa14.55□□□□□ -0.08
TSEN54-204ENST00000577197 IGKV6D-41A0A0C4DH26 115 aa14.54□□□□□ -0.08
TSEN54-204ENST00000577197 PRDM1O75626 825 aa14.54□□□□□ -0.08
TSEN54-204ENST00000577197 SHMT1P34896 483 aa14.54□□□□□ -0.08
TSEN54-204ENST00000577197 RASA3Q14644 834 aa14.54□□□□□ -0.08
TSEN54-204ENST00000577197 CHADLQ6NUI6 762 aa14.54□□□□□ -0.08
TSEN54-204ENST00000577197 CATIPQ7Z7H3 387 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms